RNA–Protein interactions for RNA: ENST00000590520.5

GHDC-211, Transcript of GH3 domain containing, humanhuman

TSL 3

Gene GHDC, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-211ENST00000590520 CNKSR1Q969H4 720 aa20.31■□□□□ 0.84
GHDC-211ENST00000590520 SETDB2Q96T68 719 aa20.31■□□□□ 0.84
GHDC-211ENST00000590520 SCN4AP35499 1836 aa20.31■□□□□ 0.84
GHDC-211ENST00000590520 CHADLQ6NUI6 762 aa20.29■□□□□ 0.84
GHDC-211ENST00000590520 PRPF40BQ6NWY9 871 aaKnown RBP20.29■□□□□ 0.84
GHDC-211ENST00000590520 A1BGP04217 495 aa20.28■□□□□ 0.84
GHDC-211ENST00000590520 SRGNP10124 158 aa20.28■□□□□ 0.84
GHDC-211ENST00000590520 DZIP3Q86Y13 1208 aaKnown RBP20.28■□□□□ 0.84
GHDC-211ENST00000590520 MASTLQ96GX5 879 aa20.28■□□□□ 0.84
GHDC-211ENST00000590520 CREBZFQ9NS37 354 aa20.28■□□□□ 0.84
GHDC-211ENST00000590520 BTBD11A6QL63 1104 aa20.26■□□□□ 0.83
GHDC-211ENST00000590520 IQCA1LA6NCM1 817 aa20.25■□□□□ 0.83
GHDC-211ENST00000590520 DDNO94850 711 aaPredicted RBP20.25■□□□□ 0.83
GHDC-211ENST00000590520 ZNF652Q9Y2D9 606 aa20.25■□□□□ 0.83
GHDC-211ENST00000590520 LAMB4A4D0S4 1761 aa20.25■□□□□ 0.83
GHDC-211ENST00000590520 KCNQ3O43525 872 aa20.24■□□□□ 0.83
GHDC-211ENST00000590520 PRKAR2BP31323 418 aa20.24■□□□□ 0.83
GHDC-211ENST00000590520 CCDC93Q567U6 631 aa20.24■□□□□ 0.83
GHDC-211ENST00000590520 NBPF5PQ86XG9 351 aaPredicted RBP20.24■□□□□ 0.83
GHDC-211ENST00000590520 POTEIP0CG38 1075 aa20.23■□□□□ 0.83
GHDC-211ENST00000590520 POTEJP0CG39 1038 aa20.23■□□□□ 0.83
GHDC-211ENST00000590520 CLEC4GQ6UXB4 293 aa20.23■□□□□ 0.83
GHDC-211ENST00000590520 L3MBTL3Q96JM7 780 aaPredicted RBP20.23■□□□□ 0.83
GHDC-211ENST00000590520 RSPH6AQ9H0K4 717 aa20.23■□□□□ 0.83
GHDC-211ENST00000590520 MKRN1Q9UHC7 482 aaKnown RBP20.23■□□□□ 0.83
GHDC-211ENST00000590520 LDHDQ86WU2 507 aa20.22■□□□□ 0.83
GHDC-211ENST00000590520 CNTNAP1P78357 1384 aa20.21■□□□□ 0.83
GHDC-211ENST00000590520 ADAMTSL1Q8N6G6 1762 aa20.21■□□□□ 0.83
GHDC-211ENST00000590520 PIP4K2AP48426 406 aaPredicted RBP20.21■□□□□ 0.83
GHDC-211ENST00000590520 CNGB1Q14028 1251 aaPredicted RBP20.21■□□□□ 0.83
GHDC-211ENST00000590520 PHACTR3Q96KR7 559 aa20.21■□□□□ 0.83
GHDC-211ENST00000590520 CFAP53Q96M91 514 aa20.21■□□□□ 0.83
GHDC-211ENST00000590520 RGL2O15211 777 aa20.2■□□□□ 0.82
GHDC-211ENST00000590520 SNRPA1P09661 255 aaKnown RBP20.2■□□□□ 0.82
GHDC-211ENST00000590520 NPR1P16066 1061 aa20.2■□□□□ 0.82
GHDC-211ENST00000590520 C7orf43Q8WVR3 580 aa20.2■□□□□ 0.82
GHDC-211ENST00000590520 TAF1DQ9H5J8 278 aaPredicted RBP20.2■□□□□ 0.82
GHDC-211ENST00000590520 USP16Q9Y5T5 823 aa20.2■□□□□ 0.82
GHDC-211ENST00000590520 PASKQ96RG2 1323 aa20.2■□□□□ 0.82
GHDC-211ENST00000590520 FKBP4Q02790 459 aaKnown RBP eCLIP20.19■□□□□ 0.82
GHDC-211ENST00000590520 PRAMEF22A3QJZ6 481 aa20.18■□□□□ 0.82
GHDC-211ENST00000590520 RTF1Q92541 710 aaKnown RBP20.18■□□□□ 0.82
GHDC-211ENST00000590520 ZNF541Q9H0D2 1346 aa20.18■□□□□ 0.82
GHDC-211ENST00000590520 KLRG2A4D1S0 409 aaPredicted RBP20.17■□□□□ 0.82
GHDC-211ENST00000590520 NIP7Q9Y221 180 aaKnown RBP eCLIP20.17■□□□□ 0.82
GHDC-211ENST00000590520 NUDCQ9Y266 331 aa20.17■□□□□ 0.82
GHDC-211ENST00000590520 TPTE2Q6XPS3 522 aa20.16■□□□□ 0.82
GHDC-211ENST00000590520 ZNF277Q9NRM2 450 aaPredicted RBP20.16■□□□□ 0.82
GHDC-211ENST00000590520 MCM10Q7L590 875 aa20.15■□□□□ 0.82
GHDC-211ENST00000590520 RTKN2Q8IZC4 609 aa20.15■□□□□ 0.82
GHDC-211ENST00000590520 HACL1Q9UJ83 578 aa20.15■□□□□ 0.82
GHDC-211ENST00000590520 KDM3BQ7LBC6 1761 aa20.14■□□□□ 0.81
GHDC-211ENST00000590520 TMEM88BA6NKF7 163 aa20.14■□□□□ 0.81
GHDC-211ENST00000590520 NBPF26B4DH59 902 aa20.14■□□□□ 0.81
GHDC-211ENST00000590520 FOXN1O15353 648 aa20.14■□□□□ 0.81
GHDC-211ENST00000590520 EAPPQ56P03 285 aaPredicted RBP20.14■□□□□ 0.81
GHDC-211ENST00000590520 NBPF10Q6P3W6 841 aaKnown RBP20.14■□□□□ 0.81
GHDC-211ENST00000590520 NBPF15Q8N660 670 aa20.14■□□□□ 0.81
GHDC-211ENST00000590520 NUP98P52948 1817 aa20.13■□□□□ 0.81
GHDC-211ENST00000590520 SNED1Q8TER0 1413 aa20.13■□□□□ 0.81
GHDC-211ENST00000590520 U2AF1L5P0DN76 240 aaPredicted RBP20.13■□□□□ 0.81
GHDC-211ENST00000590520 U2AF1Q01081 240 aaKnown RBP eCLIP20.13■□□□□ 0.81
GHDC-211ENST00000590520 AIDAQ96BJ3 306 aa20.13■□□□□ 0.81
GHDC-211ENST00000590520 DLG5Q8TDM6 1919 aa20.12■□□□□ 0.81
GHDC-211ENST00000590520 IARSP41252 1262 aaKnown RBP20.12■□□□□ 0.81
GHDC-211ENST00000590520 OLFM4Q6UX06 510 aa20.12■□□□□ 0.81
GHDC-211ENST00000590520 PRDM10Q9NQV6 1147 aa20.12■□□□□ 0.81
GHDC-211ENST00000590520 ABCC12Q96J65 1359 aa20.11■□□□□ 0.81
GHDC-211ENST00000590520 RNF123Q5XPI4 1314 aa20.11■□□□□ 0.81
GHDC-211ENST00000590520 FAM177BA6PVY3 158 aa20.11■□□□□ 0.81
GHDC-211ENST00000590520 HTATSF1O43719 755 aaKnown RBP20.11■□□□□ 0.81
GHDC-211ENST00000590520 ITGBL1O95965 494 aaPredicted RBP20.11■□□□□ 0.81
GHDC-211ENST00000590520 ALDH1B1P30837 517 aa20.11■□□□□ 0.81
GHDC-211ENST00000590520 EPHX2P34913 555 aa20.11■□□□□ 0.81
GHDC-211ENST00000590520 RIC1Q4ADV7 1423 aa20.1■□□□□ 0.81
GHDC-211ENST00000590520 FZD9O00144 591 aa20.1■□□□□ 0.81
GHDC-211ENST00000590520 GTF2E1P29083 439 aaPredicted RBP20.1■□□□□ 0.81
GHDC-211ENST00000590520 CTCFP49711 727 aaPredicted RBP20.1■□□□□ 0.81
GHDC-211ENST00000590520 VEGFBP49765 207 aa20.1■□□□□ 0.81
GHDC-211ENST00000590520 DCTN1Q14203 1278 aa20.1■□□□□ 0.81
GHDC-211ENST00000590520 PNMA8AQ86V59 439 aaPredicted RBP20.1■□□□□ 0.81
GHDC-211ENST00000590520 CLEC11AQ9Y240 323 aa20.1■□□□□ 0.81
GHDC-211ENST00000590520 HLFQ16534 295 aa20.09■□□□□ 0.81
GHDC-211ENST00000590520 GPC2Q8N158 579 aa20.09■□□□□ 0.81
GHDC-211ENST00000590520 PSMD1Q99460 953 aa20.09■□□□□ 0.81
GHDC-211ENST00000590520 NYXQ9GZU5 481 aa20.09■□□□□ 0.81
GHDC-211ENST00000590520 IBTKQ9P2D0 1353 aaPredicted RBP20.08■□□□□ 0.81
GHDC-211ENST00000590520 CRY2Q49AN0 593 aa20.08■□□□□ 0.81
GHDC-211ENST00000590520 SYNE4Q8N205 404 aa20.08■□□□□ 0.81
GHDC-211ENST00000590520 THSD7BQ9C0I4 1608 aa20.08■□□□□ 0.8
GHDC-211ENST00000590520 LTBP1Q14766 1721 aa20.07■□□□□ 0.8
GHDC-211ENST00000590520 PPP2R1AP30153 589 aa20.07■□□□□ 0.8
GHDC-211ENST00000590520 JDP2Q8WYK2 163 aa20.07■□□□□ 0.8
GHDC-211ENST00000590520 COL4A5P29400 1685 aa20.07■□□□□ 0.8
GHDC-211ENST00000590520 RASSF10A6NK89 507 aa20.06■□□□□ 0.8
GHDC-211ENST00000590520 TAF7Q15545 349 aaPredicted RBP20.06■□□□□ 0.8
GHDC-211ENST00000590520 CC2D2BQ6DHV5 1058 aa20.06■□□□□ 0.8
GHDC-211ENST00000590520 TRPM7Q96QT4 1865 aa20.05■□□□□ 0.8
GHDC-211ENST00000590520 ERVV-1B6SEH8 477 aa20.05■□□□□ 0.8
GHDC-211ENST00000590520 MAP1SQ66K74 1059 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms