RNA–Protein interactions for RNA: ENST00000588454.5

CALR-206, Transcript of calreticulin, humanhuman

TSL 3

Gene CALR, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-206ENST00000588454 ZNF330Q9Y3S2 320 aaPredicted RBP14.98□□□□□ -0.01
CALR-206ENST00000588454 SCN4AP35499 1836 aa14.97□□□□□ -0.01
CALR-206ENST00000588454 GNAT3A8MTJ3 354 aa14.97□□□□□ -0.01
CALR-206ENST00000588454 FOXN1O15353 648 aa14.97□□□□□ -0.01
CALR-206ENST00000588454 ST5P78524 1137 aa14.97□□□□□ -0.01
CALR-206ENST00000588454 LDHDQ86WU2 507 aa14.97□□□□□ -0.01
CALR-206ENST00000588454 FMNL2Q96PY5 1086 aa14.97□□□□□ -0.01
CALR-206ENST00000588454 TAF1DQ9H5J8 278 aaPredicted RBP14.97□□□□□ -0.01
CALR-206ENST00000588454 SIPA1L3O60292 1781 aaPredicted RBP14.96□□□□□ -0.01
CALR-206ENST00000588454 PER1O15534 1290 aaPredicted RBP14.96□□□□□ -0.01
CALR-206ENST00000588454 ITGBL1O95965 494 aaPredicted RBP14.96□□□□□ -0.01
CALR-206ENST00000588454 NPM2Q86SE8 214 aaKnown RBP14.96□□□□□ -0.01
CALR-206ENST00000588454 GAS2L2Q8NHY3 880 aa14.96□□□□□ -0.01
CALR-206ENST00000588454 ARFGEF2Q9Y6D5 1785 aa14.96□□□□□ -0.02
CALR-206ENST00000588454 CACNA1SQ13698 1873 aa14.95□□□□□ -0.02
CALR-206ENST00000588454 NPHP1O15259 732 aa14.95□□□□□ -0.02
CALR-206ENST00000588454 VEGFBP49765 207 aa14.95□□□□□ -0.02
CALR-206ENST00000588454 KLRG2A4D1S0 409 aaPredicted RBP14.94□□□□□ -0.02
CALR-206ENST00000588454 TMEM88BA6NKF7 163 aa14.94□□□□□ -0.02
CALR-206ENST00000588454 CTCFP49711 727 aaPredicted RBP14.94□□□□□ -0.02
CALR-206ENST00000588454 CLEC4GQ6UXB4 293 aa14.94□□□□□ -0.02
CALR-206ENST00000588454 DZIP3Q86Y13 1208 aaKnown RBP14.94□□□□□ -0.02
CALR-206ENST00000588454 KCNQ3O43525 872 aa14.93□□□□□ -0.02
CALR-206ENST00000588454 CCDC93Q567U6 631 aa14.93□□□□□ -0.02
CALR-206ENST00000588454 USP16Q9Y5T5 823 aa14.93□□□□□ -0.02
CALR-206ENST00000588454 CEMIPQ8WUJ3 1361 aa14.93□□□□□ -0.02
CALR-206ENST00000588454 BTBD11A6QL63 1104 aa14.92□□□□□ -0.02
CALR-206ENST00000588454 NPR1P16066 1061 aa14.92□□□□□ -0.02
CALR-206ENST00000588454 FKBP4Q02790 459 aaKnown RBP eCLIP14.92□□□□□ -0.02
CALR-206ENST00000588454 CC2D1BQ5T0F9 858 aaKnown RBP14.92□□□□□ -0.02
CALR-206ENST00000588454 NBPF5PQ86XG9 351 aaPredicted RBP14.92□□□□□ -0.02
CALR-206ENST00000588454 AIDAQ96BJ3 306 aa14.92□□□□□ -0.02
CALR-206ENST00000588454 WBP1LQ9NX94 342 aa14.92□□□□□ -0.02
CALR-206ENST00000588454 KIF7Q2M1P5 1343 aa14.92□□□□□ -0.02
CALR-206ENST00000588454 BCORQ6W2J9 1755 aa14.91□□□□□ -0.02
CALR-206ENST00000588454 COL3A1P02461 1466 aaPredicted RBP14.91□□□□□ -0.02
CALR-206ENST00000588454 U2SURPO15042 1029 aaKnown RBP14.91□□□□□ -0.02
CALR-206ENST00000588454 HACL1Q9UJ83 578 aa14.91□□□□□ -0.02
CALR-206ENST00000588454 ZNF541Q9H0D2 1346 aa14.91□□□□□ -0.02
CALR-206ENST00000588454 RGL2O15211 777 aa14.9□□□□□ -0.02
CALR-206ENST00000588454 EAPPQ56P03 285 aaPredicted RBP14.9□□□□□ -0.02
CALR-206ENST00000588454 TPTE2Q6XPS3 522 aa14.9□□□□□ -0.02
CALR-206ENST00000588454 RTKN2Q8IZC4 609 aa14.9□□□□□ -0.02
CALR-206ENST00000588454 ZNF277Q9NRM2 450 aaPredicted RBP14.9□□□□□ -0.02
CALR-206ENST00000588454 ADAMTSL1Q8N6G6 1762 aa14.89□□□□□ -0.03
CALR-206ENST00000588454 RASSF10A6NK89 507 aa14.89□□□□□ -0.03
CALR-206ENST00000588454 FZD9O00144 591 aa14.89□□□□□ -0.03
CALR-206ENST00000588454 EPHX2P34913 555 aa14.89□□□□□ -0.03
CALR-206ENST00000588454 PIP4K2AP48426 406 aaPredicted RBP14.89□□□□□ -0.03
CALR-206ENST00000588454 OLFM4Q6UX06 510 aa14.89□□□□□ -0.03
CALR-206ENST00000588454 PNMA8AQ86V59 439 aaPredicted RBP14.89□□□□□ -0.03
CALR-206ENST00000588454 PHACTR3Q96KR7 559 aa14.89□□□□□ -0.03
CALR-206ENST00000588454 CLEC11AQ9Y240 323 aa14.89□□□□□ -0.03
CALR-206ENST00000588454 ZNF652Q9Y2D9 606 aa14.89□□□□□ -0.03
CALR-206ENST00000588454 PRAMEF22A3QJZ6 481 aa14.88□□□□□ -0.03
CALR-206ENST00000588454 SNRPA1P09661 255 aaKnown RBP14.88□□□□□ -0.03
CALR-206ENST00000588454 LBX1P52954 281 aa14.88□□□□□ -0.03
CALR-206ENST00000588454 DEFB115Q30KQ5 88 aa14.88□□□□□ -0.03
CALR-206ENST00000588454 CNTROBQ8N137 903 aa14.88□□□□□ -0.03
CALR-206ENST00000588454 NPC1L1Q9UHC9 1359 aa14.87□□□□□ -0.03
CALR-206ENST00000588454 ALDH1B1P30837 517 aa14.87□□□□□ -0.03
CALR-206ENST00000588454 SYNE4Q8N205 404 aa14.87□□□□□ -0.03
CALR-206ENST00000588454 NIP7Q9Y221 180 aaKnown RBP eCLIP14.87□□□□□ -0.03
CALR-206ENST00000588454 NBPF26B4DH59 902 aa14.86□□□□□ -0.03
CALR-206ENST00000588454 IARSP41252 1262 aaKnown RBP14.86□□□□□ -0.03
CALR-206ENST00000588454 MAP1SQ66K74 1059 aaPredicted RBP14.86□□□□□ -0.03
CALR-206ENST00000588454 NBPF10Q6P3W6 841 aaKnown RBP14.86□□□□□ -0.03
CALR-206ENST00000588454 GPC2Q8N158 579 aa14.86□□□□□ -0.03
CALR-206ENST00000588454 NBPF15Q8N660 670 aa14.86□□□□□ -0.03
CALR-206ENST00000588454 RSPH6AQ9H0K4 717 aa14.86□□□□□ -0.03
CALR-206ENST00000588454 RNF123Q5XPI4 1314 aa14.86□□□□□ -0.03
CALR-206ENST00000588454 HSPA8P11142 646 aaKnown RBP14.85□□□□□ -0.03
CALR-206ENST00000588454 PRKAR2BP31323 418 aa14.85□□□□□ -0.03
CALR-206ENST00000588454 MAP2K1Q02750 393 aaPredicted RBP14.85□□□□□ -0.03
CALR-206ENST00000588454 PSMD1Q99460 953 aa14.85□□□□□ -0.03
CALR-206ENST00000588454 WDR33Q9C0J8 1336 aaKnown RBP14.85□□□□□ -0.03
CALR-206ENST00000588454 JDP2Q8WYK2 163 aa14.84□□□□□ -0.03
CALR-206ENST00000588454 SNED1Q8TER0 1413 aa14.83□□□□□ -0.03
CALR-206ENST00000588454 FAM177BA6PVY3 158 aa14.83□□□□□ -0.04
CALR-206ENST00000588454 HLFQ16534 295 aa14.83□□□□□ -0.04
CALR-206ENST00000588454 CRY2Q49AN0 593 aa14.83□□□□□ -0.04
CALR-206ENST00000588454 CC2D2BQ6DHV5 1058 aa14.83□□□□□ -0.04
CALR-206ENST00000588454 ABHD8Q96I13 439 aa14.83□□□□□ -0.04
CALR-206ENST00000588454 DDX21Q9NR30 783 aaKnown RBP eCLIP14.83□□□□□ -0.04
CALR-206ENST00000588454 GTF2E1P29083 439 aaPredicted RBP14.82□□□□□ -0.04
CALR-206ENST00000588454 MCM10Q7L590 875 aa14.82□□□□□ -0.04
CALR-206ENST00000588454 RTF1Q92541 710 aaKnown RBP14.82□□□□□ -0.04
CALR-206ENST00000588454 EIF6P56537 245 aaKnown RBP14.81□□□□□ -0.04
CALR-206ENST00000588454 ABT1Q9ULW3 272 aaKnown RBP14.81□□□□□ -0.04
CALR-206ENST00000588454 HTATSF1O43719 755 aaKnown RBP14.8□□□□□ -0.04
CALR-206ENST00000588454 SLC34A2O95436 690 aa14.8□□□□□ -0.04
CALR-206ENST00000588454 HOXA10P31260 410 aaPredicted RBP14.8□□□□□ -0.04
CALR-206ENST00000588454 CNGB1Q14028 1251 aaPredicted RBP14.8□□□□□ -0.04
CALR-206ENST00000588454 GRIPAP1Q4V328 841 aa14.8□□□□□ -0.04
CALR-206ENST00000588454 CFAP53Q96M91 514 aa14.8□□□□□ -0.04
CALR-206ENST00000588454 NYXQ9GZU5 481 aa14.8□□□□□ -0.04
CALR-206ENST00000588454 GJA3Q9Y6H8 435 aa14.8□□□□□ -0.04
CALR-206ENST00000588454 ERVV-1B6SEH8 477 aa14.79□□□□□ -0.04
CALR-206ENST00000588454 COL4A5P29400 1685 aa14.79□□□□□ -0.04
CALR-206ENST00000588454 LMOD1P29536 600 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms