RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 EN1Q05925 392 aaPredicted RBP22.36■■□□□ 1.17
TMED1-205ENST00000589638 SMIM5Q71RC9 77 aa22.36■■□□□ 1.17
TMED1-205ENST00000589638 DDX19BQ9UMR2 479 aa22.36■■□□□ 1.17
TMED1-205ENST00000589638 DZIP3Q86Y13 1208 aaKnown RBP22.35■■□□□ 1.17
TMED1-205ENST00000589638 MYD88Q99836 296 aa22.35■■□□□ 1.17
TMED1-205ENST00000589638 TBC1D2BQ9UPU7 963 aa22.35■■□□□ 1.17
TMED1-205ENST00000589638 RREB1Q92766 1687 aa22.35■■□□□ 1.17
TMED1-205ENST00000589638 PXDNLA1KZ92 1463 aa22.34■■□□□ 1.17
TMED1-205ENST00000589638 EZH2Q15910 746 aaKnown RBP22.34■■□□□ 1.17
TMED1-205ENST00000589638 BEND3Q5T5X7 828 aa22.34■■□□□ 1.17
TMED1-205ENST00000589638 METTL22Q9BUU2 404 aaPredicted RBP22.34■■□□□ 1.17
TMED1-205ENST00000589638 SRCIN1Q9C0H9 1055 aa22.34■■□□□ 1.17
TMED1-205ENST00000589638 COL15A1P39059 1388 aa22.34■■□□□ 1.17
TMED1-205ENST00000589638 RPS6KA4O75676 772 aa22.33■■□□□ 1.17
TMED1-205ENST00000589638 BAG6P46379 1132 aa22.33■■□□□ 1.17
TMED1-205ENST00000589638 ERICH6BQ5W0A0 696 aa22.33■■□□□ 1.17
TMED1-205ENST00000589638 RTCBQ9Y3I0 505 aaKnown RBP22.33■■□□□ 1.17
TMED1-205ENST00000589638 C4BP0C0L5 1744 aa22.33■■□□□ 1.17
TMED1-205ENST00000589638 MAP3K15Q6ZN16 1313 aa22.32■■□□□ 1.16
TMED1-205ENST00000589638 NEXNQ0ZGT2 675 aa22.32■■□□□ 1.16
TMED1-205ENST00000589638 DEFB132Q7Z7B7 95 aa22.32■■□□□ 1.16
TMED1-205ENST00000589638 MYH14Q7Z406 1995 aaKnown RBP22.32■■□□□ 1.16
TMED1-205ENST00000589638 ATP10DQ9P241 1426 aa22.31■■□□□ 1.16
TMED1-205ENST00000589638 A0A087WZG4 1122 aa22.31■■□□□ 1.16
TMED1-205ENST00000589638 PHF14O94880 888 aa22.31■■□□□ 1.16
TMED1-205ENST00000589638 CAMKK2Q96RR4 588 aa22.31■■□□□ 1.16
TMED1-205ENST00000589638 ATP5J2-PTCD1G3V325 749 aa22.3■■□□□ 1.16
TMED1-205ENST00000589638 CWF19L2Q2TBE0 894 aaKnown RBP22.3■■□□□ 1.16
TMED1-205ENST00000589638 AMIGO3Q86WK7 504 aa22.3■■□□□ 1.16
TMED1-205ENST00000589638 TAF1LQ8IZX4 1826 aa22.29■■□□□ 1.16
TMED1-205ENST00000589638 ZBTB7BO15156 539 aaPredicted RBP22.29■■□□□ 1.16
TMED1-205ENST00000589638 IGKV5-2P06315 115 aa22.29■■□□□ 1.16
TMED1-205ENST00000589638 HMGB2P26583 209 aaKnown RBP22.29■■□□□ 1.16
TMED1-205ENST00000589638 HLFQ16534 295 aa22.29■■□□□ 1.16
TMED1-205ENST00000589638 LINS1Q8NG48 757 aa22.29■■□□□ 1.16
TMED1-205ENST00000589638 ALDH1L1O75891 902 aa22.28■■□□□ 1.16
TMED1-205ENST00000589638 MEIS3Q99687 375 aa22.28■■□□□ 1.16
TMED1-205ENST00000589638 CHMP4BQ9H444 224 aaKnown RBP22.28■■□□□ 1.16
TMED1-205ENST00000589638 NEURL1BA8MQ27 555 aa22.27■■□□□ 1.16
TMED1-205ENST00000589638 ERVV-1B6SEH8 477 aa22.27■■□□□ 1.16
TMED1-205ENST00000589638 CAMTA2O94983 1202 aa22.27■■□□□ 1.16
TMED1-205ENST00000589638 ZNF827Q17R98 1081 aa22.27■■□□□ 1.16
TMED1-205ENST00000589638 TRAPPC3LQ5T215 181 aa22.27■■□□□ 1.16
TMED1-205ENST00000589638 GIGYF2Q6Y7W6 1299 aaKnown RBP22.27■■□□□ 1.16
TMED1-205ENST00000589638 C1orf115Q9H7X2 142 aa22.27■■□□□ 1.16
TMED1-205ENST00000589638 PPP4R2Q9NY27 417 aa22.27■■□□□ 1.16
TMED1-205ENST00000589638 ARFGEF2Q9Y6D5 1785 aa22.26■■□□□ 1.15
TMED1-205ENST00000589638 TCIRG1Q13488 830 aa22.26■■□□□ 1.15
TMED1-205ENST00000589638 ARHGEF1Q92888 912 aaKnown RBP22.26■■□□□ 1.15
TMED1-205ENST00000589638 ZBTB40Q9NUA8 1239 aa22.26■■□□□ 1.15
TMED1-205ENST00000589638 RGPD3A6NKT7 1758 aaPredicted RBP22.25■■□□□ 1.15
TMED1-205ENST00000589638 RGPD4Q7Z3J3 1758 aa22.25■■□□□ 1.15
TMED1-205ENST00000589638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.25■■□□□ 1.15
TMED1-205ENST00000589638 HSP90AB3PQ58FF7 597 aa22.25■■□□□ 1.15
TMED1-205ENST00000589638 CCDC125Q86Z20 511 aa22.25■■□□□ 1.15
TMED1-205ENST00000589638 AKT1S1Q96B36 256 aa22.25■■□□□ 1.15
TMED1-205ENST00000589638 SRP68Q9UHB9 627 aaKnown RBP22.25■■□□□ 1.15
TMED1-205ENST00000589638 NUP188Q5SRE5 1749 aa22.25■■□□□ 1.15
TMED1-205ENST00000589638 GPTP24298 496 aa22.24■■□□□ 1.15
TMED1-205ENST00000589638 USPL1Q5W0Q7 1092 aa22.24■■□□□ 1.15
TMED1-205ENST00000589638 ISCA1Q9BUE6 129 aa22.24■■□□□ 1.15
TMED1-205ENST00000589638 USP44Q9H0E7 712 aa22.24■■□□□ 1.15
TMED1-205ENST00000589638 C9orf78Q9NZ63 289 aaPredicted RBP22.24■■□□□ 1.15
TMED1-205ENST00000589638 TFCP2L1Q9NZI6 479 aa22.24■■□□□ 1.15
TMED1-205ENST00000589638 ZPR1O75312 459 aa22.23■■□□□ 1.15
TMED1-205ENST00000589638 RFC4P35249 363 aa22.23■■□□□ 1.15
TMED1-205ENST00000589638 AAMPQ13685 434 aa22.23■■□□□ 1.15
TMED1-205ENST00000589638 B4GALNT3Q6L9W6 998 aa22.23■■□□□ 1.15
TMED1-205ENST00000589638 NARFQ9UHQ1 456 aa22.23■■□□□ 1.15
TMED1-205ENST00000589638 GNAI3P08754 354 aa22.22■■□□□ 1.15
TMED1-205ENST00000589638 ADRA2BP18089 450 aa22.22■■□□□ 1.15
TMED1-205ENST00000589638 SSFA2P28290 1259 aa22.22■■□□□ 1.15
TMED1-205ENST00000589638 GCKRQ14397 625 aa22.22■■□□□ 1.15
TMED1-205ENST00000589638 CWC25Q9NXE8 425 aaPredicted RBP22.22■■□□□ 1.15
TMED1-205ENST00000589638 ZNF652Q9Y2D9 606 aa22.22■■□□□ 1.15
TMED1-205ENST00000589638 N4BP2Q86UW6 1770 aaPredicted RBP22.21■■□□□ 1.15
TMED1-205ENST00000589638 NBPF7P0C2Y1 421 aaPredicted RBP22.21■■□□□ 1.15
TMED1-205ENST00000589638 UBTFL1P0CB47 393 aaPredicted RBP22.21■■□□□ 1.15
TMED1-205ENST00000589638 JARID2Q92833 1246 aaPredicted RBP22.21■■□□□ 1.15
TMED1-205ENST00000589638 CCDC136Q96JN2 1154 aa22.21■■□□□ 1.15
TMED1-205ENST00000589638 ANO8Q9HCE9 1232 aaPredicted RBP22.21■■□□□ 1.15
TMED1-205ENST00000589638 PCDHB15Q9Y5E8 787 aa22.21■■□□□ 1.15
TMED1-205ENST00000589638 GRM8O00222 908 aa22.2■■□□□ 1.14
TMED1-205ENST00000589638 CCDC191Q8NCU4 936 aa22.2■■□□□ 1.14
TMED1-205ENST00000589638 UPF1Q92900 1129 aaKnown RBP eCLIP22.2■■□□□ 1.14
TMED1-205ENST00000589638 STK32BQ9NY57 414 aa22.2■■□□□ 1.14
TMED1-205ENST00000589638 MSH5O43196 834 aa22.19■■□□□ 1.14
TMED1-205ENST00000589638 GNAI2P04899 355 aa22.19■■□□□ 1.14
TMED1-205ENST00000589638 BCL2L12Q9HB09 334 aa22.19■■□□□ 1.14
TMED1-205ENST00000589638 USP42Q9H9J4 1324 aaKnown RBP22.19■■□□□ 1.14
TMED1-205ENST00000589638 NLRP10Q86W26 655 aa22.18■■□□□ 1.14
TMED1-205ENST00000589638 ZNF34Q8IZ26 560 aa22.18■■□□□ 1.14
TMED1-205ENST00000589638 NIP7Q9Y221 180 aaKnown RBP eCLIP22.18■■□□□ 1.14
TMED1-205ENST00000589638 LRRFIP2Q9Y608 721 aaKnown RBP22.18■■□□□ 1.14
TMED1-205ENST00000589638 UBN2Q6ZU65 1347 aa22.17■■□□□ 1.14
TMED1-205ENST00000589638 TRIM28Q13263 835 aaKnown RBP22.17■■□□□ 1.14
TMED1-205ENST00000589638 RTL5Q5HYW3 569 aaPredicted RBP22.17■■□□□ 1.14
TMED1-205ENST00000589638 CLEC4GQ6UXB4 293 aa22.17■■□□□ 1.14
TMED1-205ENST00000589638 BICDL1Q6ZP65 573 aa22.17■■□□□ 1.14
TMED1-205ENST00000589638 UBE3BQ7Z3V4 1068 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms