RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 FLIIQ13045 1269 aa15.42■□□□□ 0.06
APOC1-206ENST00000590334 BCL2L13Q9BXK5 485 aa15.42■□□□□ 0.06
APOC1-206ENST00000590334 ZNF330Q9Y3S2 320 aaPredicted RBP15.42■□□□□ 0.06
APOC1-206ENST00000590334 PTPRCP08575 1304 aa15.42■□□□□ 0.06
APOC1-206ENST00000590334 BCAR3O75815 825 aa15.41■□□□□ 0.06
APOC1-206ENST00000590334 KIF6Q6ZMV9 814 aa15.41■□□□□ 0.06
APOC1-206ENST00000590334 PLBD2Q8NHP8 589 aa15.41■□□□□ 0.06
APOC1-206ENST00000590334 TBC1D2BQ9UPU7 963 aa15.41■□□□□ 0.06
APOC1-206ENST00000590334 KIF16BQ96L93 1317 aa15.41■□□□□ 0.06
APOC1-206ENST00000590334 ADCY9O60503 1353 aa15.4■□□□□ 0.06
APOC1-206ENST00000590334 ZPR1O75312 459 aa15.4■□□□□ 0.06
APOC1-206ENST00000590334 DDX58O95786 925 aaKnown RBP15.4■□□□□ 0.06
APOC1-206ENST00000590334 AIMP1Q12904 312 aaKnown RBP15.4■□□□□ 0.06
APOC1-206ENST00000590334 R3HDM1Q15032 1099 aaKnown RBP15.4■□□□□ 0.06
APOC1-206ENST00000590334 CLEC4GQ6UXB4 293 aa15.4■□□□□ 0.06
APOC1-206ENST00000590334 ANKRD13DQ6ZTN6 518 aa15.4■□□□□ 0.06
APOC1-206ENST00000590334 SLC16A10Q8TF71 515 aa15.4■□□□□ 0.06
APOC1-206ENST00000590334 ARHGAP45Q92619 1136 aa15.4■□□□□ 0.06
APOC1-206ENST00000590334 GYS1P13807 737 aa15.39■□□□□ 0.05
APOC1-206ENST00000590334 USPL1Q5W0Q7 1092 aa15.39■□□□□ 0.05
APOC1-206ENST00000590334 KSR2Q6VAB6 950 aa15.39■□□□□ 0.05
APOC1-206ENST00000590334 GIGYF2Q6Y7W6 1299 aaKnown RBP15.39■□□□□ 0.05
APOC1-206ENST00000590334 PDGFDQ9GZP0 370 aaPredicted RBP15.39■□□□□ 0.05
APOC1-206ENST00000590334 BCL2L12Q9HB09 334 aa15.39■□□□□ 0.05
APOC1-206ENST00000590334 SRP68Q9UHB9 627 aaKnown RBP15.39■□□□□ 0.05
APOC1-206ENST00000590334 ATP10DQ9P241 1426 aa15.39■□□□□ 0.05
APOC1-206ENST00000590334 NRXN2Q9P2S2 1712 aa15.39■□□□□ 0.05
APOC1-206ENST00000590334 PXDNLA1KZ92 1463 aa15.39■□□□□ 0.05
APOC1-206ENST00000590334 FKBP5Q13451 457 aaPredicted RBP15.38■□□□□ 0.05
APOC1-206ENST00000590334 ZBTB3Q9H5J0 574 aa15.38■□□□□ 0.05
APOC1-206ENST00000590334 NOB1Q9ULX3 412 aaKnown RBP15.38■□□□□ 0.05
APOC1-206ENST00000590334 PI4KAP2A4QPH2 592 aa15.37■□□□□ 0.05
APOC1-206ENST00000590334 MSH5O43196 834 aa15.37■□□□□ 0.05
APOC1-206ENST00000590334 HLFQ16534 295 aa15.37■□□□□ 0.05
APOC1-206ENST00000590334 PI4KAP1Q8N8J0 262 aa15.37■□□□□ 0.05
APOC1-206ENST00000590334 ARXQ96QS3 562 aa15.37■□□□□ 0.05
APOC1-206ENST00000590334 ZNF652Q9Y2D9 606 aa15.37■□□□□ 0.05
APOC1-206ENST00000590334 PSDA5PKW4 1024 aaPredicted RBP15.36■□□□□ 0.05
APOC1-206ENST00000590334 IPO8O15397 1037 aaKnown RBP15.36■□□□□ 0.05
APOC1-206ENST00000590334 RIC3Q7Z5B4 369 aa15.36■□□□□ 0.05
APOC1-206ENST00000590334 NLGN1Q8N2Q7 840 aa15.36■□□□□ 0.05
APOC1-206ENST00000590334 METTL22Q9BUU2 404 aaPredicted RBP15.36■□□□□ 0.05
APOC1-206ENST00000590334 MAP3K2Q9Y2U5 619 aa15.36■□□□□ 0.05
APOC1-206ENST00000590334 TCIRG1Q13488 830 aa15.35■□□□□ 0.05
APOC1-206ENST00000590334 FKBP8Q14318 412 aa15.35■□□□□ 0.05
APOC1-206ENST00000590334 HSP90AB3PQ58FF7 597 aa15.35■□□□□ 0.05
APOC1-206ENST00000590334 ZNF34Q8IZ26 560 aa15.35■□□□□ 0.05
APOC1-206ENST00000590334 API5Q9BZZ5 524 aaKnown RBP15.35■□□□□ 0.05
APOC1-206ENST00000590334 IBTKQ9P2D0 1353 aaPredicted RBP15.35■□□□□ 0.05
APOC1-206ENST00000590334 LAMB2P55268 1798 aa15.34■□□□□ 0.05
APOC1-206ENST00000590334 TM4SF1P30408 202 aa15.34■□□□□ 0.05
APOC1-206ENST00000590334 TRIM28Q13263 835 aaKnown RBP15.34■□□□□ 0.05
APOC1-206ENST00000590334 ZKSCAN2Q63HK3 967 aa15.34■□□□□ 0.05
APOC1-206ENST00000590334 ATF7IPQ6VMQ6 1270 aa15.34■□□□□ 0.05
APOC1-206ENST00000590334 DNAAF4Q8WXU2 420 aa15.34■□□□□ 0.05
APOC1-206ENST00000590334 KIF13BQ9NQT8 1826 aa15.33■□□□□ 0.05
APOC1-206ENST00000590334 F6X3S4 739 aa15.33■□□□□ 0.04
APOC1-206ENST00000590334 TRIM27P14373 513 aa15.33■□□□□ 0.04
APOC1-206ENST00000590334 TBC1D9BQ66K14 1250 aa15.33■□□□□ 0.04
APOC1-206ENST00000590334 FRAT1Q92837 279 aaPredicted RBP15.33■□□□□ 0.04
APOC1-206ENST00000590334 ISCA1Q9BUE6 129 aa15.33■□□□□ 0.04
APOC1-206ENST00000590334 MTFR1LQ9H019 292 aa15.33■□□□□ 0.04
APOC1-206ENST00000590334 ABCC4O15439 1325 aa15.33■□□□□ 0.04
APOC1-206ENST00000590334 RNF123Q5XPI4 1314 aa15.33■□□□□ 0.04
APOC1-206ENST00000590334 DDX60Q8IY21 1712 aaKnown RBP15.32■□□□□ 0.04
APOC1-206ENST00000590334 NFIXQ14938 502 aa15.32■□□□□ 0.04
APOC1-206ENST00000590334 UBN2Q6ZU65 1347 aa15.32■□□□□ 0.04
APOC1-206ENST00000590334 CARMIL3Q8ND23 1372 aa15.32■□□□□ 0.04
APOC1-206ENST00000590334 IGKV5-2P06315 115 aa15.31■□□□□ 0.04
APOC1-206ENST00000590334 NEXNQ0ZGT2 675 aa15.31■□□□□ 0.04
APOC1-206ENST00000590334 BEND3Q5T5X7 828 aa15.31■□□□□ 0.04
APOC1-206ENST00000590334 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.31■□□□□ 0.04
APOC1-206ENST00000590334 LINS1Q8NG48 757 aa15.31■□□□□ 0.04
APOC1-206ENST00000590334 SETDB2Q96T68 719 aa15.31■□□□□ 0.04
APOC1-206ENST00000590334 MYD88Q99836 296 aa15.31■□□□□ 0.04
APOC1-206ENST00000590334 ANKRD31Q8N7Z5 1873 aa15.31■□□□□ 0.04
APOC1-206ENST00000590334 MYH3P11055 1940 aa15.31■□□□□ 0.04
APOC1-206ENST00000590334 ZBTB7AO95365 584 aa15.3■□□□□ 0.04
APOC1-206ENST00000590334 PARP10Q53GL7 1025 aa15.3■□□□□ 0.04
APOC1-206ENST00000590334 MSL1Q68DK7 614 aa15.3■□□□□ 0.04
APOC1-206ENST00000590334 NLRP10Q86W26 655 aa15.3■□□□□ 0.04
APOC1-206ENST00000590334 CCDC191Q8NCU4 936 aa15.3■□□□□ 0.04
APOC1-206ENST00000590334 NIP7Q9Y221 180 aaKnown RBP eCLIP15.3■□□□□ 0.04
APOC1-206ENST00000590334 LRP5O75197 1615 aa15.29■□□□□ 0.04
APOC1-206ENST00000590334 NEURL1BA8MQ27 555 aa15.29■□□□□ 0.04
APOC1-206ENST00000590334 ATP5J2-PTCD1G3V325 749 aa15.29■□□□□ 0.04
APOC1-206ENST00000590334 POLRMTO00411 1230 aaKnown RBP15.29■□□□□ 0.04
APOC1-206ENST00000590334 ALDH1L1O75891 902 aa15.29■□□□□ 0.04
APOC1-206ENST00000590334 CENPBP07199 599 aaPredicted RBP15.29■□□□□ 0.04
APOC1-206ENST00000590334 MMP10P09238 476 aa15.29■□□□□ 0.04
APOC1-206ENST00000590334 MS4A1P11836 297 aa15.29■□□□□ 0.04
APOC1-206ENST00000590334 CCT4P50991 539 aaKnown RBP15.29■□□□□ 0.04
APOC1-206ENST00000590334 RRP1P56182 461 aaKnown RBP15.29■□□□□ 0.04
APOC1-206ENST00000590334 DDR1Q08345 913 aa15.29■□□□□ 0.04
APOC1-206ENST00000590334 INTS3Q68E01 1043 aaKnown RBP15.29■□□□□ 0.04
APOC1-206ENST00000590334 SGIP1Q9BQI5 828 aa15.29■□□□□ 0.04
APOC1-206ENST00000590334 TNNQ9UQP3 1299 aa15.29■□□□□ 0.04
APOC1-206ENST00000590334 PLIN1O60240 522 aa15.28■□□□□ 0.04
APOC1-206ENST00000590334 GPTP24298 496 aa15.28■□□□□ 0.04
APOC1-206ENST00000590334 PDE3AQ14432 1141 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms