RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 POTEIP0CG38 1075 aa10.42□□□□□ -0.74
VMP1-204ENST00000587259 POTEJP0CG39 1038 aa10.42□□□□□ -0.74
VMP1-204ENST00000587259 LMNB1P20700 586 aa10.42□□□□□ -0.74
VMP1-204ENST00000587259 TTLL6Q8N841 843 aa10.42□□□□□ -0.74
VMP1-204ENST00000587259 SMC1BQ8NDV3 1235 aa10.42□□□□□ -0.74
VMP1-204ENST00000587259 ZNF622Q969S3 477 aaKnown RBP eCLIP10.42□□□□□ -0.74
VMP1-204ENST00000587259 TBC1D2BQ9UPU7 963 aa10.42□□□□□ -0.74
VMP1-204ENST00000587259 VIRMAQ69YN4 1812 aaKnown RBP10.42□□□□□ -0.74
VMP1-204ENST00000587259 NPC1L1Q9UHC9 1359 aa10.41□□□□□ -0.74
VMP1-204ENST00000587259 GLTPD2A6NH11 291 aa10.41□□□□□ -0.74
VMP1-204ENST00000587259 KCNQ3O43525 872 aa10.41□□□□□ -0.74
VMP1-204ENST00000587259 ZNF496Q96IT1 587 aaPredicted RBP10.41□□□□□ -0.74
VMP1-204ENST00000587259 TIAM2Q8IVF5 1701 aa10.41□□□□□ -0.74
VMP1-204ENST00000587259 H0YIN7 160 aa10.4□□□□□ -0.74
VMP1-204ENST00000587259 A1BGP04217 495 aa10.4□□□□□ -0.74
VMP1-204ENST00000587259 HSPA1AP0DMV8 641 aaKnown RBP10.4□□□□□ -0.74
VMP1-204ENST00000587259 HSPA1BP0DMV9 641 aaKnown RBP10.4□□□□□ -0.74
VMP1-204ENST00000587259 VEGFAP15692 232 aaPredicted RBP10.4□□□□□ -0.74
VMP1-204ENST00000587259 EIF5P55010 431 aaKnown RBP10.4□□□□□ -0.74
VMP1-204ENST00000587259 TNS4Q8IZW8 715 aa10.4□□□□□ -0.74
VMP1-204ENST00000587259 IL17REQ8NFR9 667 aa10.4□□□□□ -0.74
VMP1-204ENST00000587259 COL11A2P13942 1736 aaPredicted RBP10.4□□□□□ -0.74
VMP1-204ENST00000587259 CCDC88AQ3V6T2 1871 aa10.4□□□□□ -0.75
VMP1-204ENST00000587259 ANKRD31Q8N7Z5 1873 aa10.4□□□□□ -0.75
VMP1-204ENST00000587259 DLEC1Q9Y238 1755 aa10.39□□□□□ -0.75
VMP1-204ENST00000587259 MYBBP1AQ9BQG0 1328 aaKnown RBP10.39□□□□□ -0.75
VMP1-204ENST00000587259 PRAMEF22A3QJZ6 481 aa10.39□□□□□ -0.75
VMP1-204ENST00000587259 U2SURPO15042 1029 aaKnown RBP10.39□□□□□ -0.75
VMP1-204ENST00000587259 DIAPH1O60610 1272 aaKnown RBP10.39□□□□□ -0.75
VMP1-204ENST00000587259 PRR5LQ6MZQ0 368 aa10.39□□□□□ -0.75
VMP1-204ENST00000587259 UBR2Q8IWV8 1755 aa10.39□□□□□ -0.75
VMP1-204ENST00000587259 DDNO94850 711 aaPredicted RBP10.38□□□□□ -0.75
VMP1-204ENST00000587259 ERFEQ4G0M1 354 aa10.38□□□□□ -0.75
VMP1-204ENST00000587259 OLFM4Q6UX06 510 aa10.38□□□□□ -0.75
VMP1-204ENST00000587259 TTC5Q8N0Z6 440 aa10.38□□□□□ -0.75
VMP1-204ENST00000587259 MKRN1Q9UHC7 482 aaKnown RBP10.38□□□□□ -0.75
VMP1-204ENST00000587259 PER1O15534 1290 aaPredicted RBP10.37□□□□□ -0.75
VMP1-204ENST00000587259 STARD3NLO95772 234 aa10.37□□□□□ -0.75
VMP1-204ENST00000587259 ZNF790Q6PG37 636 aa10.37□□□□□ -0.75
VMP1-204ENST00000587259 VSIG10Q8N0Z9 540 aa10.37□□□□□ -0.75
VMP1-204ENST00000587259 PHACTR3Q96KR7 559 aa10.37□□□□□ -0.75
VMP1-204ENST00000587259 MRS2Q9HD23 443 aa10.37□□□□□ -0.75
VMP1-204ENST00000587259 HEG1Q9ULI3 1381 aa10.37□□□□□ -0.75
VMP1-204ENST00000587259 COL3A1P02461 1466 aaPredicted RBP10.36□□□□□ -0.75
VMP1-204ENST00000587259 CAMTA2O94983 1202 aa10.36□□□□□ -0.75
VMP1-204ENST00000587259 TEFQ10587 303 aa10.36□□□□□ -0.75
VMP1-204ENST00000587259 BRIP1Q9BX63 1249 aa10.36□□□□□ -0.75
VMP1-204ENST00000587259 SCN7AQ01118 1682 aa10.36□□□□□ -0.75
VMP1-204ENST00000587259 CACNA1SQ13698 1873 aa10.36□□□□□ -0.75
VMP1-204ENST00000587259 ZC3H4Q9UPT8 1303 aaKnown RBP10.35□□□□□ -0.75
VMP1-204ENST00000587259 SLX4Q8IY92 1834 aa10.35□□□□□ -0.75
VMP1-204ENST00000587259 FAM177BA6PVY3 158 aa10.35□□□□□ -0.75
VMP1-204ENST00000587259 GNAT3A8MTJ3 354 aa10.35□□□□□ -0.75
VMP1-204ENST00000587259 NPHP1O15259 732 aa10.35□□□□□ -0.75
VMP1-204ENST00000587259 MNX1P50219 401 aaPredicted RBP10.35□□□□□ -0.75
VMP1-204ENST00000587259 PRPF40BQ6NWY9 871 aaKnown RBP10.35□□□□□ -0.75
VMP1-204ENST00000587259 SLC51AQ86UW1 340 aa10.35□□□□□ -0.75
VMP1-204ENST00000587259 CNBD1Q8NA66 436 aa10.35□□□□□ -0.75
VMP1-204ENST00000587259 USP16Q9Y5T5 823 aa10.35□□□□□ -0.75
VMP1-204ENST00000587259 A0A087WZG4 1122 aa10.34□□□□□ -0.75
VMP1-204ENST00000587259 PDE6BP35913 854 aa10.34□□□□□ -0.75
VMP1-204ENST00000587259 DPY19L2Q6NUT2 758 aa10.34□□□□□ -0.75
VMP1-204ENST00000587259 DZIP3Q86Y13 1208 aaKnown RBP10.34□□□□□ -0.75
VMP1-204ENST00000587259 SETDB2Q96T68 719 aa10.34□□□□□ -0.75
VMP1-204ENST00000587259 TAOK3Q9H2K8 898 aa10.34□□□□□ -0.75
VMP1-204ENST00000587259 FER1L6Q2WGJ9 1857 aa10.34□□□□□ -0.75
VMP1-204ENST00000587259 BTBD11A6QL63 1104 aa10.33□□□□□ -0.76
VMP1-204ENST00000587259 SRGNP10124 158 aa10.33□□□□□ -0.76
VMP1-204ENST00000587259 PRKAR2BP31323 418 aa10.33□□□□□ -0.76
VMP1-204ENST00000587259 IL6STP40189 918 aaPredicted RBP10.33□□□□□ -0.76
VMP1-204ENST00000587259 DCTN1Q14203 1278 aa10.33□□□□□ -0.76
VMP1-204ENST00000587259 MCM10Q7L590 875 aa10.33□□□□□ -0.76
VMP1-204ENST00000587259 FMNL2Q96PY5 1086 aa10.33□□□□□ -0.76
VMP1-204ENST00000587259 ZNF277Q9NRM2 450 aaPredicted RBP10.33□□□□□ -0.76
VMP1-204ENST00000587259 SIPA1L3O60292 1781 aaPredicted RBP10.33□□□□□ -0.76
VMP1-204ENST00000587259 ZNF541Q9H0D2 1346 aa10.33□□□□□ -0.76
VMP1-204ENST00000587259 FOXN1O15353 648 aa10.32□□□□□ -0.76
VMP1-204ENST00000587259 CEMIPQ8WUJ3 1361 aa10.31□□□□□ -0.76
VMP1-204ENST00000587259 ST5P78524 1137 aa10.31□□□□□ -0.76
VMP1-204ENST00000587259 EAPPQ56P03 285 aaPredicted RBP10.31□□□□□ -0.76
VMP1-204ENST00000587259 STYK1Q6J9G0 422 aa10.31□□□□□ -0.76
VMP1-204ENST00000587259 NBPF5PQ86XG9 351 aaPredicted RBP10.31□□□□□ -0.76
VMP1-204ENST00000587259 GAS2L2Q8NHY3 880 aa10.31□□□□□ -0.76
VMP1-204ENST00000587259 C7orf43Q8WVR3 580 aa10.31□□□□□ -0.76
VMP1-204ENST00000587259 RSPH6AQ9H0K4 717 aa10.31□□□□□ -0.76
VMP1-204ENST00000587259 MIS18AQ9NYP9 233 aa10.31□□□□□ -0.76
VMP1-204ENST00000587259 BCORQ6W2J9 1755 aa10.3□□□□□ -0.76
VMP1-204ENST00000587259 NBPF26B4DH59 902 aa10.3□□□□□ -0.76
VMP1-204ENST00000587259 FMR1Q06787 632 aaKnown RBP eCLIP10.3□□□□□ -0.76
VMP1-204ENST00000587259 HLFQ16534 295 aa10.3□□□□□ -0.76
VMP1-204ENST00000587259 NBPF10Q6P3W6 841 aaKnown RBP10.3□□□□□ -0.76
VMP1-204ENST00000587259 NGEFQ8N5V2 710 aa10.3□□□□□ -0.76
VMP1-204ENST00000587259 NBPF15Q8N660 670 aa10.3□□□□□ -0.76
VMP1-204ENST00000587259 CNKSR1Q969H4 720 aa10.3□□□□□ -0.76
VMP1-204ENST00000587259 MASTLQ96GX5 879 aa10.3□□□□□ -0.76
VMP1-204ENST00000587259 TEX13AQ9BXU3 409 aaPredicted RBP10.3□□□□□ -0.76
VMP1-204ENST00000587259 TAF1DQ9H5J8 278 aaPredicted RBP10.3□□□□□ -0.76
VMP1-204ENST00000587259 DICER1Q9UPY3 1922 aaKnown RBP10.3□□□□□ -0.76
VMP1-204ENST00000587259 LTBP3Q9NS15 1303 aa10.3□□□□□ -0.76
VMP1-204ENST00000587259 VEGFBP49765 207 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms