RNA–Protein interactions for RNA: ENST00000587578.1

SOCS3-202, Transcript of suppressor of cytokine signaling 3, humanhuman

TSL 4

Gene SOCS3, Length 361 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-202ENST00000587578 LMOD3Q0VAK6 560 aa24.07■■□□□ 1.44
SOCS3-202ENST00000587578 ZNF219Q9P2Y4 722 aaPredicted RBP24.07■■□□□ 1.44
SOCS3-202ENST00000587578 POTECB2RU33 542 aa24.06■■□□□ 1.44
SOCS3-202ENST00000587578 RIPK4P57078 832 aa24.06■■□□□ 1.44
SOCS3-202ENST00000587578 TBC1D2BQ9UPU7 963 aa24.06■■□□□ 1.44
SOCS3-202ENST00000587578 ZNF330Q9Y3S2 320 aaPredicted RBP24.06■■□□□ 1.44
SOCS3-202ENST00000587578 DICER1Q9UPY3 1922 aaKnown RBP24.06■■□□□ 1.44
SOCS3-202ENST00000587578 PRR5LQ6MZQ0 368 aa24.05■■□□□ 1.44
SOCS3-202ENST00000587578 ZNF790Q6PG37 636 aa24.05■■□□□ 1.44
SOCS3-202ENST00000587578 FAM9BQ8IZU0 186 aa24.05■■□□□ 1.44
SOCS3-202ENST00000587578 A0A087WZG4 1122 aa24.04■■□□□ 1.44
SOCS3-202ENST00000587578 C21orf2O43822 256 aa24.04■■□□□ 1.44
SOCS3-202ENST00000587578 ZNF622Q969S3 477 aaKnown RBP eCLIP24.04■■□□□ 1.44
SOCS3-202ENST00000587578 CACNA1SQ13698 1873 aa24.04■■□□□ 1.44
SOCS3-202ENST00000587578 APAF1O14727 1248 aa24.03■■□□□ 1.44
SOCS3-202ENST00000587578 TEFQ10587 303 aa24.03■■□□□ 1.44
SOCS3-202ENST00000587578 BRIP1Q9BX63 1249 aa24.02■■□□□ 1.44
SOCS3-202ENST00000587578 SLX4Q8IY92 1834 aa24.02■■□□□ 1.44
SOCS3-202ENST00000587578 BCORQ6W2J9 1755 aa24.01■■□□□ 1.43
SOCS3-202ENST00000587578 A1BGP04217 495 aa24.01■■□□□ 1.43
SOCS3-202ENST00000587578 PDE6BP35913 854 aa24.01■■□□□ 1.43
SOCS3-202ENST00000587578 MCM10Q7L590 875 aa24.01■■□□□ 1.43
SOCS3-202ENST00000587578 NGEFQ8N5V2 710 aa24.01■■□□□ 1.43
SOCS3-202ENST00000587578 KCNQ3O43525 872 aa24■■□□□ 1.43
SOCS3-202ENST00000587578 CAMTA2O94983 1202 aa24■■□□□ 1.43
SOCS3-202ENST00000587578 IL6STP40189 918 aaPredicted RBP24■■□□□ 1.43
SOCS3-202ENST00000587578 TRIM35Q9UPQ4 493 aa24■■□□□ 1.43
SOCS3-202ENST00000587578 CAPN15O75808 1086 aa23.99■■□□□ 1.43
SOCS3-202ENST00000587578 CCDC27Q2M243 656 aa23.99■■□□□ 1.43
SOCS3-202ENST00000587578 ERFEQ4G0M1 354 aa23.99■■□□□ 1.43
SOCS3-202ENST00000587578 DCTN1Q14203 1278 aa23.98■■□□□ 1.43
SOCS3-202ENST00000587578 TEX13AQ9BXU3 409 aaPredicted RBP23.98■■□□□ 1.43
SOCS3-202ENST00000587578 RRP7AQ9Y3A4 280 aaKnown RBP23.98■■□□□ 1.43
SOCS3-202ENST00000587578 PIP4K2AP48426 406 aaPredicted RBP23.97■■□□□ 1.43
SOCS3-202ENST00000587578 NEUROD2Q15784 382 aa23.97■■□□□ 1.43
SOCS3-202ENST00000587578 DPY19L2Q6NUT2 758 aa23.97■■□□□ 1.43
SOCS3-202ENST00000587578 TNS4Q8IZW8 715 aa23.97■■□□□ 1.43
SOCS3-202ENST00000587578 CNBD1Q8NA66 436 aa23.97■■□□□ 1.43
SOCS3-202ENST00000587578 FMNL2Q96PY5 1086 aa23.97■■□□□ 1.43
SOCS3-202ENST00000587578 ARFGEF2Q9Y6D5 1785 aa23.97■■□□□ 1.43
SOCS3-202ENST00000587578 POTEIP0CG38 1075 aa23.96■■□□□ 1.43
SOCS3-202ENST00000587578 POTEJP0CG39 1038 aa23.96■■□□□ 1.43
SOCS3-202ENST00000587578 HSPA1AP0DMV8 641 aaKnown RBP23.96■■□□□ 1.43
SOCS3-202ENST00000587578 HSPA1BP0DMV9 641 aaKnown RBP23.96■■□□□ 1.43
SOCS3-202ENST00000587578 TAF7Q15545 349 aaPredicted RBP23.96■■□□□ 1.43
SOCS3-202ENST00000587578 BABAM1Q9NWV8 329 aa23.96■■□□□ 1.43
SOCS3-202ENST00000587578 PDZRN3Q9UPQ7 1066 aa23.96■■□□□ 1.43
SOCS3-202ENST00000587578 LTBP3Q9NS15 1303 aa23.95■■□□□ 1.42
SOCS3-202ENST00000587578 PRPF40BQ6NWY9 871 aaKnown RBP23.95■■□□□ 1.42
SOCS3-202ENST00000587578 SETDB2Q96T68 719 aa23.95■■□□□ 1.42
SOCS3-202ENST00000587578 TAOK3Q9H2K8 898 aa23.95■■□□□ 1.42
SOCS3-202ENST00000587578 PRAMEF22A3QJZ6 481 aa23.94■■□□□ 1.42
SOCS3-202ENST00000587578 BTBD11A6QL63 1104 aa23.93■■□□□ 1.42
SOCS3-202ENST00000587578 DDNO94850 711 aaPredicted RBP23.93■■□□□ 1.42
SOCS3-202ENST00000587578 SRGNP10124 158 aa23.93■■□□□ 1.42
SOCS3-202ENST00000587578 DZIP3Q86Y13 1208 aaKnown RBP23.93■■□□□ 1.42
SOCS3-202ENST00000587578 USP16Q9Y5T5 823 aa23.93■■□□□ 1.42
SOCS3-202ENST00000587578 NPHP1O15259 732 aa23.92■■□□□ 1.42
SOCS3-202ENST00000587578 CALD1Q05682 793 aaKnown RBP23.92■■□□□ 1.42
SOCS3-202ENST00000587578 STYK1Q6J9G0 422 aa23.92■■□□□ 1.42
SOCS3-202ENST00000587578 ST5P78524 1137 aa23.91■■□□□ 1.42
SOCS3-202ENST00000587578 CNKSR1Q969H4 720 aa23.91■■□□□ 1.42
SOCS3-202ENST00000587578 THUMPD2Q9BTF0 503 aaKnown RBP23.91■■□□□ 1.42
SOCS3-202ENST00000587578 KDM3BQ7LBC6 1761 aa23.89■■□□□ 1.42
SOCS3-202ENST00000587578 CHADLQ6NUI6 762 aa23.89■■□□□ 1.41
SOCS3-202ENST00000587578 NPM2Q86SE8 214 aaKnown RBP23.89■■□□□ 1.41
SOCS3-202ENST00000587578 WWC1Q8IX03 1113 aa23.89■■□□□ 1.41
SOCS3-202ENST00000587578 MASTLQ96GX5 879 aa23.89■■□□□ 1.41
SOCS3-202ENST00000587578 C7orf43Q8WVR3 580 aa23.88■■□□□ 1.41
SOCS3-202ENST00000587578 MKRN1Q9UHC7 482 aaKnown RBP23.88■■□□□ 1.41
SOCS3-202ENST00000587578 NBPF5PQ86XG9 351 aaPredicted RBP23.87■■□□□ 1.41
SOCS3-202ENST00000587578 CHL1O00533 1208 aa23.86■■□□□ 1.41
SOCS3-202ENST00000587578 OLFM4Q6UX06 510 aa23.86■■□□□ 1.41
SOCS3-202ENST00000587578 CFAP44Q96MT7 982 aa23.86■■□□□ 1.41
SOCS3-202ENST00000587578 CREBZFQ9NS37 354 aa23.86■■□□□ 1.41
SOCS3-202ENST00000587578 IL16Q14005 1332 aa23.85■■□□□ 1.41
SOCS3-202ENST00000587578 ZNF853P0CG23 659 aa23.85■■□□□ 1.41
SOCS3-202ENST00000587578 SOGA3Q5TF21 947 aa23.85■■□□□ 1.41
SOCS3-202ENST00000587578 WDR63Q8IWG1 891 aa23.85■■□□□ 1.41
SOCS3-202ENST00000587578 SCN4AP35499 1836 aa23.84■■□□□ 1.41
SOCS3-202ENST00000587578 NBPF26B4DH59 902 aa23.84■■□□□ 1.41
SOCS3-202ENST00000587578 NBPF10Q6P3W6 841 aaKnown RBP23.84■■□□□ 1.41
SOCS3-202ENST00000587578 NBPF15Q8N660 670 aa23.84■■□□□ 1.41
SOCS3-202ENST00000587578 IFT57Q9NWB7 429 aa23.84■■□□□ 1.41
SOCS3-202ENST00000587578 SNRPA1P09661 255 aaKnown RBP23.83■■□□□ 1.41
SOCS3-202ENST00000587578 GNAI1P63096 354 aa23.83■■□□□ 1.41
SOCS3-202ENST00000587578 CLEC4GQ6UXB4 293 aa23.83■■□□□ 1.41
SOCS3-202ENST00000587578 TSPYL4Q9UJ04 414 aa23.83■■□□□ 1.41
SOCS3-202ENST00000587578 ZNF541Q9H0D2 1346 aa23.83■■□□□ 1.4
SOCS3-202ENST00000587578 KLRG2A4D1S0 409 aaPredicted RBP23.82■■□□□ 1.4
SOCS3-202ENST00000587578 CCDC93Q567U6 631 aa23.82■■□□□ 1.4
SOCS3-202ENST00000587578 L3MBTL3Q96JM7 780 aaPredicted RBP23.82■■□□□ 1.4
SOCS3-202ENST00000587578 ZNF277Q9NRM2 450 aaPredicted RBP23.82■■□□□ 1.4
SOCS3-202ENST00000587578 ZNF521Q96K83 1311 aa23.82■■□□□ 1.4
SOCS3-202ENST00000587578 FAM177BA6PVY3 158 aa23.81■■□□□ 1.4
SOCS3-202ENST00000587578 NPR1P16066 1061 aa23.81■■□□□ 1.4
SOCS3-202ENST00000587578 EIF4A1P60842 406 aaKnown RBP23.81■■□□□ 1.4
SOCS3-202ENST00000587578 TAF1DQ9H5J8 278 aaPredicted RBP23.81■■□□□ 1.4
SOCS3-202ENST00000587578 MIS18AQ9NYP9 233 aa23.81■■□□□ 1.4
SOCS3-202ENST00000587578 ZNF652Q9Y2D9 606 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms