RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 PRPF40BQ6NWY9 871 aaKnown RBP20.47■□□□□ 0.87
ACTN4-211ENST00000589528 CREBZFQ9NS37 354 aa20.47■□□□□ 0.87
ACTN4-211ENST00000589528 DDNO94850 711 aaPredicted RBP20.46■□□□□ 0.87
ACTN4-211ENST00000589528 DZIP3Q86Y13 1208 aaKnown RBP20.46■□□□□ 0.87
ACTN4-211ENST00000589528 MASTLQ96GX5 879 aa20.46■□□□□ 0.87
ACTN4-211ENST00000589528 BTBD11A6QL63 1104 aa20.45■□□□□ 0.86
ACTN4-211ENST00000589528 CAMTA2O94983 1202 aa20.45■□□□□ 0.86
ACTN4-211ENST00000589528 MKRN1Q9UHC7 482 aaKnown RBP20.45■□□□□ 0.86
ACTN4-211ENST00000589528 IQCA1LA6NCM1 817 aa20.44■□□□□ 0.86
ACTN4-211ENST00000589528 SRGNP10124 158 aa20.44■□□□□ 0.86
ACTN4-211ENST00000589528 NBPF5PQ86XG9 351 aaPredicted RBP20.44■□□□□ 0.86
ACTN4-211ENST00000589528 SCN4AP35499 1836 aa20.43■□□□□ 0.86
ACTN4-211ENST00000589528 COL3A1P02461 1466 aaPredicted RBP20.43■□□□□ 0.86
ACTN4-211ENST00000589528 PER1O15534 1290 aaPredicted RBP20.43■□□□□ 0.86
ACTN4-211ENST00000589528 ZNF652Q9Y2D9 606 aa20.43■□□□□ 0.86
ACTN4-211ENST00000589528 POTEIP0CG38 1075 aa20.42■□□□□ 0.86
ACTN4-211ENST00000589528 POTEJP0CG39 1038 aa20.42■□□□□ 0.86
ACTN4-211ENST00000589528 PIP4K2AP48426 406 aaPredicted RBP20.41■□□□□ 0.86
ACTN4-211ENST00000589528 CCDC93Q567U6 631 aa20.41■□□□□ 0.86
ACTN4-211ENST00000589528 CEMIPQ8WUJ3 1361 aa20.41■□□□□ 0.86
ACTN4-211ENST00000589528 KCNQ3O43525 872 aa20.4■□□□□ 0.86
ACTN4-211ENST00000589528 CLEC4GQ6UXB4 293 aa20.4■□□□□ 0.86
ACTN4-211ENST00000589528 LDHDQ86WU2 507 aa20.4■□□□□ 0.86
ACTN4-211ENST00000589528 RTF1Q92541 710 aaKnown RBP20.4■□□□□ 0.86
ACTN4-211ENST00000589528 CFAP53Q96M91 514 aa20.4■□□□□ 0.86
ACTN4-211ENST00000589528 PRKAR2BP31323 418 aa20.39■□□□□ 0.85
ACTN4-211ENST00000589528 USP16Q9Y5T5 823 aa20.39■□□□□ 0.85
ACTN4-211ENST00000589528 NPC1L1Q9UHC9 1359 aa20.38■□□□□ 0.85
ACTN4-211ENST00000589528 NPR1P16066 1061 aa20.38■□□□□ 0.85
ACTN4-211ENST00000589528 EAPPQ56P03 285 aaPredicted RBP20.38■□□□□ 0.85
ACTN4-211ENST00000589528 SNRPA1P09661 255 aaKnown RBP20.37■□□□□ 0.85
ACTN4-211ENST00000589528 TPTE2Q6XPS3 522 aa20.37■□□□□ 0.85
ACTN4-211ENST00000589528 AIDAQ96BJ3 306 aa20.37■□□□□ 0.85
ACTN4-211ENST00000589528 L3MBTL3Q96JM7 780 aaPredicted RBP20.37■□□□□ 0.85
ACTN4-211ENST00000589528 NUDCQ9Y266 331 aa20.37■□□□□ 0.85
ACTN4-211ENST00000589528 CNTNAP1P78357 1384 aa20.36■□□□□ 0.85
ACTN4-211ENST00000589528 GTF2E1P29083 439 aaPredicted RBP20.36■□□□□ 0.85
ACTN4-211ENST00000589528 FKBP4Q02790 459 aaKnown RBP eCLIP20.36■□□□□ 0.851e-6■■□□□ 12.1
ACTN4-211ENST00000589528 PHACTR3Q96KR7 559 aa20.36■□□□□ 0.85
ACTN4-211ENST00000589528 TAF1DQ9H5J8 278 aaPredicted RBP20.36■□□□□ 0.85
ACTN4-211ENST00000589528 ZNF277Q9NRM2 450 aaPredicted RBP20.36■□□□□ 0.85
ACTN4-211ENST00000589528 NIP7Q9Y221 180 aaKnown RBP eCLIP20.36■□□□□ 0.85
ACTN4-211ENST00000589528 CLEC11AQ9Y240 323 aa20.36■□□□□ 0.85
ACTN4-211ENST00000589528 FAM177BA6PVY3 158 aa20.35■□□□□ 0.85
ACTN4-211ENST00000589528 RTKN2Q8IZC4 609 aa20.35■□□□□ 0.85
ACTN4-211ENST00000589528 HACL1Q9UJ83 578 aa20.35■□□□□ 0.85
ACTN4-211ENST00000589528 PRAMEF22A3QJZ6 481 aa20.34■□□□□ 0.85
ACTN4-211ENST00000589528 TMEM88BA6NKF7 163 aa20.34■□□□□ 0.85
ACTN4-211ENST00000589528 RSPH6AQ9H0K4 717 aa20.34■□□□□ 0.85
ACTN4-211ENST00000589528 PASKQ96RG2 1323 aa20.33■□□□□ 0.85
ACTN4-211ENST00000589528 FOXN1O15353 648 aa20.33■□□□□ 0.85
ACTN4-211ENST00000589528 MCM10Q7L590 875 aa20.33■□□□□ 0.85
ACTN4-211ENST00000589528 C7orf43Q8WVR3 580 aa20.33■□□□□ 0.85
ACTN4-211ENST00000589528 ZNF541Q9H0D2 1346 aa20.32■□□□□ 0.84
ACTN4-211ENST00000589528 U2AF1L5P0DN76 240 aaPredicted RBP20.32■□□□□ 0.84
ACTN4-211ENST00000589528 ALDH1B1P30837 517 aa20.32■□□□□ 0.84
ACTN4-211ENST00000589528 U2AF1Q01081 240 aaKnown RBP eCLIP20.32■□□□□ 0.84
ACTN4-211ENST00000589528 EPHX2P34913 555 aa20.31■□□□□ 0.84
ACTN4-211ENST00000589528 PNMA8AQ86V59 439 aaPredicted RBP20.31■□□□□ 0.84
ACTN4-211ENST00000589528 IARSP41252 1262 aaKnown RBP20.3■□□□□ 0.84
ACTN4-211ENST00000589528 CTCFP49711 727 aaPredicted RBP20.3■□□□□ 0.84
ACTN4-211ENST00000589528 VEGFBP49765 207 aa20.3■□□□□ 0.84
ACTN4-211ENST00000589528 OLFM4Q6UX06 510 aa20.3■□□□□ 0.84
ACTN4-211ENST00000589528 PRDM10Q9NQV6 1147 aa20.3■□□□□ 0.84
ACTN4-211ENST00000589528 RNF123Q5XPI4 1314 aa20.29■□□□□ 0.84
ACTN4-211ENST00000589528 KLRG2A4D1S0 409 aaPredicted RBP20.29■□□□□ 0.84
ACTN4-211ENST00000589528 RGL2O15211 777 aa20.29■□□□□ 0.84
ACTN4-211ENST00000589528 SYNE4Q8N205 404 aa20.29■□□□□ 0.84
ACTN4-211ENST00000589528 JDP2Q8WYK2 163 aa20.29■□□□□ 0.84
ACTN4-211ENST00000589528 LAMB4A4D0S4 1761 aa20.29■□□□□ 0.84
ACTN4-211ENST00000589528 NUP98P52948 1817 aa20.27■□□□□ 0.84
ACTN4-211ENST00000589528 NBPF26B4DH59 902 aa20.27■□□□□ 0.84
ACTN4-211ENST00000589528 ITGBL1O95965 494 aaPredicted RBP20.27■□□□□ 0.84
ACTN4-211ENST00000589528 DCTN1Q14203 1278 aa20.27■□□□□ 0.84
ACTN4-211ENST00000589528 NBPF10Q6P3W6 841 aaKnown RBP20.27■□□□□ 0.84
ACTN4-211ENST00000589528 NBPF15Q8N660 670 aa20.27■□□□□ 0.84
ACTN4-211ENST00000589528 NYXQ9GZU5 481 aa20.27■□□□□ 0.84
ACTN4-211ENST00000589528 FZD9O00144 591 aa20.26■□□□□ 0.83
ACTN4-211ENST00000589528 HLFQ16534 295 aa20.26■□□□□ 0.83
ACTN4-211ENST00000589528 MAP1SQ66K74 1059 aaPredicted RBP20.26■□□□□ 0.83
ACTN4-211ENST00000589528 CNTROBQ8N137 903 aa20.26■□□□□ 0.83
ACTN4-211ENST00000589528 GPC2Q8N158 579 aa20.26■□□□□ 0.83
ACTN4-211ENST00000589528 NGEFQ8N5V2 710 aa20.26■□□□□ 0.83
ACTN4-211ENST00000589528 ABT1Q9ULW3 272 aaKnown RBP20.26■□□□□ 0.83
ACTN4-211ENST00000589528 ADAMTSL1Q8N6G6 1762 aa20.26■□□□□ 0.83
ACTN4-211ENST00000589528 HTATSF1O43719 755 aaKnown RBP20.25■□□□□ 0.83
ACTN4-211ENST00000589528 NEFMP07197 916 aa20.25■□□□□ 0.83
ACTN4-211ENST00000589528 LMOD1P29536 600 aaPredicted RBP20.25■□□□□ 0.83
ACTN4-211ENST00000589528 EIF6P56537 245 aaKnown RBP20.25■□□□□ 0.83
ACTN4-211ENST00000589528 TAF7Q15545 349 aaPredicted RBP20.25■□□□□ 0.83
ACTN4-211ENST00000589528 DEFB115Q30KQ5 88 aa20.25■□□□□ 0.83
ACTN4-211ENST00000589528 RPGRQ92834 1020 aaKnown RBP20.25■□□□□ 0.83
ACTN4-211ENST00000589528 GJA3Q9Y6H8 435 aa20.25■□□□□ 0.83
ACTN4-211ENST00000589528 PSMD1Q99460 953 aa20.24■□□□□ 0.83
ACTN4-211ENST00000589528 LBX1P52954 281 aa20.23■□□□□ 0.83
ACTN4-211ENST00000589528 KIF6Q6ZMV9 814 aa20.23■□□□□ 0.83
ACTN4-211ENST00000589528 NUTM1Q86Y26 1132 aa20.23■□□□□ 0.83
ACTN4-211ENST00000589528 WBP1LQ9NX94 342 aa20.23■□□□□ 0.83
ACTN4-211ENST00000589528 DLG5Q8TDM6 1919 aa20.23■□□□□ 0.83
ACTN4-211ENST00000589528 MAP2K1Q02750 393 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms