RNA–Protein interactions for RNA: ENST00000588037.1

GFAP-211, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-211ENST00000588037 PRPF40BQ6NWY9 871 aaKnown RBP18.91■□□□□ 0.62
GFAP-211ENST00000588037 NPM2Q86SE8 214 aaKnown RBP18.91■□□□□ 0.62
GFAP-211ENST00000588037 MASTLQ96GX5 879 aa18.91■□□□□ 0.62
GFAP-211ENST00000588037 ZNF219Q9P2Y4 722 aaPredicted RBP18.91■□□□□ 0.62
GFAP-211ENST00000588037 ZNF330Q9Y3S2 320 aaPredicted RBP18.91■□□□□ 0.62
GFAP-211ENST00000588037 CCDC24Q8N4L8 307 aa18.9■□□□□ 0.62
GFAP-211ENST00000588037 L3MBTL3Q96JM7 780 aaPredicted RBP18.9■□□□□ 0.62
GFAP-211ENST00000588037 IQCA1LA6NCM1 817 aa18.89■□□□□ 0.61
GFAP-211ENST00000588037 DDNO94850 711 aaPredicted RBP18.89■□□□□ 0.61
GFAP-211ENST00000588037 A1BGP04217 495 aa18.89■□□□□ 0.61
GFAP-211ENST00000588037 CC2D1BQ5T0F9 858 aaKnown RBP18.89■□□□□ 0.61
GFAP-211ENST00000588037 ADAMTSL1Q8N6G6 1762 aa18.88■□□□□ 0.61
GFAP-211ENST00000588037 NPHP1O15259 732 aa18.88■□□□□ 0.61
GFAP-211ENST00000588037 CLEC4GQ6UXB4 293 aa18.88■□□□□ 0.61
GFAP-211ENST00000588037 PASKQ96RG2 1323 aa18.88■□□□□ 0.61
GFAP-211ENST00000588037 CNTNAP1P78357 1384 aa18.88■□□□□ 0.61
GFAP-211ENST00000588037 POTEIP0CG38 1075 aa18.87■□□□□ 0.61
GFAP-211ENST00000588037 POTEJP0CG39 1038 aa18.87■□□□□ 0.61
GFAP-211ENST00000588037 LDHDQ86WU2 507 aa18.87■□□□□ 0.61
GFAP-211ENST00000588037 DZIP3Q86Y13 1208 aaKnown RBP18.87■□□□□ 0.61
GFAP-211ENST00000588037 C7orf43Q8WVR3 580 aa18.87■□□□□ 0.61
GFAP-211ENST00000588037 MKRN1Q9UHC7 482 aaKnown RBP18.87■□□□□ 0.61
GFAP-211ENST00000588037 U2SURPO15042 1029 aaKnown RBP18.86■□□□□ 0.61
GFAP-211ENST00000588037 RGL2O15211 777 aa18.86■□□□□ 0.61
GFAP-211ENST00000588037 KLRG2A4D1S0 409 aaPredicted RBP18.85■□□□□ 0.61
GFAP-211ENST00000588037 BTBD11A6QL63 1104 aa18.85■□□□□ 0.61
GFAP-211ENST00000588037 CCDC93Q567U6 631 aa18.85■□□□□ 0.61
GFAP-211ENST00000588037 TAF1DQ9H5J8 278 aaPredicted RBP18.85■□□□□ 0.61
GFAP-211ENST00000588037 ZNF652Q9Y2D9 606 aa18.85■□□□□ 0.61
GFAP-211ENST00000588037 LAMB4A4D0S4 1761 aa18.84■□□□□ 0.61
GFAP-211ENST00000588037 NPR1P16066 1061 aa18.84■□□□□ 0.61
GFAP-211ENST00000588037 NBPF5PQ86XG9 351 aaPredicted RBP18.84■□□□□ 0.61
GFAP-211ENST00000588037 KCNQ3O43525 872 aa18.83■□□□□ 0.6
GFAP-211ENST00000588037 PRDM10Q9NQV6 1147 aa18.83■□□□□ 0.6
GFAP-211ENST00000588037 FKBP4Q02790 459 aaKnown RBP eCLIP18.82■□□□□ 0.6
GFAP-211ENST00000588037 USP16Q9Y5T5 823 aa18.82■□□□□ 0.6
GFAP-211ENST00000588037 NUP98P52948 1817 aa18.81■□□□□ 0.6
GFAP-211ENST00000588037 FOXN1O15353 648 aa18.81■□□□□ 0.6
GFAP-211ENST00000588037 SNRPA1P09661 255 aaKnown RBP18.81■□□□□ 0.6
GFAP-211ENST00000588037 PHACTR3Q96KR7 559 aa18.81■□□□□ 0.6
GFAP-211ENST00000588037 RSPH6AQ9H0K4 717 aa18.81■□□□□ 0.6
GFAP-211ENST00000588037 TMEM88BA6NKF7 163 aa18.8■□□□□ 0.6
GFAP-211ENST00000588037 ITGBL1O95965 494 aaPredicted RBP18.8■□□□□ 0.6
GFAP-211ENST00000588037 PRKAR2BP31323 418 aa18.8■□□□□ 0.6
GFAP-211ENST00000588037 RTKN2Q8IZC4 609 aa18.8■□□□□ 0.6
GFAP-211ENST00000588037 ZNF541Q9H0D2 1346 aa18.79■□□□□ 0.6
GFAP-211ENST00000588037 PIP4K2AP48426 406 aaPredicted RBP18.79■□□□□ 0.6
GFAP-211ENST00000588037 TPTE2Q6XPS3 522 aa18.79■□□□□ 0.6
GFAP-211ENST00000588037 HACL1Q9UJ83 578 aa18.79■□□□□ 0.6
GFAP-211ENST00000588037 SNED1Q8TER0 1413 aa18.79■□□□□ 0.6
GFAP-211ENST00000588037 TRPM7Q96QT4 1865 aa18.78■□□□□ 0.6
GFAP-211ENST00000588037 CTCFP49711 727 aaPredicted RBP18.78■□□□□ 0.6
GFAP-211ENST00000588037 ZNF277Q9NRM2 450 aaPredicted RBP18.78■□□□□ 0.6
GFAP-211ENST00000588037 NIP7Q9Y221 180 aaKnown RBP eCLIP18.78■□□□□ 0.6
GFAP-211ENST00000588037 DLG5Q8TDM6 1919 aa18.77■□□□□ 0.6
GFAP-211ENST00000588037 PRAMEF22A3QJZ6 481 aa18.77■□□□□ 0.6
GFAP-211ENST00000588037 FZD9O00144 591 aa18.77■□□□□ 0.6
GFAP-211ENST00000588037 VEGFBP49765 207 aa18.77■□□□□ 0.6
GFAP-211ENST00000588037 PNMA8AQ86V59 439 aaPredicted RBP18.77■□□□□ 0.6
GFAP-211ENST00000588037 AIDAQ96BJ3 306 aa18.77■□□□□ 0.6
GFAP-211ENST00000588037 THSD7BQ9C0I4 1608 aa18.76■□□□□ 0.59
GFAP-211ENST00000588037 NBPF26B4DH59 902 aa18.76■□□□□ 0.59
GFAP-211ENST00000588037 ALDH1B1P30837 517 aa18.76■□□□□ 0.59
GFAP-211ENST00000588037 EPHX2P34913 555 aa18.76■□□□□ 0.59
GFAP-211ENST00000588037 EAPPQ56P03 285 aaPredicted RBP18.76■□□□□ 0.59
GFAP-211ENST00000588037 NBPF10Q6P3W6 841 aaKnown RBP18.76■□□□□ 0.59
GFAP-211ENST00000588037 NBPF15Q8N660 670 aa18.76■□□□□ 0.59
GFAP-211ENST00000588037 RTF1Q92541 710 aaKnown RBP18.76■□□□□ 0.59
GFAP-211ENST00000588037 CFAP53Q96M91 514 aa18.76■□□□□ 0.59
GFAP-211ENST00000588037 WBP1LQ9NX94 342 aa18.76■□□□□ 0.59
GFAP-211ENST00000588037 KDM3BQ7LBC6 1761 aa18.76■□□□□ 0.59
GFAP-211ENST00000588037 RASSF10A6NK89 507 aa18.75■□□□□ 0.59
GFAP-211ENST00000588037 IARSP41252 1262 aaKnown RBP18.75■□□□□ 0.59
GFAP-211ENST00000588037 PSMD1Q99460 953 aa18.75■□□□□ 0.59
GFAP-211ENST00000588037 HTATSF1O43719 755 aaKnown RBP18.74■□□□□ 0.59
GFAP-211ENST00000588037 CRY2Q49AN0 593 aa18.74■□□□□ 0.59
GFAP-211ENST00000588037 OLFM4Q6UX06 510 aa18.74■□□□□ 0.59
GFAP-211ENST00000588037 GPC2Q8N158 579 aa18.74■□□□□ 0.59
GFAP-211ENST00000588037 NUDCQ9Y266 331 aa18.74■□□□□ 0.59
GFAP-211ENST00000588037 RIC1Q4ADV7 1423 aa18.74■□□□□ 0.59
GFAP-211ENST00000588037 RNF123Q5XPI4 1314 aa18.74■□□□□ 0.59
GFAP-211ENST00000588037 MCM10Q7L590 875 aa18.73■□□□□ 0.59
GFAP-211ENST00000588037 LTBP1Q14766 1721 aa18.73■□□□□ 0.59
GFAP-211ENST00000588037 CC2D2BQ6DHV5 1058 aa18.72■□□□□ 0.59
GFAP-211ENST00000588037 CNTROBQ8N137 903 aa18.72■□□□□ 0.59
GFAP-211ENST00000588037 SYNE4Q8N205 404 aa18.72■□□□□ 0.59
GFAP-211ENST00000588037 CLEC11AQ9Y240 323 aa18.72■□□□□ 0.59
GFAP-211ENST00000588037 ABCC12Q96J65 1359 aa18.71■□□□□ 0.59
GFAP-211ENST00000588037 IBTKQ9P2D0 1353 aaPredicted RBP18.71■□□□□ 0.59
GFAP-211ENST00000588037 COL4A5P29400 1685 aa18.71■□□□□ 0.59
GFAP-211ENST00000588037 HLFQ16534 295 aa18.71■□□□□ 0.59
GFAP-211ENST00000588037 NYXQ9GZU5 481 aa18.71■□□□□ 0.59
GFAP-211ENST00000588037 U2AF1L5P0DN76 240 aaPredicted RBP18.7■□□□□ 0.58
GFAP-211ENST00000588037 U2AF1Q01081 240 aaKnown RBP eCLIP18.7■□□□□ 0.58
GFAP-211ENST00000588037 CNGB1Q14028 1251 aaPredicted RBP18.7■□□□□ 0.58
GFAP-211ENST00000588037 DEFB115Q30KQ5 88 aa18.7■□□□□ 0.58
GFAP-211ENST00000588037 GRIPAP1Q4V328 841 aa18.7■□□□□ 0.58
GFAP-211ENST00000588037 MAP1SQ66K74 1059 aaPredicted RBP18.7■□□□□ 0.58
GFAP-211ENST00000588037 JDP2Q8WYK2 163 aa18.7■□□□□ 0.58
GFAP-211ENST00000588037 ERVV-1B6SEH8 477 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms