RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 SNRPA1P09661 255 aaKnown RBP22.39■■□□□ 1.17
LINC01842-201ENST00000588275 VEGFAP15692 232 aaPredicted RBP22.38■■□□□ 1.17
LINC01842-201ENST00000588275 FER1L6Q2WGJ9 1857 aa22.37■■□□□ 1.17
LINC01842-201ENST00000588275 NBPF5PQ86XG9 351 aaPredicted RBP22.37■■□□□ 1.17
LINC01842-201ENST00000588275 KLRG1Q96E93 195 aa22.37■■□□□ 1.17
LINC01842-201ENST00000588275 ZNF652Q9Y2D9 606 aa22.37■■□□□ 1.17
LINC01842-201ENST00000588275 ERFEQ4G0M1 354 aa22.36■■□□□ 1.17
LINC01842-201ENST00000588275 CNKSR1Q969H4 720 aa22.36■■□□□ 1.17
LINC01842-201ENST00000588275 SLX4Q8IY92 1834 aa22.36■■□□□ 1.17
LINC01842-201ENST00000588275 DPY19L2Q6NUT2 758 aa22.35■■□□□ 1.17
LINC01842-201ENST00000588275 PRPF40BQ6NWY9 871 aaKnown RBP22.35■■□□□ 1.17
LINC01842-201ENST00000588275 TAOK3Q9H2K8 898 aa22.35■■□□□ 1.17
LINC01842-201ENST00000588275 DICER1Q9UPY3 1922 aaKnown RBP22.35■■□□□ 1.17
LINC01842-201ENST00000588275 FAM177BA6PVY3 158 aa22.34■■□□□ 1.17
LINC01842-201ENST00000588275 NEFMP07197 916 aa22.34■■□□□ 1.17
LINC01842-201ENST00000588275 STYK1Q6J9G0 422 aa22.34■■□□□ 1.17
LINC01842-201ENST00000588275 MASTLQ96GX5 879 aa22.34■■□□□ 1.17
LINC01842-201ENST00000588275 ARFGEF2Q9Y6D5 1785 aa22.33■■□□□ 1.17
LINC01842-201ENST00000588275 HTATSF1O43719 755 aaKnown RBP22.33■■□□□ 1.17
LINC01842-201ENST00000588275 SRGNP10124 158 aa22.33■■□□□ 1.17
LINC01842-201ENST00000588275 MIS18AQ9NYP9 233 aa22.33■■□□□ 1.17
LINC01842-201ENST00000588275 NBPF26B4DH59 902 aa22.32■■□□□ 1.16
LINC01842-201ENST00000588275 TAF7Q15545 349 aaPredicted RBP22.32■■□□□ 1.16
LINC01842-201ENST00000588275 NBPF10Q6P3W6 841 aaKnown RBP22.32■■□□□ 1.16
LINC01842-201ENST00000588275 CLEC4GQ6UXB4 293 aa22.32■■□□□ 1.16
LINC01842-201ENST00000588275 NBPF15Q8N660 670 aa22.32■■□□□ 1.16
LINC01842-201ENST00000588275 NIP7Q9Y221 180 aaKnown RBP eCLIP22.32■■□□□ 1.16
LINC01842-201ENST00000588275 LAMB4A4D0S4 1761 aa22.32■■□□□ 1.16
LINC01842-201ENST00000588275 DLG5Q8TDM6 1919 aa22.31■■□□□ 1.16
LINC01842-201ENST00000588275 SOGA3Q5TF21 947 aa22.3■■□□□ 1.16
LINC01842-201ENST00000588275 LTBP3Q9NS15 1303 aa22.3■■□□□ 1.16
LINC01842-201ENST00000588275 NGEFQ8N5V2 710 aa22.29■■□□□ 1.16
LINC01842-201ENST00000588275 POTECB2RU33 542 aa22.28■■□□□ 1.16
LINC01842-201ENST00000588275 TPTE2Q6XPS3 522 aa22.28■■□□□ 1.16
LINC01842-201ENST00000588275 NPR1P16066 1061 aa22.27■■□□□ 1.16
LINC01842-201ENST00000588275 GTF2E1P29083 439 aaPredicted RBP22.27■■□□□ 1.16
LINC01842-201ENST00000588275 HLFQ16534 295 aa22.27■■□□□ 1.16
LINC01842-201ENST00000588275 CCDC93Q567U6 631 aa22.27■■□□□ 1.16
LINC01842-201ENST00000588275 JMYQ8N9B5 988 aa22.27■■□□□ 1.16
LINC01842-201ENST00000588275 KDM3BQ7LBC6 1761 aa22.27■■□□□ 1.16
LINC01842-201ENST00000588275 DDNO94850 711 aaPredicted RBP22.26■■□□□ 1.15
LINC01842-201ENST00000588275 THUMPD2Q9BTF0 503 aaKnown RBP22.25■■□□□ 1.15
LINC01842-201ENST00000588275 PNISRQ8TF01 805 aaKnown RBP22.24■■□□□ 1.15
LINC01842-201ENST00000588275 RRP7AQ9Y3A4 280 aaKnown RBP22.24■■□□□ 1.15
LINC01842-201ENST00000588275 MAPK8IP3Q9UPT6 1336 aa22.24■■□□□ 1.15
LINC01842-201ENST00000588275 OLFM4Q6UX06 510 aa22.23■■□□□ 1.15
LINC01842-201ENST00000588275 RGL2O15211 777 aa22.22■■□□□ 1.15
LINC01842-201ENST00000588275 MYL6BP14649 208 aa22.22■■□□□ 1.15
LINC01842-201ENST00000588275 NFE2L2Q16236 605 aa22.22■■□□□ 1.15
LINC01842-201ENST00000588275 KIF6Q6ZMV9 814 aa22.22■■□□□ 1.15
LINC01842-201ENST00000588275 C7orf43Q8WVR3 580 aa22.22■■□□□ 1.15
LINC01842-201ENST00000588275 ZNF277Q9NRM2 450 aaPredicted RBP22.22■■□□□ 1.15
LINC01842-201ENST00000588275 POTEIP0CG38 1075 aa22.21■■□□□ 1.15
LINC01842-201ENST00000588275 POTEJP0CG39 1038 aa22.21■■□□□ 1.15
LINC01842-201ENST00000588275 FKBP4Q02790 459 aaKnown RBP eCLIP22.21■■□□□ 1.15
LINC01842-201ENST00000588275 CHADLQ6NUI6 762 aa22.21■■□□□ 1.15
LINC01842-201ENST00000588275 NUTM1Q86Y26 1132 aa22.21■■□□□ 1.15
LINC01842-201ENST00000588275 PLEKHF1Q96S99 279 aa22.21■■□□□ 1.15
LINC01842-201ENST00000588275 NUP98P52948 1817 aa22.21■■□□□ 1.15
LINC01842-201ENST00000588275 KLRG2A4D1S0 409 aaPredicted RBP22.2■■□□□ 1.14
LINC01842-201ENST00000588275 EIF4A1P60842 406 aaKnown RBP22.2■■□□□ 1.14
LINC01842-201ENST00000588275 ABCC12Q96J65 1359 aa22.2■■□□□ 1.14
LINC01842-201ENST00000588275 GPTP24298 496 aa22.19■■□□□ 1.14
LINC01842-201ENST00000588275 ALDH1B1P30837 517 aa22.19■■□□□ 1.14
LINC01842-201ENST00000588275 TTLL7Q6ZT98 887 aa22.19■■□□□ 1.14
LINC01842-201ENST00000588275 NYXQ9GZU5 481 aa22.19■■□□□ 1.14
LINC01842-201ENST00000588275 ZBTB3Q9H5J0 574 aa22.19■■□□□ 1.14
LINC01842-201ENST00000588275 MAP3K15Q6ZN16 1313 aa22.19■■□□□ 1.14
LINC01842-201ENST00000588275 IQCA1LA6NCM1 817 aa22.18■■□□□ 1.14
LINC01842-201ENST00000588275 COL13A1Q5TAT6 717 aaPredicted RBP22.18■■□□□ 1.14
LINC01842-201ENST00000588275 RTKN2Q8IZC4 609 aa22.18■■□□□ 1.14
LINC01842-201ENST00000588275 PNNQ9H307 717 aaKnown RBP22.18■■□□□ 1.14
LINC01842-201ENST00000588275 PCNTO95613 3336 aa22.18■■□□□ 1.14
LINC01842-201ENST00000588275 ZNF541Q9H0D2 1346 aa22.17■■□□□ 1.14
LINC01842-201ENST00000588275 ERVV-1B6SEH8 477 aa22.17■■□□□ 1.14
LINC01842-201ENST00000588275 SCN4AP35499 1836 aa22.16■■□□□ 1.14
LINC01842-201ENST00000588275 HSPA1AP0DMV8 641 aaKnown RBP22.15■■□□□ 1.14
LINC01842-201ENST00000588275 HSPA1BP0DMV9 641 aaKnown RBP22.15■■□□□ 1.14
LINC01842-201ENST00000588275 IARSP41252 1262 aaKnown RBP22.15■■□□□ 1.14
LINC01842-201ENST00000588275 EAPPQ56P03 285 aaPredicted RBP22.15■■□□□ 1.14
LINC01842-201ENST00000588275 SYNE4Q8N205 404 aa22.15■■□□□ 1.14
LINC01842-201ENST00000588275 RPGRQ92834 1020 aaKnown RBP22.15■■□□□ 1.14
LINC01842-201ENST00000588275 TSPYL4Q9UJ04 414 aa22.15■■□□□ 1.14
LINC01842-201ENST00000588275 UBN2Q6ZU65 1347 aa22.14■■□□□ 1.14
LINC01842-201ENST00000588275 L3MBTL3Q96JM7 780 aaPredicted RBP22.14■■□□□ 1.13
LINC01842-201ENST00000588275 TAF1DQ9H5J8 278 aaPredicted RBP22.14■■□□□ 1.13
LINC01842-201ENST00000588275 MKRN1Q9UHC7 482 aaKnown RBP22.14■■□□□ 1.13
LINC01842-201ENST00000588275 LDHDQ86WU2 507 aa22.13■■□□□ 1.13
LINC01842-201ENST00000588275 CREBZFQ9NS37 354 aa22.13■■□□□ 1.13
LINC01842-201ENST00000588275 EIF2S2P20042 333 aaKnown RBP22.12■■□□□ 1.13
LINC01842-201ENST00000588275 CRY2Q49AN0 593 aa22.12■■□□□ 1.13
LINC01842-201ENST00000588275 SUSD4Q5VX71 490 aa22.12■■□□□ 1.13
LINC01842-201ENST00000588275 HACL1Q9UJ83 578 aa22.12■■□□□ 1.13
LINC01842-201ENST00000588275 CLEC11AQ9Y240 323 aa22.12■■□□□ 1.13
LINC01842-201ENST00000588275 RNF123Q5XPI4 1314 aa22.11■■□□□ 1.13
LINC01842-201ENST00000588275 TCERG1O14776 1098 aaKnown RBP22.11■■□□□ 1.13
LINC01842-201ENST00000588275 RIPK4P57078 832 aa22.11■■□□□ 1.13
LINC01842-201ENST00000588275 IBTKQ9P2D0 1353 aaPredicted RBP22.11■■□□□ 1.13
LINC01842-201ENST00000588275 CAPN15O75808 1086 aa22.1■■□□□ 1.13
LINC01842-201ENST00000588275 TNS4Q8IZW8 715 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms