RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 U2AF1L5P0DN76 240 aaPredicted RBP20.24■□□□□ 0.83
HDAC5-206ENST00000587776 PIP4K2AP48426 406 aaPredicted RBP20.24■□□□□ 0.83
HDAC5-206ENST00000587776 U2AF1Q01081 240 aaKnown RBP eCLIP20.24■□□□□ 0.83
HDAC5-206ENST00000587776 JMYQ8N9B5 988 aa20.24■□□□□ 0.83
HDAC5-206ENST00000587776 CNKSR1Q969H4 720 aa20.24■□□□□ 0.83
HDAC5-206ENST00000587776 LAMB4A4D0S4 1761 aa20.23■□□□□ 0.83
HDAC5-206ENST00000587776 TAOK3Q9H2K8 898 aa20.23■□□□□ 0.83
HDAC5-206ENST00000587776 ZNF652Q9Y2D9 606 aa20.23■□□□□ 0.83
HDAC5-206ENST00000587776 DLG5Q8TDM6 1919 aa20.23■□□□□ 0.83
HDAC5-206ENST00000587776 STYK1Q6J9G0 422 aa20.22■□□□□ 0.83
HDAC5-206ENST00000587776 MCM10Q7L590 875 aa20.22■□□□□ 0.83
HDAC5-206ENST00000587776 NBPF5PQ86XG9 351 aaPredicted RBP20.22■□□□□ 0.83
HDAC5-206ENST00000587776 USP16Q9Y5T5 823 aa20.22■□□□□ 0.83
HDAC5-206ENST00000587776 SNRPA1P09661 255 aaKnown RBP20.21■□□□□ 0.83
HDAC5-206ENST00000587776 SOGA3Q5TF21 947 aa20.21■□□□□ 0.83
HDAC5-206ENST00000587776 PRPF40BQ6NWY9 871 aaKnown RBP20.21■□□□□ 0.83
HDAC5-206ENST00000587776 MASTLQ96GX5 879 aa20.21■□□□□ 0.83
HDAC5-206ENST00000587776 PRAMEF22A3QJZ6 481 aa20.2■□□□□ 0.82
HDAC5-206ENST00000587776 LTBP3Q9NS15 1303 aa20.2■□□□□ 0.82
HDAC5-206ENST00000587776 SRGNP10124 158 aa20.19■□□□□ 0.82
HDAC5-206ENST00000587776 PPP2R1AP30153 589 aa20.18■□□□□ 0.82
HDAC5-206ENST00000587776 CLEC4GQ6UXB4 293 aa20.18■□□□□ 0.82
HDAC5-206ENST00000587776 POTECB2RU33 542 aa20.17■□□□□ 0.82
HDAC5-206ENST00000587776 DCTN1Q14203 1278 aa20.17■□□□□ 0.82
HDAC5-206ENST00000587776 SCN4AP35499 1836 aa20.17■□□□□ 0.82
HDAC5-206ENST00000587776 NUP98P52948 1817 aa20.16■□□□□ 0.82
HDAC5-206ENST00000587776 FAM177BA6PVY3 158 aa20.16■□□□□ 0.82
HDAC5-206ENST00000587776 NEFMP07197 916 aa20.16■□□□□ 0.82
HDAC5-206ENST00000587776 COL13A1Q5TAT6 717 aaPredicted RBP20.16■□□□□ 0.82
HDAC5-206ENST00000587776 NIP7Q9Y221 180 aaKnown RBP eCLIP20.16■□□□□ 0.82
HDAC5-206ENST00000587776 KDM3BQ7LBC6 1761 aa20.16■□□□□ 0.82
HDAC5-206ENST00000587776 DDNO94850 711 aaPredicted RBP20.15■□□□□ 0.82
HDAC5-206ENST00000587776 CCDC93Q567U6 631 aa20.15■□□□□ 0.82
HDAC5-206ENST00000587776 HTATSF1O43719 755 aaKnown RBP20.14■□□□□ 0.81
HDAC5-206ENST00000587776 NPR1P16066 1061 aa20.14■□□□□ 0.81
HDAC5-206ENST00000587776 TPTE2Q6XPS3 522 aa20.14■□□□□ 0.81
HDAC5-206ENST00000587776 GTF2E1P29083 439 aaPredicted RBP20.13■□□□□ 0.81
HDAC5-206ENST00000587776 CHADLQ6NUI6 762 aa20.13■□□□□ 0.81
HDAC5-206ENST00000587776 NBPF26B4DH59 902 aa20.12■□□□□ 0.81
HDAC5-206ENST00000587776 TAF7Q15545 349 aaPredicted RBP20.12■□□□□ 0.81
HDAC5-206ENST00000587776 NBPF10Q6P3W6 841 aaKnown RBP20.12■□□□□ 0.81
HDAC5-206ENST00000587776 NBPF15Q8N660 670 aa20.12■□□□□ 0.81
HDAC5-206ENST00000587776 IQCA1LA6NCM1 817 aa20.11■□□□□ 0.81
HDAC5-206ENST00000587776 HSPA1AP0DMV8 641 aaKnown RBP20.11■□□□□ 0.81
HDAC5-206ENST00000587776 HSPA1BP0DMV9 641 aaKnown RBP20.11■□□□□ 0.81
HDAC5-206ENST00000587776 TNS4Q8IZW8 715 aa20.11■□□□□ 0.81
HDAC5-206ENST00000587776 CAPN15O75808 1086 aa20.1■□□□□ 0.81
HDAC5-206ENST00000587776 FKBP4Q02790 459 aaKnown RBP eCLIP20.1■□□□□ 0.81
HDAC5-206ENST00000587776 NGEFQ8N5V2 710 aa20.1■□□□□ 0.81
HDAC5-206ENST00000587776 MIS18AQ9NYP9 233 aa20.1■□□□□ 0.81
HDAC5-206ENST00000587776 RGL2O15211 777 aa20.09■□□□□ 0.81
HDAC5-206ENST00000587776 POTEIP0CG38 1075 aa20.09■□□□□ 0.81
HDAC5-206ENST00000587776 POTEJP0CG39 1038 aa20.09■□□□□ 0.81
HDAC5-206ENST00000587776 ZNF277Q9NRM2 450 aaPredicted RBP20.09■□□□□ 0.81
HDAC5-206ENST00000587776 HLFQ16534 295 aa20.08■□□□□ 0.81
HDAC5-206ENST00000587776 RTKN2Q8IZC4 609 aa20.08■□□□□ 0.81
HDAC5-206ENST00000587776 C7orf43Q8WVR3 580 aa20.08■□□□□ 0.81
HDAC5-206ENST00000587776 CREBZFQ9NS37 354 aa20.08■□□□□ 0.81
HDAC5-206ENST00000587776 ALDH1B1P30837 517 aa20.07■□□□□ 0.8
HDAC5-206ENST00000587776 OLFM4Q6UX06 510 aa20.07■□□□□ 0.8
HDAC5-206ENST00000587776 PNISRQ8TF01 805 aaKnown RBP20.07■□□□□ 0.8
HDAC5-206ENST00000587776 NYXQ9GZU5 481 aa20.07■□□□□ 0.8
HDAC5-206ENST00000587776 MKRN1Q9UHC7 482 aaKnown RBP20.07■□□□□ 0.8
HDAC5-206ENST00000587776 KLRG2A4D1S0 409 aaPredicted RBP20.06■□□□□ 0.8
HDAC5-206ENST00000587776 EAPPQ56P03 285 aaPredicted RBP20.06■□□□□ 0.8
HDAC5-206ENST00000587776 KIF6Q6ZMV9 814 aa20.06■□□□□ 0.8
HDAC5-206ENST00000587776 LDHDQ86WU2 507 aa20.06■□□□□ 0.8
HDAC5-206ENST00000587776 L3MBTL3Q96JM7 780 aaPredicted RBP20.06■□□□□ 0.8
HDAC5-206ENST00000587776 ZNF541Q9H0D2 1346 aa20.05■□□□□ 0.8
HDAC5-206ENST00000587776 TAF1DQ9H5J8 278 aaPredicted RBP20.05■□□□□ 0.8
HDAC5-206ENST00000587776 RRP7AQ9Y3A4 280 aaKnown RBP20.05■□□□□ 0.8
HDAC5-206ENST00000587776 IARSP41252 1262 aaKnown RBP20.04■□□□□ 0.8
HDAC5-206ENST00000587776 NUTM1Q86Y26 1132 aa20.04■□□□□ 0.8
HDAC5-206ENST00000587776 HACL1Q9UJ83 578 aa20.04■□□□□ 0.8
HDAC5-206ENST00000587776 CLEC11AQ9Y240 323 aa20.04■□□□□ 0.8
HDAC5-206ENST00000587776 PCNTO95613 3336 aa20.04■□□□□ 0.8
HDAC5-206ENST00000587776 ABCC12Q96J65 1359 aa20.04■□□□□ 0.8
HDAC5-206ENST00000587776 MAP3K15Q6ZN16 1313 aa20.03■□□□□ 0.8
HDAC5-206ENST00000587776 MAPK8IP3Q9UPT6 1336 aa20.03■□□□□ 0.8
HDAC5-206ENST00000587776 MYL6BP14649 208 aa20.03■□□□□ 0.8
HDAC5-206ENST00000587776 SYNE4Q8N205 404 aa20.03■□□□□ 0.8
HDAC5-206ENST00000587776 RPGRQ92834 1020 aaKnown RBP20.03■□□□□ 0.8
HDAC5-206ENST00000587776 ERVV-1B6SEH8 477 aa20.02■□□□□ 0.8
HDAC5-206ENST00000587776 ZBTB3Q9H5J0 574 aa20.02■□□□□ 0.8
HDAC5-206ENST00000587776 ADAMTSL1Q8N6G6 1762 aa20.01■□□□□ 0.79
HDAC5-206ENST00000587776 GPTP24298 496 aa20.01■□□□□ 0.79
HDAC5-206ENST00000587776 EIF4A1P60842 406 aaKnown RBP20.01■□□□□ 0.79
HDAC5-206ENST00000587776 NFE2L2Q16236 605 aa20.01■□□□□ 0.79
HDAC5-206ENST00000587776 JDP2Q8WYK2 163 aa20.01■□□□□ 0.79
HDAC5-206ENST00000587776 THUMPD2Q9BTF0 503 aaKnown RBP20.01■□□□□ 0.79
HDAC5-206ENST00000587776 PNNQ9H307 717 aaKnown RBP20.01■□□□□ 0.79
HDAC5-206ENST00000587776 RNF123Q5XPI4 1314 aa20.01■□□□□ 0.79
HDAC5-206ENST00000587776 CNTNAP1P78357 1384 aa20■□□□□ 0.79
HDAC5-206ENST00000587776 EPHX2P34913 555 aa20■□□□□ 0.79
HDAC5-206ENST00000587776 TTLL7Q6ZT98 887 aa20■□□□□ 0.79
HDAC5-206ENST00000587776 PASKQ96RG2 1323 aa20■□□□□ 0.79
HDAC5-206ENST00000587776 CRY2Q49AN0 593 aa19.99■□□□□ 0.79
HDAC5-206ENST00000587776 PLEKHF1Q96S99 279 aa19.99■□□□□ 0.79
HDAC5-206ENST00000587776 PSMD1Q99460 953 aa19.99■□□□□ 0.79
HDAC5-206ENST00000587776 ANKRD36CQ5JPF3 1778 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms