RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.32■■□□□ 1.16
DDX39A-206ENST00000587730 PHRF1Q9P1Y6 1649 aaKnown RBP22.32■■□□□ 1.16
DDX39A-206ENST00000587730 NOL8Q76FK4 1167 aaKnown RBP22.31■■□□□ 1.16
DDX39A-206ENST00000587730 MTERF4Q7Z6M4 381 aaKnown RBP22.31■■□□□ 1.16
DDX39A-206ENST00000587730 ECHDC1Q9NTX5 307 aa22.31■■□□□ 1.16
DDX39A-206ENST00000587730 PTMAP06454 111 aaKnown RBP22.31■■□□□ 1.16
DDX39A-206ENST00000587730 TEFQ10587 303 aa22.31■■□□□ 1.16
DDX39A-206ENST00000587730 OS9Q13438 667 aaPredicted RBP22.31■■□□□ 1.16
DDX39A-206ENST00000587730 PLEKHO1Q53GL0 409 aaPredicted RBP22.31■■□□□ 1.16
DDX39A-206ENST00000587730 AK2P54819 239 aa22.3■■□□□ 1.16
DDX39A-206ENST00000587730 LMO7Q8WWI1 1683 aa22.3■■□□□ 1.16
DDX39A-206ENST00000587730 PI4KAP2A4QPH2 592 aa22.29■■□□□ 1.16
DDX39A-206ENST00000587730 PI4KAP1Q8N8J0 262 aa22.29■■□□□ 1.16
DDX39A-206ENST00000587730 EVI5LQ96CN4 794 aa22.29■■□□□ 1.16
DDX39A-206ENST00000587730 CHPF2Q9P2E5 772 aa22.29■■□□□ 1.16
DDX39A-206ENST00000587730 NFAT5O94916 1531 aa22.29■■□□□ 1.16
DDX39A-206ENST00000587730 F13A1P00488 732 aa22.29■■□□□ 1.16
DDX39A-206ENST00000587730 NBPF7P0C2Y1 421 aaPredicted RBP22.29■■□□□ 1.16
DDX39A-206ENST00000587730 KIAA2012Q0VF49 1180 aa22.29■■□□□ 1.16
DDX39A-206ENST00000587730 LTV1Q96GA3 475 aaPredicted RBP22.29■■□□□ 1.16
DDX39A-206ENST00000587730 PHF8Q9UPP1 1060 aa22.29■■□□□ 1.16
DDX39A-206ENST00000587730 CHD2O14647 1828 aaKnown RBP22.28■■□□□ 1.16
DDX39A-206ENST00000587730 ZKSCAN1P17029 563 aaPredicted RBP22.28■■□□□ 1.16
DDX39A-206ENST00000587730 EIF2S2P20042 333 aaKnown RBP22.28■■□□□ 1.16
DDX39A-206ENST00000587730 CYP46A1Q9Y6A2 500 aa22.28■■□□□ 1.16
DDX39A-206ENST00000587730 SYT1P21579 422 aa22.27■■□□□ 1.16
DDX39A-206ENST00000587730 RUFY3Q7L099 469 aa22.27■■□□□ 1.16
DDX39A-206ENST00000587730 IL25Q9H293 177 aa22.27■■□□□ 1.16
DDX39A-206ENST00000587730 ADCY9O60503 1353 aa22.27■■□□□ 1.15
DDX39A-206ENST00000587730 BTBD11A6QL63 1104 aa22.27■■□□□ 1.15
DDX39A-206ENST00000587730 RNF214Q8ND24 703 aa22.27■■□□□ 1.15
DDX39A-206ENST00000587730 CHAMP1Q96JM3 812 aa22.27■■□□□ 1.15
DDX39A-206ENST00000587730 ZSWIM6Q9HCJ5 1215 aa22.27■■□□□ 1.15
DDX39A-206ENST00000587730 HYPKQ9NX55 129 aa22.27■■□□□ 1.15
DDX39A-206ENST00000587730 IFIT2P09913 472 aaKnown RBP22.26■■□□□ 1.15
DDX39A-206ENST00000587730 KCNA6P17658 529 aa22.26■■□□□ 1.15
DDX39A-206ENST00000587730 SASS6Q6UVJ0 657 aa22.26■■□□□ 1.15
DDX39A-206ENST00000587730 CWC27Q6UX04 472 aaKnown RBP22.26■■□□□ 1.15
DDX39A-206ENST00000587730 LTN1O94822 1766 aa22.26■■□□□ 1.15
DDX39A-206ENST00000587730 DYNC1I1O14576 645 aa22.25■■□□□ 1.15
DDX39A-206ENST00000587730 GADD45BO75293 160 aaPredicted RBP22.25■■□□□ 1.15
DDX39A-206ENST00000587730 PSMA5P28066 241 aa22.25■■□□□ 1.15
DDX39A-206ENST00000587730 PDRG1Q9NUG6 133 aa22.25■■□□□ 1.15
DDX39A-206ENST00000587730 C9orf78Q9NZ63 289 aaPredicted RBP22.25■■□□□ 1.15
DDX39A-206ENST00000587730 R3HCC1Q9Y3T6 440 aaKnown RBP22.25■■□□□ 1.15
DDX39A-206ENST00000587730 TPM3P06753 285 aa22.24■■□□□ 1.15
DDX39A-206ENST00000587730 CASTP20810 708 aaKnown RBP22.24■■□□□ 1.15
DDX39A-206ENST00000587730 KSR2Q6VAB6 950 aa22.24■■□□□ 1.15
DDX39A-206ENST00000587730 RASEFQ8IZ41 740 aa22.24■■□□□ 1.15
DDX39A-206ENST00000587730 DDX58O95786 925 aaKnown RBP22.24■■□□□ 1.15
DDX39A-206ENST00000587730 PDCP20941 246 aa22.24■■□□□ 1.15
DDX39A-206ENST00000587730 ANKRD1Q15327 319 aa22.24■■□□□ 1.15
DDX39A-206ENST00000587730 NUTM2GQ5VZR2 741 aa22.24■■□□□ 1.15
DDX39A-206ENST00000587730 ZNF530Q6P9A1 599 aaPredicted RBP22.24■■□□□ 1.15
DDX39A-206ENST00000587730 SNRKQ9NRH2 765 aa22.24■■□□□ 1.15
DDX39A-206ENST00000587730 MAP4K4O95819 1239 aaPredicted RBP22.23■■□□□ 1.15
DDX39A-206ENST00000587730 XPCQ01831 940 aaPredicted RBP22.23■■□□□ 1.15
DDX39A-206ENST00000587730 C1orf141Q5JVX7 400 aa22.23■■□□□ 1.15
DDX39A-206ENST00000587730 RNF20Q5VTR2 975 aa22.22■■□□□ 1.15
DDX39A-206ENST00000587730 NBPF6Q5VWK0 638 aa22.22■■□□□ 1.15
DDX39A-206ENST00000587730 NBPF4Q96M43 638 aa22.22■■□□□ 1.15
DDX39A-206ENST00000587730 ALDH8A1Q9H2A2 487 aaPredicted RBP22.22■■□□□ 1.15
DDX39A-206ENST00000587730 CNPY2Q9Y2B0 182 aa22.22■■□□□ 1.15
DDX39A-206ENST00000587730 HEG1Q9ULI3 1381 aa22.22■■□□□ 1.15
DDX39A-206ENST00000587730 UTYO14607 1347 aa22.22■■□□□ 1.15
DDX39A-206ENST00000587730 CCDC171Q6TFL3 1326 aa22.21■■□□□ 1.15
DDX39A-206ENST00000587730 C14orf37Q86TY3 774 aa22.21■■□□□ 1.15
DDX39A-206ENST00000587730 USHBP1Q8N6Y0 703 aa22.21■■□□□ 1.15
DDX39A-206ENST00000587730 LINS1Q8NG48 757 aa22.21■■□□□ 1.15
DDX39A-206ENST00000587730 JAKMIP1Q96N16 626 aaKnown RBP22.21■■□□□ 1.15
DDX39A-206ENST00000587730 LGR6Q9HBX8 967 aa22.21■■□□□ 1.15
DDX39A-206ENST00000587730 NECTIN1Q15223 517 aa22.2■■□□□ 1.14
DDX39A-206ENST00000587730 GDPD2Q9HCC8 539 aa22.2■■□□□ 1.14
DDX39A-206ENST00000587730 SPG7Q9UQ90 795 aa22.2■■□□□ 1.14
DDX39A-206ENST00000587730 RNMTO43148 476 aaKnown RBP22.2■■□□□ 1.14
DDX39A-206ENST00000587730 MAP3K2Q9Y2U5 619 aa22.2■■□□□ 1.14
DDX39A-206ENST00000587730 GJB2P29033 226 aa22.19■■□□□ 1.14
DDX39A-206ENST00000587730 HMGN5P82970 282 aaKnown RBP22.19■■□□□ 1.14
DDX39A-206ENST00000587730 MTMR6Q9Y217 621 aa22.19■■□□□ 1.14
DDX39A-206ENST00000587730 ELP1O95163 1332 aa22.18■■□□□ 1.14
DDX39A-206ENST00000587730 ZNF335Q9H4Z2 1342 aaPredicted RBP22.18■■□□□ 1.14
DDX39A-206ENST00000587730 UQCRHLA0A096LP55 91 aa22.18■■□□□ 1.14
DDX39A-206ENST00000587730 GIGYF1O75420 1035 aaPredicted RBP22.18■■□□□ 1.14
DDX39A-206ENST00000587730 UQCRHP07919 91 aa22.18■■□□□ 1.14
DDX39A-206ENST00000587730 PIBF1Q8WXW3 757 aa22.18■■□□□ 1.14
DDX39A-206ENST00000587730 PRIMPOLQ96LW4 560 aa22.18■■□□□ 1.14
DDX39A-206ENST00000587730 HMG20BQ9P0W2 317 aa22.18■■□□□ 1.14
DDX39A-206ENST00000587730 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.18■■□□□ 1.14
DDX39A-206ENST00000587730 STRCP1A6NGW2 1772 aa22.18■■□□□ 1.14
DDX39A-206ENST00000587730 LTBP4Q8N2S1 1624 aa22.18■■□□□ 1.14
DDX39A-206ENST00000587730 G3BP1Q13283 466 aaKnown RBP eCLIP22.17■■□□□ 1.14
DDX39A-206ENST00000587730 PRPF40BQ6NWY9 871 aaKnown RBP22.17■■□□□ 1.14
DDX39A-206ENST00000587730 MAP4K1Q92918 833 aa22.17■■□□□ 1.14
DDX39A-206ENST00000587730 GRM8O00222 908 aa22.17■■□□□ 1.14
DDX39A-206ENST00000587730 KDM4AO75164 1064 aa22.17■■□□□ 1.14
DDX39A-206ENST00000587730 AACSQ86V21 672 aa22.17■■□□□ 1.14
DDX39A-206ENST00000587730 RBM33Q96EV2 1170 aaKnown RBP22.17■■□□□ 1.14
DDX39A-206ENST00000587730 FOXD4L6Q3SYB3 417 aaPredicted RBP22.16■■□□□ 1.14
DDX39A-206ENST00000587730 FOXD4L3Q6VB84 417 aaPredicted RBP22.16■■□□□ 1.14
DDX39A-206ENST00000587730 CCDC83Q8IWF9 413 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms