RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 ITGBL1O95965 494 aaPredicted RBP11.62□□□□□ -0.55
SDF2-204ENST00000587338 SRGNP10124 158 aa11.62□□□□□ -0.55
SDF2-204ENST00000587338 HSPA8P11142 646 aaKnown RBP11.62□□□□□ -0.55
SDF2-204ENST00000587338 MTHFSDQ2M296 383 aaKnown RBP11.62□□□□□ -0.55
SDF2-204ENST00000587338 NPM2Q86SE8 214 aaKnown RBP11.62□□□□□ -0.55
SDF2-204ENST00000587338 SETDB2Q96T68 719 aa11.62□□□□□ -0.55
SDF2-204ENST00000587338 VIRMAQ69YN4 1812 aaKnown RBP11.62□□□□□ -0.55
SDF2-204ENST00000587338 SCN4AP35499 1836 aa11.61□□□□□ -0.55
SDF2-204ENST00000587338 CCDC93Q567U6 631 aa11.61□□□□□ -0.55
SDF2-204ENST00000587338 MASTLQ96GX5 879 aa11.61□□□□□ -0.55
SDF2-204ENST00000587338 HACL1Q9UJ83 578 aa11.61□□□□□ -0.55
SDF2-204ENST00000587338 ABT1Q9ULW3 272 aaKnown RBP11.61□□□□□ -0.55
SDF2-204ENST00000587338 HEG1Q9ULI3 1381 aa11.6□□□□□ -0.55
SDF2-204ENST00000587338 EPHX2P34913 555 aa11.6□□□□□ -0.55
SDF2-204ENST00000587338 MAP2K1Q02750 393 aaPredicted RBP11.6□□□□□ -0.55
SDF2-204ENST00000587338 DEFB115Q30KQ5 88 aa11.6□□□□□ -0.55
SDF2-204ENST00000587338 MAP1SQ66K74 1059 aaPredicted RBP11.6□□□□□ -0.55
SDF2-204ENST00000587338 ZNF496Q96IT1 587 aaPredicted RBP11.6□□□□□ -0.55
SDF2-204ENST00000587338 ZNF277Q9NRM2 450 aaPredicted RBP11.6□□□□□ -0.55
SDF2-204ENST00000587338 RNF123Q5XPI4 1314 aa11.6□□□□□ -0.55
SDF2-204ENST00000587338 RASSF10A6NK89 507 aa11.59□□□□□ -0.55
SDF2-204ENST00000587338 CAMTA2O94983 1202 aa11.59□□□□□ -0.55
SDF2-204ENST00000587338 IL6STP40189 918 aaPredicted RBP11.59□□□□□ -0.55
SDF2-204ENST00000587338 FKBP4Q02790 459 aaKnown RBP eCLIP11.59□□□□□ -0.55
SDF2-204ENST00000587338 TEFQ10587 303 aa11.59□□□□□ -0.55
SDF2-204ENST00000587338 CNTROBQ8N137 903 aa11.59□□□□□ -0.55
SDF2-204ENST00000587338 KNSTRNQ9Y448 316 aa11.59□□□□□ -0.55
SDF2-204ENST00000587338 ARFGEF2Q9Y6D5 1785 aa11.59□□□□□ -0.55
SDF2-204ENST00000587338 WDR33Q9C0J8 1336 aaKnown RBP11.59□□□□□ -0.55
SDF2-204ENST00000587338 CCDC85CA6NKD9 419 aa11.58□□□□□ -0.56
SDF2-204ENST00000587338 A1BGP04217 495 aa11.58□□□□□ -0.56
SDF2-204ENST00000587338 ZNF790Q6PG37 636 aa11.58□□□□□ -0.56
SDF2-204ENST00000587338 OLFM4Q6UX06 510 aa11.58□□□□□ -0.56
SDF2-204ENST00000587338 PAXIP1Q6ZW49 1069 aaPredicted RBP11.58□□□□□ -0.56
SDF2-204ENST00000587338 PNMA8AQ86V59 439 aaPredicted RBP11.58□□□□□ -0.56
SDF2-204ENST00000587338 NBPF5PQ86XG9 351 aaPredicted RBP11.58□□□□□ -0.56
SDF2-204ENST00000587338 DZIP3Q86Y13 1208 aaKnown RBP11.58□□□□□ -0.56
SDF2-204ENST00000587338 C7orf43Q8WVR3 580 aa11.58□□□□□ -0.56
SDF2-204ENST00000587338 TEX13AQ9BXU3 409 aaPredicted RBP11.58□□□□□ -0.56
SDF2-204ENST00000587338 CLSPNQ9HAW4 1339 aa11.58□□□□□ -0.56
SDF2-204ENST00000587338 ADAMTSL1Q8N6G6 1762 aa11.57□□□□□ -0.56
SDF2-204ENST00000587338 NPR1P16066 1061 aa11.57□□□□□ -0.56
SDF2-204ENST00000587338 MLLT1Q03111 559 aaPredicted RBP11.57□□□□□ -0.56
SDF2-204ENST00000587338 GRM1Q13255 1194 aa11.57□□□□□ -0.56
SDF2-204ENST00000587338 HSPA5P11021 654 aaKnown RBP11.56□□□□□ -0.56
SDF2-204ENST00000587338 FMNL2Q96PY5 1086 aa11.56□□□□□ -0.56
SDF2-204ENST00000587338 BEGAINQ9BUH8 593 aa11.56□□□□□ -0.56
SDF2-204ENST00000587338 BCORQ6W2J9 1755 aa11.56□□□□□ -0.56
SDF2-204ENST00000587338 DIAPH1O60610 1272 aaKnown RBP11.55□□□□□ -0.56
SDF2-204ENST00000587338 IARSP41252 1262 aaKnown RBP11.55□□□□□ -0.56
SDF2-204ENST00000587338 PIP4K2AP48426 406 aaPredicted RBP11.55□□□□□ -0.56
SDF2-204ENST00000587338 EIF4G2P78344 907 aaKnown RBP eCLIP11.55□□□□□ -0.56
SDF2-204ENST00000587338 RTKN2Q8IZC4 609 aa11.55□□□□□ -0.56
SDF2-204ENST00000587338 GPC2Q8N158 579 aa11.55□□□□□ -0.56
SDF2-204ENST00000587338 CAPNS2Q96L46 248 aa11.55□□□□□ -0.56
SDF2-204ENST00000587338 DDX21Q9NR30 783 aaKnown RBP eCLIP11.55□□□□□ -0.56
SDF2-204ENST00000587338 FAM177BA6PVY3 158 aa11.54□□□□□ -0.56
SDF2-204ENST00000587338 GNAT3A8MTJ3 354 aa11.54□□□□□ -0.56
SDF2-204ENST00000587338 FZD9O00144 591 aa11.54□□□□□ -0.56
SDF2-204ENST00000587338 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
SDF2-204ENST00000587338 CYP4F22Q6NT55 531 aa11.54□□□□□ -0.56
SDF2-204ENST00000587338 IL17REQ8NFR9 667 aa11.54□□□□□ -0.56
SDF2-204ENST00000587338 CFAP44Q96MT7 982 aa11.54□□□□□ -0.56
SDF2-204ENST00000587338 TIMELESSQ9UNS1 1208 aa11.54□□□□□ -0.56
SDF2-204ENST00000587338 ZNF652Q9Y2D9 606 aa11.54□□□□□ -0.56
SDF2-204ENST00000587338 GJA3Q9Y6H8 435 aa11.54□□□□□ -0.56
SDF2-204ENST00000587338 TNRC18O15417 2968 aaPredicted RBP11.54□□□□□ -0.56
SDF2-204ENST00000587338 LMOD1P29536 600 aaPredicted RBP11.53□□□□□ -0.56
SDF2-204ENST00000587338 ECE1P42892 770 aa11.53□□□□□ -0.56
SDF2-204ENST00000587338 FMR1Q06787 632 aaKnown RBP eCLIP11.53□□□□□ -0.561e-9■■■■■ 61.1
SDF2-204ENST00000587338 SYNE4Q8N205 404 aa11.53□□□□□ -0.56
SDF2-204ENST00000587338 GAS2L2Q8NHY3 880 aa11.53□□□□□ -0.56
SDF2-204ENST00000587338 JDP2Q8WYK2 163 aa11.53□□□□□ -0.56
SDF2-204ENST00000587338 TSKSQ9UJT2 592 aa11.53□□□□□ -0.56
SDF2-204ENST00000587338 NIP7Q9Y221 180 aaKnown RBP eCLIP11.53□□□□□ -0.56
SDF2-204ENST00000587338 THSD7BQ9C0I4 1608 aa11.53□□□□□ -0.56
SDF2-204ENST00000587338 U2SURPO15042 1029 aaKnown RBP11.52□□□□□ -0.57
SDF2-204ENST00000587338 KCNQ3O43525 872 aa11.52□□□□□ -0.57
SDF2-204ENST00000587338 CLEC4GQ6UXB4 293 aa11.52□□□□□ -0.57
SDF2-204ENST00000587338 TPTE2Q6XPS3 522 aa11.52□□□□□ -0.57
SDF2-204ENST00000587338 GPR101Q96P66 508 aaPredicted RBP11.52□□□□□ -0.57
SDF2-204ENST00000587338 SIPA1L3O60292 1781 aaPredicted RBP11.51□□□□□ -0.57
SDF2-204ENST00000587338 PRAMEF22A3QJZ6 481 aa11.51□□□□□ -0.57
SDF2-204ENST00000587338 KLRG2A4D1S0 409 aaPredicted RBP11.51□□□□□ -0.57
SDF2-204ENST00000587338 BTBD11A6QL63 1104 aa11.51□□□□□ -0.57
SDF2-204ENST00000587338 TRAF5O00463 557 aa11.51□□□□□ -0.57
SDF2-204ENST00000587338 RGS19P49795 217 aa11.51□□□□□ -0.57
SDF2-204ENST00000587338 EIF6P56537 245 aaKnown RBP11.51□□□□□ -0.57
SDF2-204ENST00000587338 PCDH10Q9P2E7 1040 aa11.51□□□□□ -0.57
SDF2-204ENST00000587338 USP16Q9Y5T5 823 aa11.51□□□□□ -0.57
SDF2-204ENST00000587338 PDE4DIPQ5VU43 2346 aa11.51□□□□□ -0.57
SDF2-204ENST00000587338 COL4A5P29400 1685 aa11.5□□□□□ -0.57
SDF2-204ENST00000587338 GTF2E1P29083 439 aaPredicted RBP11.5□□□□□ -0.57
SDF2-204ENST00000587338 ALDH1B1P30837 517 aa11.5□□□□□ -0.57
SDF2-204ENST00000587338 EPS15P42566 896 aa11.5□□□□□ -0.57
SDF2-204ENST00000587338 PSMD1Q99460 953 aa11.5□□□□□ -0.57
SDF2-204ENST00000587338 LTBP1Q14766 1721 aa11.49□□□□□ -0.57
SDF2-204ENST00000587338 AOC2O75106 756 aa11.49□□□□□ -0.57
SDF2-204ENST00000587338 SCNN1DP51172 638 aa11.49□□□□□ -0.57
SDF2-204ENST00000587338 CC2D1BQ5T0F9 858 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms