RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 CREBZFQ9NS37 354 aa19.06■□□□□ 0.64
CXXC1-208ENST00000587170 THSD7BQ9C0I4 1608 aa19.05■□□□□ 0.64
CXXC1-208ENST00000587170 CHADLQ6NUI6 762 aa19.05■□□□□ 0.64
CXXC1-208ENST00000587170 SETDB2Q96T68 719 aa19.05■□□□□ 0.64
CXXC1-208ENST00000587170 A1BGP04217 495 aa19.04■□□□□ 0.64
CXXC1-208ENST00000587170 ST5P78524 1137 aa19.04■□□□□ 0.64
CXXC1-208ENST00000587170 CCDC24Q8N4L8 307 aa19.04■□□□□ 0.64
CXXC1-208ENST00000587170 L3MBTL3Q96JM7 780 aaPredicted RBP19.04■□□□□ 0.64
CXXC1-208ENST00000587170 TRPM7Q96QT4 1865 aa19.04■□□□□ 0.64
CXXC1-208ENST00000587170 RGL2O15211 777 aa19.03■□□□□ 0.64
CXXC1-208ENST00000587170 C7orf43Q8WVR3 580 aa19.03■□□□□ 0.64
CXXC1-208ENST00000587170 MASTLQ96GX5 879 aa19.03■□□□□ 0.64
CXXC1-208ENST00000587170 ZNF330Q9Y3S2 320 aaPredicted RBP19.03■□□□□ 0.64
CXXC1-208ENST00000587170 PASKQ96RG2 1323 aa19.02■□□□□ 0.64
CXXC1-208ENST00000587170 SNED1Q8TER0 1413 aa19.02■□□□□ 0.64
CXXC1-208ENST00000587170 KLRG2A4D1S0 409 aaPredicted RBP19.02■□□□□ 0.64
CXXC1-208ENST00000587170 U2SURPO15042 1029 aaKnown RBP19.02■□□□□ 0.64
CXXC1-208ENST00000587170 POTEIP0CG38 1075 aa19.02■□□□□ 0.64
CXXC1-208ENST00000587170 POTEJP0CG39 1038 aa19.02■□□□□ 0.64
CXXC1-208ENST00000587170 CLEC4GQ6UXB4 293 aa19.02■□□□□ 0.64
CXXC1-208ENST00000587170 DZIP3Q86Y13 1208 aaKnown RBP19.02■□□□□ 0.64
CXXC1-208ENST00000587170 ZNF219Q9P2Y4 722 aaPredicted RBP19.02■□□□□ 0.64
CXXC1-208ENST00000587170 CNTNAP1P78357 1384 aa19.02■□□□□ 0.64
CXXC1-208ENST00000587170 DDNO94850 711 aaPredicted RBP19.01■□□□□ 0.63
CXXC1-208ENST00000587170 RSPH6AQ9H0K4 717 aa19.01■□□□□ 0.63
CXXC1-208ENST00000587170 KCNQ3O43525 872 aa19■□□□□ 0.63
CXXC1-208ENST00000587170 CAPN15O75808 1086 aa19■□□□□ 0.63
CXXC1-208ENST00000587170 PHACTR3Q96KR7 559 aa19■□□□□ 0.63
CXXC1-208ENST00000587170 LTBP1Q14766 1721 aa19■□□□□ 0.63
CXXC1-208ENST00000587170 IQCA1LA6NCM1 817 aa18.99■□□□□ 0.63
CXXC1-208ENST00000587170 BTBD11A6QL63 1104 aa18.99■□□□□ 0.63
CXXC1-208ENST00000587170 LDHDQ86WU2 507 aa18.99■□□□□ 0.63
CXXC1-208ENST00000587170 CCDC93Q567U6 631 aa18.98■□□□□ 0.63
CXXC1-208ENST00000587170 NPM2Q86SE8 214 aaKnown RBP18.98■□□□□ 0.63
CXXC1-208ENST00000587170 ZNF652Q9Y2D9 606 aa18.98■□□□□ 0.63
CXXC1-208ENST00000587170 USP16Q9Y5T5 823 aa18.98■□□□□ 0.63
CXXC1-208ENST00000587170 ANKRD36CQ5JPF3 1778 aa18.98■□□□□ 0.63
CXXC1-208ENST00000587170 LAMB2P55268 1798 aa18.97■□□□□ 0.63
CXXC1-208ENST00000587170 NPR1P16066 1061 aa18.97■□□□□ 0.63
CXXC1-208ENST00000587170 PRKAR2BP31323 418 aa18.97■□□□□ 0.63
CXXC1-208ENST00000587170 NBPF5PQ86XG9 351 aaPredicted RBP18.97■□□□□ 0.63
CXXC1-208ENST00000587170 TAF1DQ9H5J8 278 aaPredicted RBP18.97■□□□□ 0.63
CXXC1-208ENST00000587170 RIC1Q4ADV7 1423 aa18.97■□□□□ 0.63
CXXC1-208ENST00000587170 NPHP1O15259 732 aa18.96■□□□□ 0.63
CXXC1-208ENST00000587170 FKBP4Q02790 459 aaKnown RBP eCLIP18.96■□□□□ 0.63
CXXC1-208ENST00000587170 CCER1Q8TC90 406 aaPredicted RBP18.96■□□□□ 0.63
CXXC1-208ENST00000587170 MKRN1Q9UHC7 482 aaKnown RBP18.96■□□□□ 0.63
CXXC1-208ENST00000587170 ZNF541Q9H0D2 1346 aa18.96■□□□□ 0.63
CXXC1-208ENST00000587170 COL4A5P29400 1685 aa18.95■□□□□ 0.62
CXXC1-208ENST00000587170 PRAMEF22A3QJZ6 481 aa18.95■□□□□ 0.62
CXXC1-208ENST00000587170 SNRPA1P09661 255 aaKnown RBP18.95■□□□□ 0.62
CXXC1-208ENST00000587170 NBPF26B4DH59 902 aa18.94■□□□□ 0.62
CXXC1-208ENST00000587170 ITGBL1O95965 494 aaPredicted RBP18.94■□□□□ 0.62
CXXC1-208ENST00000587170 PIP4K2AP48426 406 aaPredicted RBP18.94■□□□□ 0.62
CXXC1-208ENST00000587170 NBPF10Q6P3W6 841 aaKnown RBP18.94■□□□□ 0.62
CXXC1-208ENST00000587170 NBPF15Q8N660 670 aa18.94■□□□□ 0.62
CXXC1-208ENST00000587170 PRDM10Q9NQV6 1147 aa18.93■□□□□ 0.62
CXXC1-208ENST00000587170 FOXN1O15353 648 aa18.92■□□□□ 0.62
CXXC1-208ENST00000587170 TPTE2Q6XPS3 522 aa18.92■□□□□ 0.62
CXXC1-208ENST00000587170 RTKN2Q8IZC4 609 aa18.92■□□□□ 0.62
CXXC1-208ENST00000587170 IBTKQ9P2D0 1353 aaPredicted RBP18.92■□□□□ 0.62
CXXC1-208ENST00000587170 TMEM88BA6NKF7 163 aa18.91■□□□□ 0.62
CXXC1-208ENST00000587170 FZD9O00144 591 aa18.91■□□□□ 0.62
CXXC1-208ENST00000587170 HTATSF1O43719 755 aaKnown RBP18.91■□□□□ 0.62
CXXC1-208ENST00000587170 CRY2Q49AN0 593 aa18.91■□□□□ 0.62
CXXC1-208ENST00000587170 CFAP53Q96M91 514 aa18.91■□□□□ 0.62
CXXC1-208ENST00000587170 ZNF277Q9NRM2 450 aaPredicted RBP18.91■□□□□ 0.62
CXXC1-208ENST00000587170 HACL1Q9UJ83 578 aa18.91■□□□□ 0.62
CXXC1-208ENST00000587170 NIP7Q9Y221 180 aaKnown RBP eCLIP18.91■□□□□ 0.62
CXXC1-208ENST00000587170 OLFM4Q6UX06 510 aa18.9■□□□□ 0.62
CXXC1-208ENST00000587170 MCM10Q7L590 875 aa18.9■□□□□ 0.62
CXXC1-208ENST00000587170 ABCC12Q96J65 1359 aa18.9■□□□□ 0.62
CXXC1-208ENST00000587170 EPHX2P34913 555 aa18.89■□□□□ 0.61
CXXC1-208ENST00000587170 VEGFBP49765 207 aa18.89■□□□□ 0.61
CXXC1-208ENST00000587170 PSMD1Q99460 953 aa18.89■□□□□ 0.61
CXXC1-208ENST00000587170 RASSF10A6NK89 507 aa18.88■□□□□ 0.61
CXXC1-208ENST00000587170 ALDH1B1P30837 517 aa18.88■□□□□ 0.61
CXXC1-208ENST00000587170 IARSP41252 1262 aaKnown RBP18.88■□□□□ 0.61
CXXC1-208ENST00000587170 PNMA8AQ86V59 439 aaPredicted RBP18.88■□□□□ 0.61
CXXC1-208ENST00000587170 GPC2Q8N158 579 aa18.88■□□□□ 0.61
CXXC1-208ENST00000587170 RTF1Q92541 710 aaKnown RBP18.88■□□□□ 0.61
CXXC1-208ENST00000587170 NUDCQ9Y266 331 aa18.88■□□□□ 0.61
CXXC1-208ENST00000587170 CTCFP49711 727 aaPredicted RBP18.87■□□□□ 0.61
CXXC1-208ENST00000587170 HLFQ16534 295 aa18.87■□□□□ 0.61
CXXC1-208ENST00000587170 RNF123Q5XPI4 1314 aa18.87■□□□□ 0.61
CXXC1-208ENST00000587170 WBP1LQ9NX94 342 aa18.87■□□□□ 0.61
CXXC1-208ENST00000587170 LRRC37AA6NMS7 1700 aa18.86■□□□□ 0.61
CXXC1-208ENST00000587170 ERVV-1B6SEH8 477 aa18.85■□□□□ 0.61
CXXC1-208ENST00000587170 U2AF1L5P0DN76 240 aaPredicted RBP18.85■□□□□ 0.61
CXXC1-208ENST00000587170 U2AF1Q01081 240 aaKnown RBP eCLIP18.85■□□□□ 0.617e-6■■■■□ 20
CXXC1-208ENST00000587170 EAPPQ56P03 285 aaPredicted RBP18.85■□□□□ 0.61
CXXC1-208ENST00000587170 PPP2R1AP30153 589 aa18.84■□□□□ 0.61
CXXC1-208ENST00000587170 HOXA10P31260 410 aaPredicted RBP18.84■□□□□ 0.61
CXXC1-208ENST00000587170 DCTN1Q14203 1278 aa18.84■□□□□ 0.61
CXXC1-208ENST00000587170 TAF7Q15545 349 aaPredicted RBP18.84■□□□□ 0.61
CXXC1-208ENST00000587170 CC2D2BQ6DHV5 1058 aa18.84■□□□□ 0.61
CXXC1-208ENST00000587170 SYNE4Q8N205 404 aa18.84■□□□□ 0.61
CXXC1-208ENST00000587170 AIDAQ96BJ3 306 aa18.84■□□□□ 0.61
CXXC1-208ENST00000587170 NYXQ9GZU5 481 aa18.84■□□□□ 0.61
CXXC1-208ENST00000587170 CNTROBQ8N137 903 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms