RNA–Protein interactions for RNA: ENST00000590834.5

RUNDC3A-205, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 2,373 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-205ENST00000590834 LRP6O75581 1613 aa27.5■■□□□ 1.99
RUNDC3A-205ENST00000590834 GCKRQ14397 625 aa27.49■■□□□ 1.99
RUNDC3A-205ENST00000590834 SDSP20132 328 aa27.48■■□□□ 1.99
RUNDC3A-205ENST00000590834 PLBD2Q8NHP8 589 aa27.48■■□□□ 1.99
RUNDC3A-205ENST00000590834 ATG3Q9NT62 314 aa27.48■■□□□ 1.99
RUNDC3A-205ENST00000590834 UBAP1LF5GYI3 381 aa27.47■■□□□ 1.99
RUNDC3A-205ENST00000590834 BCL9O00512 1426 aa27.46■■□□□ 1.99
RUNDC3A-205ENST00000590834 RHPN1Q8TCX5 695 aa27.46■■□□□ 1.99
RUNDC3A-205ENST00000590834 BICC1Q9H694 974 aaKnown RBP27.46■■□□□ 1.99
RUNDC3A-205ENST00000590834 IL1RAPL2Q9NP60 686 aa27.46■■□□□ 1.99
RUNDC3A-205ENST00000590834 THRAP3Q9Y2W1 955 aaKnown RBP27.46■■□□□ 1.99
RUNDC3A-205ENST00000590834 SLIT2O94813 1529 aa27.46■■□□□ 1.99
RUNDC3A-205ENST00000590834 MX1P20591 662 aa27.45■■□□□ 1.99
RUNDC3A-205ENST00000590834 TSHZ3Q63HK5 1081 aa27.45■■□□□ 1.98
RUNDC3A-205ENST00000590834 CDCA7Q9BWT1 371 aaPredicted RBP27.45■■□□□ 1.98
RUNDC3A-205ENST00000590834 AFDNP55196 1824 aaKnown RBP27.45■■□□□ 1.98
RUNDC3A-205ENST00000590834 NWD2Q9ULI1 1742 aa27.45■■□□□ 1.98
RUNDC3A-205ENST00000590834 TTLL7Q6ZT98 887 aa27.44■■□□□ 1.98
RUNDC3A-205ENST00000590834 KIF1BPQ96EK5 621 aa27.44■■□□□ 1.98
RUNDC3A-205ENST00000590834 DAXXQ9UER7 740 aaPredicted RBP27.44■■□□□ 1.98
RUNDC3A-205ENST00000590834 NUP188Q5SRE5 1749 aa27.43■■□□□ 1.98
RUNDC3A-205ENST00000590834 VSIG10Q8N0Z9 540 aa27.43■■□□□ 1.98
RUNDC3A-205ENST00000590834 STAP2Q9UGK3 403 aa27.43■■□□□ 1.98
RUNDC3A-205ENST00000590834 TUBGCP6Q96RT7 1819 aa27.43■■□□□ 1.98
RUNDC3A-205ENST00000590834 RBM25P49756 843 aaKnown RBP27.43■■□□□ 1.98
RUNDC3A-205ENST00000590834 SPATA31A5Q5VU36 1347 aa27.43■■□□□ 1.98
RUNDC3A-205ENST00000590834 SPATA31A7Q8IWB4 1347 aa27.43■■□□□ 1.98
RUNDC3A-205ENST00000590834 ATP5J2-PTCD1G3V325 749 aa27.42■■□□□ 1.98
RUNDC3A-205ENST00000590834 HSP90AB4PQ58FF6 505 aa27.42■■□□□ 1.98
RUNDC3A-205ENST00000590834 DNAJC10Q8IXB1 793 aa27.41■■□□□ 1.98
RUNDC3A-205ENST00000590834 PA2G4Q9UQ80 394 aaKnown RBP27.41■■□□□ 1.98
RUNDC3A-205ENST00000590834 EPHA10Q5JZY3 1008 aa27.4■■□□□ 1.98
RUNDC3A-205ENST00000590834 DOT1LQ8TEK3 1739 aa27.39■■□□□ 1.98
RUNDC3A-205ENST00000590834 DDB1Q16531 1140 aa27.39■■□□□ 1.98
RUNDC3A-205ENST00000590834 NUTM1Q86Y26 1132 aa27.39■■□□□ 1.98
RUNDC3A-205ENST00000590834 RBM42Q9BTD8 480 aaKnown RBP27.39■■□□□ 1.98
RUNDC3A-205ENST00000590834 TEX13AQ9BXU3 409 aaPredicted RBP27.39■■□□□ 1.98
RUNDC3A-205ENST00000590834 JARID2Q92833 1246 aaPredicted RBP27.38■■□□□ 1.97
RUNDC3A-205ENST00000590834 AOX1Q06278 1338 aa27.37■■□□□ 1.97
RUNDC3A-205ENST00000590834 SYTL4Q96C24 671 aaPredicted RBP27.37■■□□□ 1.97
RUNDC3A-205ENST00000590834 BECN1Q14457 450 aa27.37■■□□□ 1.97
RUNDC3A-205ENST00000590834 SLC4A9Q96Q91 983 aa27.37■■□□□ 1.97
RUNDC3A-205ENST00000590834 COL15A1P39059 1388 aa27.36■■□□□ 1.97
RUNDC3A-205ENST00000590834 PRIM1P49642 420 aaKnown RBP27.36■■□□□ 1.97
RUNDC3A-205ENST00000590834 CASP7P55210 303 aa27.36■■□□□ 1.97
RUNDC3A-205ENST00000590834 OS9Q13438 667 aaPredicted RBP27.36■■□□□ 1.97
RUNDC3A-205ENST00000590834 UBE3BQ7Z3V4 1068 aa27.36■■□□□ 1.97
RUNDC3A-205ENST00000590834 ZBTB3Q9H5J0 574 aa27.36■■□□□ 1.97
RUNDC3A-205ENST00000590834 A0A087WZG4 1122 aa27.36■■□□□ 1.97
RUNDC3A-205ENST00000590834 KAT6BQ8WYB5 2073 aa27.35■■□□□ 1.97
RUNDC3A-205ENST00000590834 BARGINQ6ZT62 677 aa27.35■■□□□ 1.97
RUNDC3A-205ENST00000590834 CCDC9Q9Y3X0 531 aaKnown RBP27.35■■□□□ 1.97
RUNDC3A-205ENST00000590834 TBC1D2Q9BYX2 928 aa27.34■■□□□ 1.97
RUNDC3A-205ENST00000590834 STARD3NLO95772 234 aa27.34■■□□□ 1.97
RUNDC3A-205ENST00000590834 MARCH10Q8NA82 808 aaPredicted RBP27.34■■□□□ 1.97
RUNDC3A-205ENST00000590834 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.34■■□□□ 1.97
RUNDC3A-205ENST00000590834 JCADQ9P266 1359 aa27.33■■□□□ 1.97
RUNDC3A-205ENST00000590834 CASC1Q6TDU7 716 aa27.33■■□□□ 1.97
RUNDC3A-205ENST00000590834 ERC1Q8IUD2 1116 aa27.33■■□□□ 1.97
RUNDC3A-205ENST00000590834 RABL6Q3YEC7 729 aaPredicted RBP27.33■■□□□ 1.96
RUNDC3A-205ENST00000590834 TJP1Q07157 1748 aa27.32■■□□□ 1.96
RUNDC3A-205ENST00000590834 EIF5BO60841 1220 aaKnown RBP27.32■■□□□ 1.96
RUNDC3A-205ENST00000590834 UNC5CLQ8IV45 518 aa27.32■■□□□ 1.96
RUNDC3A-205ENST00000590834 PI4K2BQ8TCG2 481 aa27.32■■□□□ 1.96
RUNDC3A-205ENST00000590834 KIF2CQ99661 725 aa27.32■■□□□ 1.96
RUNDC3A-205ENST00000590834 H7C1W4 665 aa27.31■■□□□ 1.96
RUNDC3A-205ENST00000590834 CWC25Q9NXE8 425 aaPredicted RBP27.31■■□□□ 1.96
RUNDC3A-205ENST00000590834 SASH1O94885 1247 aa27.3■■□□□ 1.96
RUNDC3A-205ENST00000590834 CYP19A1P11511 503 aaPredicted RBP27.3■■□□□ 1.96
RUNDC3A-205ENST00000590834 CLASRPQ8N2M8 674 aaKnown RBP27.3■■□□□ 1.96
RUNDC3A-205ENST00000590834 KLHDC4Q8TBB5 520 aa27.3■■□□□ 1.96
RUNDC3A-205ENST00000590834 ZNF330Q9Y3S2 320 aaPredicted RBP27.3■■□□□ 1.96
RUNDC3A-205ENST00000590834 USP42Q9H9J4 1324 aaKnown RBP27.3■■□□□ 1.96
RUNDC3A-205ENST00000590834 BCL9LQ86UU0 1499 aa27.3■■□□□ 1.96
RUNDC3A-205ENST00000590834 C8orf37Q96NL8 207 aa27.29■■□□□ 1.96
RUNDC3A-205ENST00000590834 RFX5P48382 616 aaPredicted RBP27.29■■□□□ 1.96
RUNDC3A-205ENST00000590834 G3BP1Q13283 466 aaKnown RBP eCLIP27.29■■□□□ 1.96
RUNDC3A-205ENST00000590834 CCDC191Q8NCU4 936 aa27.29■■□□□ 1.96
RUNDC3A-205ENST00000590834 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.29■■□□□ 1.96
RUNDC3A-205ENST00000590834 TRIM6-TRIM34B2RNG4 842 aa27.28■■□□□ 1.96
RUNDC3A-205ENST00000590834 RILPL2Q969X0 211 aa27.28■■□□□ 1.96
RUNDC3A-205ENST00000590834 USP26Q9BXU7 913 aa27.28■■□□□ 1.96
RUNDC3A-205ENST00000590834 ACSBG1Q96GR2 724 aa27.27■■□□□ 1.96
RUNDC3A-205ENST00000590834 SIL1Q9H173 461 aa27.27■■□□□ 1.96
RUNDC3A-205ENST00000590834 NGLY1Q96IV0 654 aa27.27■■□□□ 1.96
RUNDC3A-205ENST00000590834 ISCA1Q9BUE6 129 aa27.27■■□□□ 1.96
RUNDC3A-205ENST00000590834 COPRSQ9NQ92 184 aa27.27■■□□□ 1.96
RUNDC3A-205ENST00000590834 FOXO4P98177 505 aa27.26■■□□□ 1.95
RUNDC3A-205ENST00000590834 TCIRG1Q13488 830 aa27.26■■□□□ 1.95
RUNDC3A-205ENST00000590834 TTC41PQ6P2S7 1318 aa27.26■■□□□ 1.95
RUNDC3A-205ENST00000590834 PTPN12Q05209 780 aaKnown RBP27.25■■□□□ 1.95
RUNDC3A-205ENST00000590834 ERC2O15083 957 aa27.24■■□□□ 1.95
RUNDC3A-205ENST00000590834 VPS72Q15906 364 aa27.24■■□□□ 1.95
RUNDC3A-205ENST00000590834 RTL5Q5HYW3 569 aaPredicted RBP27.24■■□□□ 1.95
RUNDC3A-205ENST00000590834 KIF6Q6ZMV9 814 aa27.24■■□□□ 1.95
RUNDC3A-205ENST00000590834 ZBTB1Q9Y2K1 713 aa27.24■■□□□ 1.95
RUNDC3A-205ENST00000590834 CHMLP26374 656 aa27.24■■□□□ 1.95
RUNDC3A-205ENST00000590834 FAM98CQ17RN3 349 aaKnown RBP27.23■■□□□ 1.95
RUNDC3A-205ENST00000590834 LMBR1LQ6UX01 489 aa27.23■■□□□ 1.95
RUNDC3A-205ENST00000590834 AACSQ86V21 672 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms