RNA–Protein interactions for RNA: ENST00000587997.6

GFAP-210, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 609 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-210ENST00000587997 NFKBIEO00221 500 aa20.06■□□□□ 0.8
GFAP-210ENST00000587997 PIP4K2AP48426 406 aaPredicted RBP20.06■□□□□ 0.8
GFAP-210ENST00000587997 HTRA3P83110 453 aa20.06■□□□□ 0.8
GFAP-210ENST00000587997 NEFMP07197 916 aa20.05■□□□□ 0.8
GFAP-210ENST00000587997 SNRPA1P09661 255 aaKnown RBP20.05■□□□□ 0.8
GFAP-210ENST00000587997 PRELPP51888 382 aa20.05■□□□□ 0.8
GFAP-210ENST00000587997 DPY19L2Q6NUT2 758 aa20.05■□□□□ 0.8
GFAP-210ENST00000587997 ZNF652Q9Y2D9 606 aa20.05■□□□□ 0.8
GFAP-210ENST00000587997 USP16Q9Y5T5 823 aa20.05■□□□□ 0.8
GFAP-210ENST00000587997 NBPF5PQ86XG9 351 aaPredicted RBP20.04■□□□□ 0.8
GFAP-210ENST00000587997 CNKSR1Q969H4 720 aa20.04■□□□□ 0.8
GFAP-210ENST00000587997 PRAMEF22A3QJZ6 481 aa20.03■□□□□ 0.8
GFAP-210ENST00000587997 DCTN1Q14203 1278 aa20.03■□□□□ 0.8
GFAP-210ENST00000587997 ERFEQ4G0M1 354 aa20.03■□□□□ 0.8
GFAP-210ENST00000587997 KLRG1Q96E93 195 aa20.03■□□□□ 0.8
GFAP-210ENST00000587997 STYK1Q6J9G0 422 aa20.02■□□□□ 0.8
GFAP-210ENST00000587997 TAOK3Q9H2K8 898 aa20.02■□□□□ 0.8
GFAP-210ENST00000587997 HTATSF1O43719 755 aaKnown RBP20.01■□□□□ 0.79
GFAP-210ENST00000587997 SOGA3Q5TF21 947 aa20.01■□□□□ 0.79
GFAP-210ENST00000587997 MASTLQ96GX5 879 aa20.01■□□□□ 0.79
GFAP-210ENST00000587997 PRPF40BQ6NWY9 871 aaKnown RBP20■□□□□ 0.79
GFAP-210ENST00000587997 CLEC4GQ6UXB4 293 aa20■□□□□ 0.79
GFAP-210ENST00000587997 KDM3BQ7LBC6 1761 aa20■□□□□ 0.79
GFAP-210ENST00000587997 SRGNP10124 158 aa19.99■□□□□ 0.79
GFAP-210ENST00000587997 TAF7Q15545 349 aaPredicted RBP19.99■□□□□ 0.79
GFAP-210ENST00000587997 NUP98P52948 1817 aa19.99■□□□□ 0.79
GFAP-210ENST00000587997 FAM177BA6PVY3 158 aa19.98■□□□□ 0.79
GFAP-210ENST00000587997 NIP7Q9Y221 180 aaKnown RBP eCLIP19.98■□□□□ 0.79
GFAP-210ENST00000587997 LTBP3Q9NS15 1303 aa19.98■□□□□ 0.79
GFAP-210ENST00000587997 GTF2E1P29083 439 aaPredicted RBP19.97■□□□□ 0.79
GFAP-210ENST00000587997 TPTE2Q6XPS3 522 aa19.97■□□□□ 0.79
GFAP-210ENST00000587997 MIS18AQ9NYP9 233 aa19.96■□□□□ 0.79
GFAP-210ENST00000587997 NBPF26B4DH59 902 aa19.95■□□□□ 0.78
GFAP-210ENST00000587997 NPR1P16066 1061 aa19.95■□□□□ 0.78
GFAP-210ENST00000587997 CCDC93Q567U6 631 aa19.95■□□□□ 0.78
GFAP-210ENST00000587997 NBPF10Q6P3W6 841 aaKnown RBP19.95■□□□□ 0.78
GFAP-210ENST00000587997 NBPF15Q8N660 670 aa19.95■□□□□ 0.78
GFAP-210ENST00000587997 JMYQ8N9B5 988 aa19.95■□□□□ 0.78
GFAP-210ENST00000587997 NGEFQ8N5V2 710 aa19.94■□□□□ 0.78
GFAP-210ENST00000587997 PNISRQ8TF01 805 aaKnown RBP19.94■□□□□ 0.78
GFAP-210ENST00000587997 SCN4AP35499 1836 aa19.94■□□□□ 0.78
GFAP-210ENST00000587997 POTECB2RU33 542 aa19.92■□□□□ 0.78
GFAP-210ENST00000587997 RGL2O15211 777 aa19.92■□□□□ 0.78
GFAP-210ENST00000587997 DDNO94850 711 aaPredicted RBP19.92■□□□□ 0.78
GFAP-210ENST00000587997 MAPK8IP3Q9UPT6 1336 aa19.92■□□□□ 0.78
GFAP-210ENST00000587997 HLFQ16534 295 aa19.91■□□□□ 0.78
GFAP-210ENST00000587997 PNNQ9H307 717 aaKnown RBP19.91■□□□□ 0.78
GFAP-210ENST00000587997 CHADLQ6NUI6 762 aa19.9■□□□□ 0.78
GFAP-210ENST00000587997 KIF6Q6ZMV9 814 aa19.9■□□□□ 0.78
GFAP-210ENST00000587997 NYXQ9GZU5 481 aa19.9■□□□□ 0.78
GFAP-210ENST00000587997 RRP7AQ9Y3A4 280 aaKnown RBP19.9■□□□□ 0.78
GFAP-210ENST00000587997 IQCA1LA6NCM1 817 aa19.89■□□□□ 0.77
GFAP-210ENST00000587997 ALDH1B1P30837 517 aa19.89■□□□□ 0.77
GFAP-210ENST00000587997 FKBP4Q02790 459 aaKnown RBP eCLIP19.89■□□□□ 0.77
GFAP-210ENST00000587997 NFE2L2Q16236 605 aa19.89■□□□□ 0.77
GFAP-210ENST00000587997 MYL6BP14649 208 aa19.88■□□□□ 0.77
GFAP-210ENST00000587997 RTKN2Q8IZC4 609 aa19.88■□□□□ 0.77
GFAP-210ENST00000587997 KLRG2A4D1S0 409 aaPredicted RBP19.87■□□□□ 0.77
GFAP-210ENST00000587997 C7orf43Q8WVR3 580 aa19.87■□□□□ 0.77
GFAP-210ENST00000587997 THUMPD2Q9BTF0 503 aaKnown RBP19.87■□□□□ 0.77
GFAP-210ENST00000587997 ZNF277Q9NRM2 450 aaPredicted RBP19.87■□□□□ 0.77
GFAP-210ENST00000587997 MAP3K15Q6ZN16 1313 aa19.86■□□□□ 0.77
GFAP-210ENST00000587997 ERVV-1B6SEH8 477 aa19.86■□□□□ 0.77
GFAP-210ENST00000587997 EIF4A1P60842 406 aaKnown RBP19.86■□□□□ 0.77
GFAP-210ENST00000587997 OLFM4Q6UX06 510 aa19.86■□□□□ 0.77
GFAP-210ENST00000587997 RPGRQ92834 1020 aaKnown RBP19.86■□□□□ 0.77
GFAP-210ENST00000587997 COL13A1Q5TAT6 717 aaPredicted RBP19.85■□□□□ 0.77
GFAP-210ENST00000587997 NUTM1Q86Y26 1132 aa19.85■□□□□ 0.77
GFAP-210ENST00000587997 PLEKHF1Q96S99 279 aa19.85■□□□□ 0.77
GFAP-210ENST00000587997 ZBTB3Q9H5J0 574 aa19.85■□□□□ 0.77
GFAP-210ENST00000587997 POTEIP0CG38 1075 aa19.84■□□□□ 0.77
GFAP-210ENST00000587997 POTEJP0CG39 1038 aa19.84■□□□□ 0.77
GFAP-210ENST00000587997 GPTP24298 496 aa19.84■□□□□ 0.77
GFAP-210ENST00000587997 EAPPQ56P03 285 aaPredicted RBP19.84■□□□□ 0.77
GFAP-210ENST00000587997 TTLL7Q6ZT98 887 aa19.84■□□□□ 0.77
GFAP-210ENST00000587997 ABCC12Q96J65 1359 aa19.83■□□□□ 0.77
GFAP-210ENST00000587997 ZNF541Q9H0D2 1346 aa19.83■□□□□ 0.77
GFAP-210ENST00000587997 HSPA1AP0DMV8 641 aaKnown RBP19.83■□□□□ 0.77
GFAP-210ENST00000587997 HSPA1BP0DMV9 641 aaKnown RBP19.83■□□□□ 0.77
GFAP-210ENST00000587997 IARSP41252 1262 aaKnown RBP19.83■□□□□ 0.77
GFAP-210ENST00000587997 LDHDQ86WU2 507 aa19.83■□□□□ 0.77
GFAP-210ENST00000587997 SYNE4Q8N205 404 aa19.83■□□□□ 0.77
GFAP-210ENST00000587997 L3MBTL3Q96JM7 780 aaPredicted RBP19.83■□□□□ 0.77
GFAP-210ENST00000587997 CREBZFQ9NS37 354 aa19.83■□□□□ 0.77
GFAP-210ENST00000587997 TSPYL4Q9UJ04 414 aa19.83■□□□□ 0.77
GFAP-210ENST00000587997 CLEC11AQ9Y240 323 aa19.83■□□□□ 0.77
GFAP-210ENST00000587997 JDP2Q8WYK2 163 aa19.82■□□□□ 0.76
GFAP-210ENST00000587997 TAF1DQ9H5J8 278 aaPredicted RBP19.82■□□□□ 0.76
GFAP-210ENST00000587997 HACL1Q9UJ83 578 aa19.82■□□□□ 0.76
GFAP-210ENST00000587997 ANKRD36CQ5JPF3 1778 aa19.82■□□□□ 0.76
GFAP-210ENST00000587997 TNS4Q8IZW8 715 aa19.81■□□□□ 0.76
GFAP-210ENST00000587997 MKRN1Q9UHC7 482 aaKnown RBP19.81■□□□□ 0.76
GFAP-210ENST00000587997 PCNTO95613 3336 aa19.81■□□□□ 0.76
GFAP-210ENST00000587997 CRY2Q49AN0 593 aa19.8■□□□□ 0.76
GFAP-210ENST00000587997 CC2D2BQ6DHV5 1058 aa19.8■□□□□ 0.76
GFAP-210ENST00000587997 IBTKQ9P2D0 1353 aaPredicted RBP19.8■□□□□ 0.76
GFAP-210ENST00000587997 ERBB4Q15303 1308 aa19.79■□□□□ 0.76
GFAP-210ENST00000587997 RIC1Q4ADV7 1423 aa19.79■□□□□ 0.76
GFAP-210ENST00000587997 CAPN15O75808 1086 aa19.79■□□□□ 0.76
GFAP-210ENST00000587997 EIF2S2P20042 333 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms