RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 AVPP01185 164 aa8.66□□□□□ -1.02
TUBD1-208ENST00000588009 MZF1P28698 734 aaPredicted RBP8.66□□□□□ -1.02
TUBD1-208ENST00000588009 XPCQ01831 940 aaPredicted RBP8.66□□□□□ -1.02
TUBD1-208ENST00000588009 ITPKCQ96DU7 683 aa8.66□□□□□ -1.02
TUBD1-208ENST00000588009 IFT43Q96FT9 208 aa8.66□□□□□ -1.02
TUBD1-208ENST00000588009 AGBL1Q96MI9 1066 aa8.66□□□□□ -1.02
TUBD1-208ENST00000588009 ZSCAN10Q96SZ4 725 aaPredicted RBP8.66□□□□□ -1.02
TUBD1-208ENST00000588009 KLF16Q9BXK1 252 aaPredicted RBP8.66□□□□□ -1.02
TUBD1-208ENST00000588009 PHACTR1Q9C0D0 580 aa8.66□□□□□ -1.02
TUBD1-208ENST00000588009 NIF3L1Q9GZT8 377 aa8.66□□□□□ -1.02
TUBD1-208ENST00000588009 PARP2Q9UGN5 583 aa8.66□□□□□ -1.02
TUBD1-208ENST00000588009 TTC24A2A3L6 582 aaPredicted RBP8.65□□□□□ -1.02
TUBD1-208ENST00000588009 ZAP70P43403 619 aa8.65□□□□□ -1.02
TUBD1-208ENST00000588009 USP5P45974 858 aa8.65□□□□□ -1.02
TUBD1-208ENST00000588009 GJD3Q8N144 294 aa8.65□□□□□ -1.02
TUBD1-208ENST00000588009 DUSP9Q99956 384 aaKnown RBP8.65□□□□□ -1.02
TUBD1-208ENST00000588009 NIFKQ9BYG3 293 aaKnown RBP8.65□□□□□ -1.02
TUBD1-208ENST00000588009 KLK14Q9P0G3 267 aa8.65□□□□□ -1.02
TUBD1-208ENST00000588009 WWC3Q9ULE0 1092 aa8.65□□□□□ -1.02
TUBD1-208ENST00000588009 SCAMP3O14828 347 aaKnown RBP8.64□□□□□ -1.03
TUBD1-208ENST00000588009 AXIN1O15169 862 aa8.64□□□□□ -1.03
TUBD1-208ENST00000588009 ZIC2O95409 532 aaPredicted RBP8.64□□□□□ -1.03
TUBD1-208ENST00000588009 RELBQ01201 579 aa8.64□□□□□ -1.03
TUBD1-208ENST00000588009 DNM1Q05193 864 aaKnown RBP8.64□□□□□ -1.03
TUBD1-208ENST00000588009 C1orf53Q5VUE5 145 aa8.64□□□□□ -1.03
TUBD1-208ENST00000588009 TMC4Q7Z404 712 aa8.64□□□□□ -1.03
TUBD1-208ENST00000588009 EDEM1Q92611 657 aa8.64□□□□□ -1.03
TUBD1-208ENST00000588009 FAM161BQ96MY7 647 aa8.64□□□□□ -1.03
TUBD1-208ENST00000588009 ST8SIA5O15466 376 aa8.63□□□□□ -1.03
TUBD1-208ENST00000588009 PDGFAP04085 211 aa8.63□□□□□ -1.03
TUBD1-208ENST00000588009 SMCPP49901 116 aaPredicted RBP8.63□□□□□ -1.03
TUBD1-208ENST00000588009 ZC3H6P61129 1189 aaKnown RBP8.63□□□□□ -1.03
TUBD1-208ENST00000588009 ATP2B2Q01814 1243 aa8.63□□□□□ -1.03
TUBD1-208ENST00000588009 LDLRAD1Q5T700 205 aa8.63□□□□□ -1.03
TUBD1-208ENST00000588009 TMEM214Q6NUQ4 689 aaKnown RBP8.63□□□□□ -1.03
TUBD1-208ENST00000588009 SNIP1Q8TAD8 396 aaKnown RBP8.63□□□□□ -1.03
TUBD1-208ENST00000588009 ZNF395Q9H8N7 513 aaPredicted RBP8.63□□□□□ -1.03
TUBD1-208ENST00000588009 ZFAND3Q9H8U3 227 aa8.63□□□□□ -1.03
TUBD1-208ENST00000588009 RNF19AQ9NV58 838 aa8.63□□□□□ -1.03
TUBD1-208ENST00000588009 ITGAEP38570 1179 aa8.62□□□□□ -1.03
TUBD1-208ENST00000588009 WDR4P57081 412 aaKnown RBP8.62□□□□□ -1.03
TUBD1-208ENST00000588009 DAB2P98082 770 aa8.62□□□□□ -1.03
TUBD1-208ENST00000588009 ENOX2Q16206 610 aaKnown RBP8.62□□□□□ -1.03
TUBD1-208ENST00000588009 RHBDD1Q8TEB9 315 aa8.62□□□□□ -1.03
TUBD1-208ENST00000588009 SETDB2Q96T68 719 aa8.62□□□□□ -1.03
TUBD1-208ENST00000588009 MRS2Q9HD23 443 aa8.62□□□□□ -1.03
TUBD1-208ENST00000588009 PNMA6FA0A0J9YX94 578 aa8.61□□□□□ -1.03
TUBD1-208ENST00000588009 SORBS3O60504 671 aa8.61□□□□□ -1.03
TUBD1-208ENST00000588009 GTF2E1P29083 439 aaPredicted RBP8.61□□□□□ -1.03
TUBD1-208ENST00000588009 TXLNAP40222 546 aa8.61□□□□□ -1.03
TUBD1-208ENST00000588009 HDLBPQ00341 1268 aaKnown RBP8.61□□□□□ -1.03
TUBD1-208ENST00000588009 PSMD2Q13200 908 aa8.61□□□□□ -1.03
TUBD1-208ENST00000588009 TIMP2P16035 220 aa8.6□□□□□ -1.03
TUBD1-208ENST00000588009 PCSK2P16519 638 aa8.6□□□□□ -1.03
TUBD1-208ENST00000588009 ERCC5P28715 1186 aaPredicted RBP8.6□□□□□ -1.03
TUBD1-208ENST00000588009 ALG1LQ6GMV1 187 aa8.6□□□□□ -1.03
TUBD1-208ENST00000588009 TREML1Q86YW5 311 aa8.6□□□□□ -1.03
TUBD1-208ENST00000588009 TMEM87AQ8NBN3 555 aa8.6□□□□□ -1.03
TUBD1-208ENST00000588009 GPR152Q8TDT2 470 aa8.6□□□□□ -1.03
TUBD1-208ENST00000588009 GRIP2Q9C0E4 1043 aa8.6□□□□□ -1.03
TUBD1-208ENST00000588009 POTECB2RU33 542 aa8.59□□□□□ -1.03
TUBD1-208ENST00000588009 J3QL48 77 aa8.59□□□□□ -1.03
TUBD1-208ENST00000588009 GPC1P35052 558 aa8.59□□□□□ -1.03
TUBD1-208ENST00000588009 C9orf131Q5VYM1 1079 aa8.59□□□□□ -1.03
TUBD1-208ENST00000588009 C7orf43Q8WVR3 580 aa8.59□□□□□ -1.03
TUBD1-208ENST00000588009 SREK1Q8WXA9 508 aaKnown RBP8.59□□□□□ -1.03
TUBD1-208ENST00000588009 DRC1Q96MC2 740 aa8.59□□□□□ -1.03
TUBD1-208ENST00000588009 BCS1LQ9Y276 419 aa8.59□□□□□ -1.03
TUBD1-208ENST00000588009 C11orf95C9JLR9 678 aaPredicted RBP8.58□□□□□ -1.04
TUBD1-208ENST00000588009 NAALADL2Q58DX5 795 aa8.58□□□□□ -1.04
TUBD1-208ENST00000588009 GNASQ5JWF2 1037 aa8.58□□□□□ -1.04
TUBD1-208ENST00000588009 NUDT16Q96DE0 195 aaKnown RBP8.58□□□□□ -1.04
TUBD1-208ENST00000588009 CSRNP1Q96S65 589 aa8.58□□□□□ -1.04
TUBD1-208ENST00000588009 GGNBP2Q9H3C7 697 aa8.58□□□□□ -1.04
TUBD1-208ENST00000588009 FAM13BQ9NYF5 915 aa8.58□□□□□ -1.04
TUBD1-208ENST00000588009 VTI1BQ9UEU0 232 aa8.58□□□□□ -1.04
TUBD1-208ENST00000588009 MICAL2O94851 1124 aa8.57□□□□□ -1.04
TUBD1-208ENST00000588009 PLA2G4AP47712 749 aa8.57□□□□□ -1.04
TUBD1-208ENST00000588009 C4orf17Q53FE4 359 aa8.57□□□□□ -1.04
TUBD1-208ENST00000588009 SLC27A3Q5K4L6 730 aa8.57□□□□□ -1.04
TUBD1-208ENST00000588009 RPLP1P05386 114 aaKnown RBP8.56□□□□□ -1.04
TUBD1-208ENST00000588009 NEFLP07196 543 aa8.56□□□□□ -1.04
TUBD1-208ENST00000588009 GNA15P30679 374 aa8.56□□□□□ -1.04
TUBD1-208ENST00000588009 RNF144AP50876 292 aaPredicted RBP8.56□□□□□ -1.04
TUBD1-208ENST00000588009 C8orf34Q49A92 452 aa8.56□□□□□ -1.04
TUBD1-208ENST00000588009 TREML4Q6UXN2 200 aa8.56□□□□□ -1.04
TUBD1-208ENST00000588009 METTL16Q86W50 562 aaKnown RBP8.56□□□□□ -1.04
TUBD1-208ENST00000588009 MEIOBQ8N635 442 aa8.56□□□□□ -1.04
TUBD1-208ENST00000588009 TTC16Q8NEE8 873 aa8.56□□□□□ -1.04
TUBD1-208ENST00000588009 RHPN1Q8TCX5 695 aa8.56□□□□□ -1.04
TUBD1-208ENST00000588009 FBF1Q8TES7 1133 aa8.56□□□□□ -1.04
TUBD1-208ENST00000588009 CFHR5Q9BXR6 569 aa8.56□□□□□ -1.04
TUBD1-208ENST00000588009 TGFBR3LH3BV60 316 aa8.55□□□□□ -1.04
TUBD1-208ENST00000588009 ORC1Q13415 861 aa8.55□□□□□ -1.04
TUBD1-208ENST00000588009 HIF1AQ16665 826 aa8.55□□□□□ -1.04
TUBD1-208ENST00000588009 PIK3R5Q8WYR1 880 aa8.55□□□□□ -1.04
TUBD1-208ENST00000588009 AIDAQ96BJ3 306 aa8.55□□□□□ -1.04
TUBD1-208ENST00000588009 SENP2Q9HC62 589 aa8.55□□□□□ -1.04
TUBD1-208ENST00000588009 METTL5Q9NRN9 209 aaKnown RBP8.55□□□□□ -1.04
TUBD1-208ENST00000588009 ZDHHC3Q9NYG2 299 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms