RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CFAP53Q96M91 514 aa24.69■■□□□ 1.54
CCDC43-204ENST00000588687 SETDB2Q96T68 719 aa24.69■■□□□ 1.54
CCDC43-204ENST00000588687 KDM3BQ7LBC6 1761 aa24.68■■□□□ 1.54
CCDC43-204ENST00000588687 STYK1Q6J9G0 422 aa24.68■■□□□ 1.54
CCDC43-204ENST00000588687 PRPF40BQ6NWY9 871 aaKnown RBP24.68■■□□□ 1.54
CCDC43-204ENST00000588687 MCM10Q7L590 875 aa24.68■■□□□ 1.54
CCDC43-204ENST00000588687 DLG5Q8TDM6 1919 aa24.67■■□□□ 1.54
CCDC43-204ENST00000588687 ZNF219Q9P2Y4 722 aaPredicted RBP24.67■■□□□ 1.54
CCDC43-204ENST00000588687 NBPF26B4DH59 902 aa24.66■■□□□ 1.54
CCDC43-204ENST00000588687 NBPF10Q6P3W6 841 aaKnown RBP24.66■■□□□ 1.54
CCDC43-204ENST00000588687 NBPF15Q8N660 670 aa24.66■■□□□ 1.54
CCDC43-204ENST00000588687 TAOK3Q9H2K8 898 aa24.66■■□□□ 1.54
CCDC43-204ENST00000588687 ST5P78524 1137 aa24.65■■□□□ 1.54
CCDC43-204ENST00000588687 ERFEQ4G0M1 354 aa24.65■■□□□ 1.54
CCDC43-204ENST00000588687 CLEC4GQ6UXB4 293 aa24.65■■□□□ 1.54
CCDC43-204ENST00000588687 C7orf43Q8WVR3 580 aa24.65■■□□□ 1.54
CCDC43-204ENST00000588687 CNKSR1Q969H4 720 aa24.65■■□□□ 1.54
CCDC43-204ENST00000588687 SNRPA1P09661 255 aaKnown RBP24.64■■□□□ 1.54
CCDC43-204ENST00000588687 U2AF1L5P0DN76 240 aaPredicted RBP24.64■■□□□ 1.54
CCDC43-204ENST00000588687 U2AF1Q01081 240 aaKnown RBP eCLIP24.64■■□□□ 1.54
CCDC43-204ENST00000588687 DCTN1Q14203 1278 aa24.64■■□□□ 1.54
CCDC43-204ENST00000588687 NUDCQ9Y266 331 aa24.64■■□□□ 1.54
CCDC43-204ENST00000588687 KLRG2A4D1S0 409 aaPredicted RBP24.63■■□□□ 1.53
CCDC43-204ENST00000588687 RGL2O15211 777 aa24.63■■□□□ 1.53
CCDC43-204ENST00000588687 MASTLQ96GX5 879 aa24.63■■□□□ 1.53
CCDC43-204ENST00000588687 COL13A1Q5TAT6 717 aaPredicted RBP24.62■■□□□ 1.53
CCDC43-204ENST00000588687 SNED1Q8TER0 1413 aa24.61■■□□□ 1.53
CCDC43-204ENST00000588687 HTATSF1O43719 755 aaKnown RBP24.61■■□□□ 1.53
CCDC43-204ENST00000588687 DPY19L2Q6NUT2 758 aa24.61■■□□□ 1.53
CCDC43-204ENST00000588687 NPM2Q86SE8 214 aaKnown RBP24.61■■□□□ 1.53
CCDC43-204ENST00000588687 NBPF5PQ86XG9 351 aaPredicted RBP24.6■■□□□ 1.53
CCDC43-204ENST00000588687 RTF1Q92541 710 aaKnown RBP24.6■■□□□ 1.53
CCDC43-204ENST00000588687 SCN4AP35499 1836 aa24.6■■□□□ 1.53
CCDC43-204ENST00000588687 POTEIP0CG38 1075 aa24.59■■□□□ 1.53
CCDC43-204ENST00000588687 POTEJP0CG39 1038 aa24.59■■□□□ 1.53
CCDC43-204ENST00000588687 SOGA3Q5TF21 947 aa24.59■■□□□ 1.53
CCDC43-204ENST00000588687 ZNF652Q9Y2D9 606 aa24.59■■□□□ 1.53
CCDC43-204ENST00000588687 ADAMTSL1Q8N6G6 1762 aa24.59■■□□□ 1.53
CCDC43-204ENST00000588687 NPHP1O15259 732 aa24.58■■□□□ 1.53
CCDC43-204ENST00000588687 DDNO94850 711 aaPredicted RBP24.58■■□□□ 1.53
CCDC43-204ENST00000588687 NUP98P52948 1817 aa24.57■■□□□ 1.52
CCDC43-204ENST00000588687 NPR1P16066 1061 aa24.56■■□□□ 1.52
CCDC43-204ENST00000588687 HLFQ16534 295 aa24.56■■□□□ 1.52
CCDC43-204ENST00000588687 L3MBTL3Q96JM7 780 aaPredicted RBP24.56■■□□□ 1.52
CCDC43-204ENST00000588687 NIP7Q9Y221 180 aaKnown RBP eCLIP24.56■■□□□ 1.52
CCDC43-204ENST00000588687 ABCC12Q96J65 1359 aa24.55■■□□□ 1.52
CCDC43-204ENST00000588687 CCDC93Q567U6 631 aa24.55■■□□□ 1.52
CCDC43-204ENST00000588687 TAF7Q15545 349 aaPredicted RBP24.54■■□□□ 1.52
CCDC43-204ENST00000588687 CHADLQ6NUI6 762 aa24.54■■□□□ 1.52
CCDC43-204ENST00000588687 OLFM4Q6UX06 510 aa24.54■■□□□ 1.52
CCDC43-204ENST00000588687 MIS18AQ9NYP9 233 aa24.53■■□□□ 1.52
CCDC43-204ENST00000588687 RIC1Q4ADV7 1423 aa24.52■■□□□ 1.52
CCDC43-204ENST00000588687 HSPA1AP0DMV8 641 aaKnown RBP24.52■■□□□ 1.52
CCDC43-204ENST00000588687 HSPA1BP0DMV9 641 aaKnown RBP24.52■■□□□ 1.52
CCDC43-204ENST00000588687 FKBP4Q02790 459 aaKnown RBP eCLIP24.52■■□□□ 1.52
CCDC43-204ENST00000588687 TPTE2Q6XPS3 522 aa24.52■■□□□ 1.52
CCDC43-204ENST00000588687 PLEKHF1Q96S99 279 aa24.52■■□□□ 1.52
CCDC43-204ENST00000588687 ZNF541Q9H0D2 1346 aa24.52■■□□□ 1.52
CCDC43-204ENST00000588687 COL4A5P29400 1685 aa24.52■■□□□ 1.52
CCDC43-204ENST00000588687 CRY2Q49AN0 593 aa24.51■■□□□ 1.51
CCDC43-204ENST00000588687 ZNF277Q9NRM2 450 aaPredicted RBP24.5■■□□□ 1.51
CCDC43-204ENST00000588687 CREBZFQ9NS37 354 aa24.5■■□□□ 1.51
CCDC43-204ENST00000588687 PASKQ96RG2 1323 aa24.5■■□□□ 1.51
CCDC43-204ENST00000588687 TAF1DQ9H5J8 278 aaPredicted RBP24.49■■□□□ 1.51
CCDC43-204ENST00000588687 IBTKQ9P2D0 1353 aaPredicted RBP24.49■■□□□ 1.51
CCDC43-204ENST00000588687 FAM177BA6PVY3 158 aa24.48■■□□□ 1.51
CCDC43-204ENST00000588687 UBN2Q6ZU65 1347 aa24.47■■□□□ 1.51
CCDC43-204ENST00000588687 IQCA1LA6NCM1 817 aa24.47■■□□□ 1.51
CCDC43-204ENST00000588687 EIF4A1P60842 406 aaKnown RBP24.47■■□□□ 1.51
CCDC43-204ENST00000588687 MAP3K15Q6ZN16 1313 aa24.46■■□□□ 1.51
CCDC43-204ENST00000588687 ERVV-1B6SEH8 477 aa24.46■■□□□ 1.51
CCDC43-204ENST00000588687 LDHDQ86WU2 507 aa24.46■■□□□ 1.51
CCDC43-204ENST00000588687 THUMPD2Q9BTF0 503 aaKnown RBP24.46■■□□□ 1.51
CCDC43-204ENST00000588687 LTBP1Q14766 1721 aa24.46■■□□□ 1.51
CCDC43-204ENST00000588687 TTLL7Q6ZT98 887 aa24.45■■□□□ 1.5
CCDC43-204ENST00000588687 RTKN2Q8IZC4 609 aa24.45■■□□□ 1.5
CCDC43-204ENST00000588687 PNISRQ8TF01 805 aaKnown RBP24.45■■□□□ 1.5
CCDC43-204ENST00000588687 CNTNAP1P78357 1384 aa24.44■■□□□ 1.5
CCDC43-204ENST00000588687 FZD9O00144 591 aa24.44■■□□□ 1.5
CCDC43-204ENST00000588687 NFE2L2Q16236 605 aa24.44■■□□□ 1.5
CCDC43-204ENST00000588687 NUTM1Q86Y26 1132 aa24.44■■□□□ 1.5
CCDC43-204ENST00000588687 ALDH1B1P30837 517 aa24.43■■□□□ 1.5
CCDC43-204ENST00000588687 IARSP41252 1262 aaKnown RBP24.43■■□□□ 1.5
CCDC43-204ENST00000588687 SLC51AQ86UW1 340 aa24.43■■□□□ 1.5
CCDC43-204ENST00000588687 TNS4Q8IZW8 715 aa24.43■■□□□ 1.5
CCDC43-204ENST00000588687 PSMD1Q99460 953 aa24.43■■□□□ 1.5
CCDC43-204ENST00000588687 ITGBL1O95965 494 aaPredicted RBP24.42■■□□□ 1.5
CCDC43-204ENST00000588687 LRP10Q7Z4F1 713 aa24.42■■□□□ 1.5
CCDC43-204ENST00000588687 NYXQ9GZU5 481 aa24.42■■□□□ 1.5
CCDC43-204ENST00000588687 MKRN1Q9UHC7 482 aaKnown RBP24.42■■□□□ 1.5
CCDC43-204ENST00000588687 HOXA10P31260 410 aaPredicted RBP24.41■■□□□ 1.5
CCDC43-204ENST00000588687 SYNE4Q8N205 404 aa24.41■■□□□ 1.5
CCDC43-204ENST00000588687 NGEFQ8N5V2 710 aa24.41■■□□□ 1.5
CCDC43-204ENST00000588687 RNF123Q5XPI4 1314 aa24.4■■□□□ 1.5
CCDC43-204ENST00000588687 ANKRD36CQ5JPF3 1778 aa24.4■■□□□ 1.5
CCDC43-204ENST00000588687 HACL1Q9UJ83 578 aa24.4■■□□□ 1.5
CCDC43-204ENST00000588687 NTSR2O95665 410 aa24.39■■□□□ 1.49
CCDC43-204ENST00000588687 ZNF34Q8IZ26 560 aa24.39■■□□□ 1.49
CCDC43-204ENST00000588687 RRP7AQ9Y3A4 280 aaKnown RBP24.39■■□□□ 1.49
CCDC43-204ENST00000588687 ERBB4Q15303 1308 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms