RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 PRPF40BQ6NWY9 871 aaKnown RBP18.64■□□□□ 0.57
SF3A2-205ENST00000590034 CFAP53Q96M91 514 aa18.64■□□□□ 0.57
SF3A2-205ENST00000590034 LTBP3Q9NS15 1303 aa18.64■□□□□ 0.57
SF3A2-205ENST00000590034 PPP2R1AP30153 589 aa18.63■□□□□ 0.57
SF3A2-205ENST00000590034 DCTN1Q14203 1278 aa18.63■□□□□ 0.57
SF3A2-205ENST00000590034 ERFEQ4G0M1 354 aa18.63■□□□□ 0.57
SF3A2-205ENST00000590034 COL13A1Q5TAT6 717 aaPredicted RBP18.63■□□□□ 0.57
SF3A2-205ENST00000590034 STYK1Q6J9G0 422 aa18.63■□□□□ 0.57
SF3A2-205ENST00000590034 TAOK3Q9H2K8 898 aa18.63■□□□□ 0.57
SF3A2-205ENST00000590034 LAMB4A4D0S4 1761 aa18.63■□□□□ 0.57
SF3A2-205ENST00000590034 NBPF26B4DH59 902 aa18.62■□□□□ 0.57
SF3A2-205ENST00000590034 U2AF1L5P0DN76 240 aaPredicted RBP18.62■□□□□ 0.57
SF3A2-205ENST00000590034 ST5P78524 1137 aa18.62■□□□□ 0.57
SF3A2-205ENST00000590034 U2AF1Q01081 240 aaKnown RBP eCLIP18.62■□□□□ 0.57
SF3A2-205ENST00000590034 NBPF10Q6P3W6 841 aaKnown RBP18.62■□□□□ 0.57
SF3A2-205ENST00000590034 NPM2Q86SE8 214 aaKnown RBP18.62■□□□□ 0.57
SF3A2-205ENST00000590034 NBPF15Q8N660 670 aa18.62■□□□□ 0.57
SF3A2-205ENST00000590034 CNKSR1Q969H4 720 aa18.62■□□□□ 0.57
SF3A2-205ENST00000590034 DLG5Q8TDM6 1919 aa18.62■□□□□ 0.57
SF3A2-205ENST00000590034 NPHP1O15259 732 aa18.6■□□□□ 0.57
SF3A2-205ENST00000590034 SNRPA1P09661 255 aaKnown RBP18.6■□□□□ 0.57
SF3A2-205ENST00000590034 DPY19L2Q6NUT2 758 aa18.6■□□□□ 0.57
SF3A2-205ENST00000590034 MASTLQ96GX5 879 aa18.6■□□□□ 0.57
SF3A2-205ENST00000590034 NUDCQ9Y266 331 aa18.6■□□□□ 0.57
SF3A2-205ENST00000590034 POTEIP0CG38 1075 aa18.59■□□□□ 0.57
SF3A2-205ENST00000590034 POTEJP0CG39 1038 aa18.59■□□□□ 0.57
SF3A2-205ENST00000590034 CLEC4GQ6UXB4 293 aa18.59■□□□□ 0.57
SF3A2-205ENST00000590034 NBPF5PQ86XG9 351 aaPredicted RBP18.59■□□□□ 0.57
SF3A2-205ENST00000590034 C7orf43Q8WVR3 580 aa18.59■□□□□ 0.57
SF3A2-205ENST00000590034 RTF1Q92541 710 aaKnown RBP18.59■□□□□ 0.57
SF3A2-205ENST00000590034 KDM3BQ7LBC6 1761 aa18.58■□□□□ 0.57
SF3A2-205ENST00000590034 DDNO94850 711 aaPredicted RBP18.58■□□□□ 0.56
SF3A2-205ENST00000590034 KLRG2A4D1S0 409 aaPredicted RBP18.57■□□□□ 0.56
SF3A2-205ENST00000590034 ZNF652Q9Y2D9 606 aa18.57■□□□□ 0.56
SF3A2-205ENST00000590034 SCN4AP35499 1836 aa18.56■□□□□ 0.56
SF3A2-205ENST00000590034 HLFQ16534 295 aa18.56■□□□□ 0.56
SF3A2-205ENST00000590034 OLFM4Q6UX06 510 aa18.56■□□□□ 0.56
SF3A2-205ENST00000590034 MIS18AQ9NYP9 233 aa18.56■□□□□ 0.56
SF3A2-205ENST00000590034 NIP7Q9Y221 180 aaKnown RBP eCLIP18.56■□□□□ 0.56
SF3A2-205ENST00000590034 NUP98P52948 1817 aa18.56■□□□□ 0.56
SF3A2-205ENST00000590034 HTATSF1O43719 755 aaKnown RBP18.55■□□□□ 0.56
SF3A2-205ENST00000590034 NPR1P16066 1061 aa18.55■□□□□ 0.56
SF3A2-205ENST00000590034 SOGA3Q5TF21 947 aa18.55■□□□□ 0.56
SF3A2-205ENST00000590034 RGL2O15211 777 aa18.54■□□□□ 0.56
SF3A2-205ENST00000590034 HSPA1AP0DMV8 641 aaKnown RBP18.54■□□□□ 0.56
SF3A2-205ENST00000590034 HSPA1BP0DMV9 641 aaKnown RBP18.54■□□□□ 0.56
SF3A2-205ENST00000590034 CCDC93Q567U6 631 aa18.54■□□□□ 0.56
SF3A2-205ENST00000590034 CHADLQ6NUI6 762 aa18.54■□□□□ 0.56
SF3A2-205ENST00000590034 FAM177BA6PVY3 158 aa18.53■□□□□ 0.56
SF3A2-205ENST00000590034 TAF7Q15545 349 aaPredicted RBP18.53■□□□□ 0.56
SF3A2-205ENST00000590034 TPTE2Q6XPS3 522 aa18.53■□□□□ 0.56
SF3A2-205ENST00000590034 SNED1Q8TER0 1413 aa18.53■□□□□ 0.56
SF3A2-205ENST00000590034 ABCC12Q96J65 1359 aa18.53■□□□□ 0.56
SF3A2-205ENST00000590034 ZNF541Q9H0D2 1346 aa18.52■□□□□ 0.56
SF3A2-205ENST00000590034 L3MBTL3Q96JM7 780 aaPredicted RBP18.52■□□□□ 0.56
SF3A2-205ENST00000590034 ZNF277Q9NRM2 450 aaPredicted RBP18.52■□□□□ 0.56
SF3A2-205ENST00000590034 ADAMTSL1Q8N6G6 1762 aa18.52■□□□□ 0.55
SF3A2-205ENST00000590034 FKBP4Q02790 459 aaKnown RBP eCLIP18.51■□□□□ 0.55
SF3A2-205ENST00000590034 CREBZFQ9NS37 354 aa18.51■□□□□ 0.55
SF3A2-205ENST00000590034 TAF1DQ9H5J8 278 aaPredicted RBP18.5■□□□□ 0.55
SF3A2-205ENST00000590034 PASKQ96RG2 1323 aa18.49■□□□□ 0.55
SF3A2-205ENST00000590034 TNS4Q8IZW8 715 aa18.49■□□□□ 0.55
SF3A2-205ENST00000590034 PLEKHF1Q96S99 279 aa18.49■□□□□ 0.55
SF3A2-205ENST00000590034 THUMPD2Q9BTF0 503 aaKnown RBP18.49■□□□□ 0.55
SF3A2-205ENST00000590034 MKRN1Q9UHC7 482 aaKnown RBP18.49■□□□□ 0.55
SF3A2-205ENST00000590034 COL4A5P29400 1685 aa18.49■□□□□ 0.55
SF3A2-205ENST00000590034 IQCA1LA6NCM1 817 aa18.48■□□□□ 0.55
SF3A2-205ENST00000590034 CRY2Q49AN0 593 aa18.48■□□□□ 0.55
SF3A2-205ENST00000590034 NUTM1Q86Y26 1132 aa18.48■□□□□ 0.55
SF3A2-205ENST00000590034 NGEFQ8N5V2 710 aa18.48■□□□□ 0.55
SF3A2-205ENST00000590034 CAPN15O75808 1086 aa18.47■□□□□ 0.55
SF3A2-205ENST00000590034 EIF4A1P60842 406 aaKnown RBP18.47■□□□□ 0.55
SF3A2-205ENST00000590034 TTLL7Q6ZT98 887 aa18.47■□□□□ 0.55
SF3A2-205ENST00000590034 SLC51AQ86UW1 340 aa18.47■□□□□ 0.55
SF3A2-205ENST00000590034 LDHDQ86WU2 507 aa18.47■□□□□ 0.55
SF3A2-205ENST00000590034 MAP3K15Q6ZN16 1313 aa18.47■□□□□ 0.55
SF3A2-205ENST00000590034 UBN2Q6ZU65 1347 aa18.47■□□□□ 0.55
SF3A2-205ENST00000590034 RTKN2Q8IZC4 609 aa18.46■□□□□ 0.55
SF3A2-205ENST00000590034 CNTNAP1P78357 1384 aa18.45■□□□□ 0.54
SF3A2-205ENST00000590034 ERVV-1B6SEH8 477 aa18.45■□□□□ 0.54
SF3A2-205ENST00000590034 FZD9O00144 591 aa18.45■□□□□ 0.54
SF3A2-205ENST00000590034 ITGBL1O95965 494 aaPredicted RBP18.45■□□□□ 0.54
SF3A2-205ENST00000590034 GTF2E1P29083 439 aaPredicted RBP18.45■□□□□ 0.54
SF3A2-205ENST00000590034 ALDH1B1P30837 517 aa18.45■□□□□ 0.54
SF3A2-205ENST00000590034 IARSP41252 1262 aaKnown RBP18.45■□□□□ 0.54
SF3A2-205ENST00000590034 SYNE4Q8N205 404 aa18.45■□□□□ 0.54
SF3A2-205ENST00000590034 RRP7AQ9Y3A4 280 aaKnown RBP18.45■□□□□ 0.54
SF3A2-205ENST00000590034 RIC1Q4ADV7 1423 aa18.45■□□□□ 0.54
SF3A2-205ENST00000590034 LTBP1Q14766 1721 aa18.45■□□□□ 0.54
SF3A2-205ENST00000590034 RNF123Q5XPI4 1314 aa18.45■□□□□ 0.54
SF3A2-205ENST00000590034 GPTP24298 496 aa18.44■□□□□ 0.54
SF3A2-205ENST00000590034 NFE2L2Q16236 605 aa18.44■□□□□ 0.54
SF3A2-205ENST00000590034 PNISRQ8TF01 805 aaKnown RBP18.44■□□□□ 0.54
SF3A2-205ENST00000590034 IBTKQ9P2D0 1353 aaPredicted RBP18.43■□□□□ 0.54
SF3A2-205ENST00000590034 MYL6BP14649 208 aa18.43■□□□□ 0.54
SF3A2-205ENST00000590034 EPHX2P34913 555 aa18.43■□□□□ 0.54
SF3A2-205ENST00000590034 EAPPQ56P03 285 aaPredicted RBP18.43■□□□□ 0.54
SF3A2-205ENST00000590034 PSMD1Q99460 953 aa18.43■□□□□ 0.54
SF3A2-205ENST00000590034 NYXQ9GZU5 481 aa18.43■□□□□ 0.54
SF3A2-205ENST00000590034 ZBTB3Q9H5J0 574 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms