RNA–Protein interactions for RNA: ENST00000588957.5

GFAP-215, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-215ENST00000588957 BCL2L13Q9BXK5 485 aa18.23■□□□□ 0.51
GFAP-215ENST00000588957 PHAXQ9H814 394 aaKnown RBP18.23■□□□□ 0.51
GFAP-215ENST00000588957 ANO8Q9HCE9 1232 aaPredicted RBP18.23■□□□□ 0.51
GFAP-215ENST00000588957 NOB1Q9ULX3 412 aaKnown RBP18.23■□□□□ 0.51
GFAP-215ENST00000588957 TBC1D2BQ9UPU7 963 aa18.23■□□□□ 0.51
GFAP-215ENST00000588957 COL5A3P25940 1745 aaPredicted RBP18.23■□□□□ 0.51
GFAP-215ENST00000588957 TAF1LQ8IZX4 1826 aa18.22■□□□□ 0.51
GFAP-215ENST00000588957 BCAR3O75815 825 aa18.22■□□□□ 0.51
GFAP-215ENST00000588957 GIGYF2Q6Y7W6 1299 aaKnown RBP18.22■□□□□ 0.51
GFAP-215ENST00000588957 FRAT1Q92837 279 aaPredicted RBP18.22■□□□□ 0.51
GFAP-215ENST00000588957 RREB1Q92766 1687 aa18.22■□□□□ 0.51
GFAP-215ENST00000588957 PI4KAP2A4QPH2 592 aa18.21■□□□□ 0.51
GFAP-215ENST00000588957 ATF7IPQ6VMQ6 1270 aa18.21■□□□□ 0.51
GFAP-215ENST00000588957 TTLL7Q6ZT98 887 aa18.21■□□□□ 0.51
GFAP-215ENST00000588957 COL23A1Q86Y22 540 aaPredicted RBP18.21■□□□□ 0.51
GFAP-215ENST00000588957 PI4KAP1Q8N8J0 262 aa18.21■□□□□ 0.51
GFAP-215ENST00000588957 PNPLA7Q6ZV29 1317 aa18.21■□□□□ 0.51
GFAP-215ENST00000588957 USP42Q9H9J4 1324 aaKnown RBP18.21■□□□□ 0.51
GFAP-215ENST00000588957 CAMTA2O94983 1202 aa18.2■□□□□ 0.5
GFAP-215ENST00000588957 DNAAF4Q8WXU2 420 aa18.2■□□□□ 0.5
GFAP-215ENST00000588957 CHMP4BQ9H444 224 aaKnown RBP18.2■□□□□ 0.5
GFAP-215ENST00000588957 MYH14Q7Z406 1995 aaKnown RBP18.19■□□□□ 0.5
GFAP-215ENST00000588957 TRIM28Q13263 835 aaKnown RBP18.19■□□□□ 0.5
GFAP-215ENST00000588957 TCIRG1Q13488 830 aa18.19■□□□□ 0.5
GFAP-215ENST00000588957 PARP10Q53GL7 1025 aa18.19■□□□□ 0.5
GFAP-215ENST00000588957 G2E3Q7L622 706 aa18.19■□□□□ 0.5
GFAP-215ENST00000588957 FTSJ3Q8IY81 847 aaKnown RBP18.19■□□□□ 0.5
GFAP-215ENST00000588957 METTL22Q9BUU2 404 aaPredicted RBP18.19■□□□□ 0.5
GFAP-215ENST00000588957 ZBTB3Q9H5J0 574 aa18.19■□□□□ 0.5
GFAP-215ENST00000588957 HDAC5Q9UQL6 1122 aa18.19■□□□□ 0.5
GFAP-215ENST00000588957 MAP3K2Q9Y2U5 619 aa18.19■□□□□ 0.5
GFAP-215ENST00000588957 HSP90B1P14625 803 aaKnown RBP18.18■□□□□ 0.5
GFAP-215ENST00000588957 CCT4P50991 539 aaKnown RBP18.18■□□□□ 0.5
GFAP-215ENST00000588957 PDE3AQ14432 1141 aa18.18■□□□□ 0.5
GFAP-215ENST00000588957 USPL1Q5W0Q7 1092 aa18.18■□□□□ 0.5
GFAP-215ENST00000588957 SETDB2Q96T68 719 aa18.18■□□□□ 0.5
GFAP-215ENST00000588957 R3HDM1Q15032 1099 aaKnown RBP18.17■□□□□ 0.5
GFAP-215ENST00000588957 LINS1Q8NG48 757 aa18.17■□□□□ 0.5
GFAP-215ENST00000588957 NUP188Q5SRE5 1749 aa18.17■□□□□ 0.5
GFAP-215ENST00000588957 ALDH1L1O75891 902 aa18.16■□□□□ 0.5
GFAP-215ENST00000588957 GYS1P13807 737 aa18.16■□□□□ 0.5
GFAP-215ENST00000588957 PPP1R42Q7Z4L9 355 aa18.16■□□□□ 0.5
GFAP-215ENST00000588957 DZIP1LQ8IYY4 767 aaKnown RBP18.16■□□□□ 0.5
GFAP-215ENST00000588957 CCDC191Q8NCU4 936 aa18.16■□□□□ 0.5
GFAP-215ENST00000588957 SLC4A10Q6U841 1118 aa18.15■□□□□ 0.5
GFAP-215ENST00000588957 SRCIN1Q9C0H9 1055 aa18.15■□□□□ 0.5
GFAP-215ENST00000588957 NYXQ9GZU5 481 aa18.15■□□□□ 0.5
GFAP-215ENST00000588957 MTFR1LQ9H019 292 aa18.15■□□□□ 0.5
GFAP-215ENST00000588957 TRIM27P14373 513 aa18.14■□□□□ 0.49
GFAP-215ENST00000588957 POLD1P28340 1107 aa18.14■□□□□ 0.49
GFAP-215ENST00000588957 AMIGO3Q86WK7 504 aa18.14■□□□□ 0.49
GFAP-215ENST00000588957 SRP68Q9UHB9 627 aaKnown RBP18.14■□□□□ 0.49
GFAP-215ENST00000588957 NIP7Q9Y221 180 aaKnown RBP eCLIP18.14■□□□□ 0.49
GFAP-215ENST00000588957 RNF123Q5XPI4 1314 aa18.14■□□□□ 0.49
GFAP-215ENST00000588957 IBTKQ9P2D0 1353 aaPredicted RBP18.14■□□□□ 0.49
GFAP-215ENST00000588957 HLFQ16534 295 aa18.13■□□□□ 0.49
GFAP-215ENST00000588957 TPTE2Q6XPS3 522 aa18.13■□□□□ 0.49
GFAP-215ENST00000588957 ZNF34Q8IZ26 560 aa18.13■□□□□ 0.49
GFAP-215ENST00000588957 MYD88Q99836 296 aa18.13■□□□□ 0.49
GFAP-215ENST00000588957 ISCA1Q9BUE6 129 aa18.13■□□□□ 0.49
GFAP-215ENST00000588957 UBR3Q6ZT12 1888 aa18.13■□□□□ 0.49
GFAP-215ENST00000588957 ADCY9O60503 1353 aa18.13■□□□□ 0.49
GFAP-215ENST00000588957 ATP10DQ9P241 1426 aa18.13■□□□□ 0.49
GFAP-215ENST00000588957 F6X3S4 739 aa18.12■□□□□ 0.49
GFAP-215ENST00000588957 NPHP1O15259 732 aa18.12■□□□□ 0.49
GFAP-215ENST00000588957 GTF2E1P29083 439 aaPredicted RBP18.12■□□□□ 0.49
GFAP-215ENST00000588957 RRP1P56182 461 aaKnown RBP18.12■□□□□ 0.49
GFAP-215ENST00000588957 INTS3Q68E01 1043 aaKnown RBP18.12■□□□□ 0.49
GFAP-215ENST00000588957 CWC25Q9NXE8 425 aaPredicted RBP18.12■□□□□ 0.49
GFAP-215ENST00000588957 PARP3Q9Y6F1 533 aa18.12■□□□□ 0.49
GFAP-215ENST00000588957 TM4SF1P30408 202 aa18.11■□□□□ 0.49
GFAP-215ENST00000588957 FKBP8Q14318 412 aa18.11■□□□□ 0.49
GFAP-215ENST00000588957 BEND3Q5T5X7 828 aa18.11■□□□□ 0.49
GFAP-215ENST00000588957 SMIM5Q71RC9 77 aa18.11■□□□□ 0.49
GFAP-215ENST00000588957 BCL2L12Q9HB09 334 aa18.11■□□□□ 0.49
GFAP-215ENST00000588957 SUPT16HQ9Y5B9 1047 aaKnown RBP18.11■□□□□ 0.49
GFAP-215ENST00000588957 QSER1Q2KHR3 1735 aa18.11■□□□□ 0.49
GFAP-215ENST00000588957 CARMIL3Q8ND23 1372 aa18.1■□□□□ 0.49
GFAP-215ENST00000588957 ABCC4O15439 1325 aa18.1■□□□□ 0.49
GFAP-215ENST00000588957 NFIXQ14938 502 aa18.1■□□□□ 0.49
GFAP-215ENST00000588957 TBC1D9BQ66K14 1250 aa18.1■□□□□ 0.49
GFAP-215ENST00000588957 UTP14AQ9BVJ6 771 aaKnown RBP18.1■□□□□ 0.49
GFAP-215ENST00000588957 C9orf78Q9NZ63 289 aaPredicted RBP18.1■□□□□ 0.49
GFAP-215ENST00000588957 PXDNLA1KZ92 1463 aa18.09■□□□□ 0.49
GFAP-215ENST00000588957 PSDA5PKW4 1024 aaPredicted RBP18.09■□□□□ 0.49
GFAP-215ENST00000588957 NEURL1BA8MQ27 555 aa18.09■□□□□ 0.49
GFAP-215ENST00000588957 BICDL1Q6ZP65 573 aa18.09■□□□□ 0.49
GFAP-215ENST00000588957 NLRP10Q86W26 655 aa18.09■□□□□ 0.49
GFAP-215ENST00000588957 NBPF5PQ86XG9 351 aaPredicted RBP18.09■□□□□ 0.49
GFAP-215ENST00000588957 CLUAP1Q96AJ1 413 aa18.09■□□□□ 0.49
GFAP-215ENST00000588957 SPON1Q9HCB6 807 aa18.09■□□□□ 0.49
GFAP-215ENST00000588957 DDX19BQ9UMR2 479 aa18.09■□□□□ 0.49
GFAP-215ENST00000588957 ATP5J2-PTCD1G3V325 749 aa18.08■□□□□ 0.48
GFAP-215ENST00000588957 GNAI3P08754 354 aa18.08■□□□□ 0.48
GFAP-215ENST00000588957 MMP10P09238 476 aa18.08■□□□□ 0.48
GFAP-215ENST00000588957 GPTP24298 496 aa18.08■□□□□ 0.48
GFAP-215ENST00000588957 AAMPQ13685 434 aa18.08■□□□□ 0.48
GFAP-215ENST00000588957 GCKRQ14397 625 aa18.08■□□□□ 0.48
GFAP-215ENST00000588957 ZBTB38Q8NAP3 1195 aaPredicted RBP18.08■□□□□ 0.48
GFAP-215ENST00000588957 TRMT112Q9UI30 125 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms