RNA–Protein interactions for RNA: ENST00000589759.1

ATP6V0A1-223, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-223	ENST00000589759	EFCAB13	Q8IY85	973 aa		6.11	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	GTF3C6	Q969F1	213 aa		6.11	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	SMARCE1	Q969G3	411 aa		6.11	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	C16orf45	Q96MC5	204 aa	Predicted RBP	6.11	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	KCND1	Q9NSA2	647 aa		6.11	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	ARGLU1	Q9NWB6	273 aa	Predicted RBP	6.11	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	MKRN1	Q9UHC7	482 aa	Known RBP	6.11	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	ZNF215	Q9UL58	517 aa	Predicted RBP	6.11	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	MAP3K4	Q9Y6R4	1608 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	ARHGEF5	Q12774	1597 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	PRAG1	Q86YV5	1406 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	KDM4F	A0A1W2PPD8	638 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759		H0YHG0	523 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	BRD1	O95696	1058 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	TPM1	P09493	284 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	NEFH	P12036	1026 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	RLBP1	P12271	317 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	SARNP	P82979	210 aa	Known RBP	6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	NUCB1	Q02818	461 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	OS9	Q13438	667 aa	Predicted RBP	6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	BIRC2	Q13490	618 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	PKP1	Q13835	747 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	PPP2R5A	Q15172	486 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	ZRSR1	Q15695	479 aa	Known RBP	6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	CASC1	Q6TDU7	716 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	NYAP1	Q6ZVC0	841 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	FILIP1	Q7Z7B0	1213 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	ILDR1	Q86SU0	546 aa	Predicted RBP	6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	CALR3	Q96L12	384 aa	Known RBP	6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	PSMD1	Q99460	953 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	FUCA2	Q9BTY2	467 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	FAM107B	Q9H098	131 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	MRVI1	Q9Y6F6	885 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	CHD2	O14647	1828 aa	Known RBP	6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	ABCA8	O94911	1581 aa		6.1	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	MED14	O60244	1454 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	ABCC5	O15440	1437 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	SPAG9	O60271	1321 aa	Known RBP	6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	EIF3CL	B5ME19	914 aa	Known RBP	6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	MAFG	O15525	162 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	NEMF	O60524	1076 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	CDC45	O75419	566 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	SMC2	O95347	1197 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	TUBB4A	P04350	444 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	HCLS1	P14317	486 aa	Predicted RBP	6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	MX1	P20591	662 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	PTGS1	P23219	599 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	CDC25B	P30305	580 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	ST5	P78524	1137 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	TPD52L1	Q16890	204 aa	Predicted RBP	6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	TMCO3	Q6UWJ1	677 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	LEKR1	Q6ZMV7	388 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	REXO1L1P	Q8IX06	675 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	MPND	Q8N594	471 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	RTF1	Q92541	710 aa	Known RBP	6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	EIF3C	Q99613	913 aa	Known RBP	6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	L2HGDH	Q9H9P8	463 aa		6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	SETD1B	Q9UPS6	1966 aa	Known RBP	6.09	□□□□□ -1.43
ATP6V0A1-223	ENST00000589759	ADGRL1	O94910	1474 aa		6.09	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	PLA2R1	Q13018	1463 aa		6.09	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	SHANK2	Q9UPX8	1470 aa		6.09	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	DISP3	Q9P2K9	1392 aa		6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759		A0A087WUV0	522 aa	Predicted RBP	6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	MPHOSPH10	O00566	681 aa	Known RBP	6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	CT47B1	P0C2W7	299 aa	Predicted RBP	6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	OAS2	P29728	719 aa	Known RBP	6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	E2F4	Q16254	413 aa		6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ZC3H12A	Q5D1E8	599 aa	Known RBP	6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	JAKMIP3	Q5VZ66	844 aa		6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ZSCAN25	Q6NSZ9	544 aa		6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	TBC1D9	Q6ZT07	1266 aa		6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	TADA2B	Q86TJ2	420 aa		6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ERC1	Q8IUD2	1116 aa		6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	BORCS6	Q96GS4	357 aa		6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	PUS7	Q96PZ0	661 aa	Known RBP	6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	IFT57	Q9NWB7	429 aa		6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	DDX19B	Q9UMR2	479 aa		6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	MAGI2	Q86UL8	1455 aa		6.08	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	RPAP1	Q9BWH6	1393 aa	Predicted RBP	6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	USP32	Q8NFA0	1604 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ANKRD18B	A2A2Z9	1011 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ARID3C	A6NKF2	412 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	TMCO5B	A8MYB1	307 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	POLR3G	O15318	223 aa	Predicted RBP	6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	AP5Z1	O43299	807 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	MCM2	P49736	904 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	EIF5	P55010	431 aa	Known RBP	6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	INHBE	P58166	350 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ANAPC15	P60006	121 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	MTA1	Q13330	715 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	PTPN14	Q15678	1187 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ZKSCAN2	Q63HK3	967 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	NUTM1	Q86Y26	1132 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	FMNL3	Q8IVF7	1028 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	MSL3	Q8N5Y2	521 aa	Known RBP	6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	DNAAF4	Q8WXU2	420 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	FAXDC2	Q96IV6	333 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	PAIP2	Q9BPZ3	127 aa	Known RBP	6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	UTP14A	Q9BVJ6	771 aa	Known RBP	6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	TEX13A	Q9BXU3	409 aa	Predicted RBP	6.07	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms