RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 DZIP3Q86Y13 1208 aaKnown RBP18.66■□□□□ 0.58
CALR-204ENST00000586967 PROM2Q8N271 834 aa18.66■□□□□ 0.58
CALR-204ENST00000586967 PI4KAP1Q8N8J0 262 aa18.66■□□□□ 0.58
CALR-204ENST00000586967 ARXQ96QS3 562 aa18.66■□□□□ 0.58
CALR-204ENST00000586967 AAMPQ13685 434 aa18.65■□□□□ 0.58
CALR-204ENST00000586967 EZH2Q15910 746 aaKnown RBP18.65■□□□□ 0.58
CALR-204ENST00000586967 CLUAP1Q96AJ1 413 aa18.65■□□□□ 0.58
CALR-204ENST00000586967 ZNF652Q9Y2D9 606 aa18.65■□□□□ 0.58
CALR-204ENST00000586967 MAP3K2Q9Y2U5 619 aa18.65■□□□□ 0.58
CALR-204ENST00000586967 MAP3K15Q6ZN16 1313 aa18.65■□□□□ 0.58
CALR-204ENST00000586967 TRAPPC3LQ5T215 181 aa18.64■□□□□ 0.57
CALR-204ENST00000586967 ERICH6BQ5W0A0 696 aa18.64■□□□□ 0.57
CALR-204ENST00000586967 INTS3Q68E01 1043 aaKnown RBP18.64■□□□□ 0.57
CALR-204ENST00000586967 SLC4A10Q6U841 1118 aa18.64■□□□□ 0.57
CALR-204ENST00000586967 DDX19BQ9UMR2 479 aa18.64■□□□□ 0.57
CALR-204ENST00000586967 ADCY9O60503 1353 aa18.64■□□□□ 0.57
CALR-204ENST00000586967 ATP10DQ9P241 1426 aa18.64■□□□□ 0.57
CALR-204ENST00000586967 N4BP2Q86UW6 1770 aaPredicted RBP18.63■□□□□ 0.57
CALR-204ENST00000586967 ARFGEF2Q9Y6D5 1785 aa18.63■□□□□ 0.57
CALR-204ENST00000586967 ZPR1O75312 459 aa18.63■□□□□ 0.57
CALR-204ENST00000586967 METTL22Q9BUU2 404 aaPredicted RBP18.63■□□□□ 0.57
CALR-204ENST00000586967 SRCIN1Q9C0H9 1055 aa18.63■□□□□ 0.57
CALR-204ENST00000586967 STK32BQ9NY57 414 aa18.63■□□□□ 0.57
CALR-204ENST00000586967 RFC4P35249 363 aa18.62■□□□□ 0.57
CALR-204ENST00000586967 MVPQ14764 893 aaKnown RBP18.62■□□□□ 0.57
CALR-204ENST00000586967 ITPRIPQ8IWB1 547 aa18.62■□□□□ 0.57
CALR-204ENST00000586967 UPF1Q92900 1129 aaKnown RBP eCLIP18.62■□□□□ 0.576e-25■■■■■ 35.5
CALR-204ENST00000586967 TFCP2L1Q9NZI6 479 aa18.62■□□□□ 0.57
CALR-204ENST00000586967 HDAC5Q9UQL6 1122 aa18.62■□□□□ 0.57
CALR-204ENST00000586967 IBTKQ9P2D0 1353 aaPredicted RBP18.62■□□□□ 0.57
CALR-204ENST00000586967 NUP188Q5SRE5 1749 aa18.62■□□□□ 0.57
CALR-204ENST00000586967 UBR3Q6ZT12 1888 aa18.62■□□□□ 0.57
CALR-204ENST00000586967 F6X3S4 739 aa18.61■□□□□ 0.57
CALR-204ENST00000586967 ALDH1L1O75891 902 aa18.61■□□□□ 0.57
CALR-204ENST00000586967 CLEC4GQ6UXB4 293 aa18.61■□□□□ 0.57
CALR-204ENST00000586967 GIGYF2Q6Y7W6 1299 aaKnown RBP18.61■□□□□ 0.57
CALR-204ENST00000586967 TTLL7Q6ZT98 887 aa18.61■□□□□ 0.57
CALR-204ENST00000586967 LINS1Q8NG48 757 aa18.61■□□□□ 0.57
CALR-204ENST00000586967 PANK1Q8TE04 598 aa18.61■□□□□ 0.57
CALR-204ENST00000586967 AKT1S1Q96B36 256 aa18.61■□□□□ 0.57
CALR-204ENST00000586967 ZBTB3Q9H5J0 574 aa18.61■□□□□ 0.57
CALR-204ENST00000586967 NARFQ9UHQ1 456 aa18.61■□□□□ 0.57
CALR-204ENST00000586967 DEFB132Q7Z7B7 95 aa18.6■□□□□ 0.57
CALR-204ENST00000586967 TMEM57Q8N5G2 664 aa18.6■□□□□ 0.57
CALR-204ENST00000586967 TBC1D2BQ9UPU7 963 aa18.6■□□□□ 0.57
CALR-204ENST00000586967 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.59■□□□□ 0.57
CALR-204ENST00000586967 COG6Q9Y2V7 657 aa18.59■□□□□ 0.57
CALR-204ENST00000586967 BCORQ6W2J9 1755 aa18.59■□□□□ 0.57
CALR-204ENST00000586967 QSER1Q2KHR3 1735 aa18.59■□□□□ 0.57
CALR-204ENST00000586967 SCN7AQ01118 1682 aa18.58■□□□□ 0.57
CALR-204ENST00000586967 PHF14O94880 888 aa18.58■□□□□ 0.56
CALR-204ENST00000586967 RLBP1P12271 317 aa18.58■□□□□ 0.56
CALR-204ENST00000586967 TCIRG1Q13488 830 aa18.58■□□□□ 0.56
CALR-204ENST00000586967 BEND3Q5T5X7 828 aa18.58■□□□□ 0.56
CALR-204ENST00000586967 C20orf194Q5TEA3 1177 aa18.58■□□□□ 0.56
CALR-204ENST00000586967 ARHGEF1Q92888 912 aaKnown RBP18.58■□□□□ 0.56
CALR-204ENST00000586967 MYD88Q99836 296 aa18.58■□□□□ 0.56
CALR-204ENST00000586967 CAMTA2O94983 1202 aa18.57■□□□□ 0.56
CALR-204ENST00000586967 GNAI3P08754 354 aa18.57■□□□□ 0.56
CALR-204ENST00000586967 SLC15A2Q16348 729 aa18.57■□□□□ 0.56
CALR-204ENST00000586967 ILDR2Q71H61 639 aa18.57■□□□□ 0.56
CALR-204ENST00000586967 CCDC191Q8NCU4 936 aa18.57■□□□□ 0.56
CALR-204ENST00000586967 NUP98P52948 1817 aa18.57■□□□□ 0.56
CALR-204ENST00000586967 ANKRD36CQ5JPF3 1778 aa18.57■□□□□ 0.56
CALR-204ENST00000586967 USP42Q9H9J4 1324 aaKnown RBP18.56■□□□□ 0.56
CALR-204ENST00000586967 TRIM28Q13263 835 aaKnown RBP18.56■□□□□ 0.56
CALR-204ENST00000586967 FKBP8Q14318 412 aa18.56■□□□□ 0.56
CALR-204ENST00000586967 CRBNQ96SW2 442 aa18.56■□□□□ 0.56
CALR-204ENST00000586967 TNNQ9UQP3 1299 aa18.56■□□□□ 0.56
CALR-204ENST00000586967 C4AP0C0L4 1744 aa18.56■□□□□ 0.56
CALR-204ENST00000586967 IRX6P78412 446 aaPredicted RBP18.55■□□□□ 0.56
CALR-204ENST00000586967 ZNF827Q17R98 1081 aa18.55■□□□□ 0.56
CALR-204ENST00000586967 PARP10Q53GL7 1025 aa18.55■□□□□ 0.56
CALR-204ENST00000586967 CWC25Q9NXE8 425 aaPredicted RBP18.55■□□□□ 0.56
CALR-204ENST00000586967 C9orf78Q9NZ63 289 aaPredicted RBP18.55■□□□□ 0.56
CALR-204ENST00000586967 AFDNP55196 1824 aaKnown RBP18.55■□□□□ 0.56
CALR-204ENST00000586967 NEURL1BA8MQ27 555 aa18.54■□□□□ 0.56
CALR-204ENST00000586967 HSP90B1P14625 803 aaKnown RBP18.54■□□□□ 0.56
CALR-204ENST00000586967 USPL1Q5W0Q7 1092 aa18.54■□□□□ 0.56
CALR-204ENST00000586967 ISCA1Q9BUE6 129 aa18.54■□□□□ 0.56
CALR-204ENST00000586967 MSH5O43196 834 aa18.53■□□□□ 0.56
CALR-204ENST00000586967 TUBGCP6Q96RT7 1819 aa18.52■□□□□ 0.56
CALR-204ENST00000586967 ZBTB7BO15156 539 aaPredicted RBP18.52■□□□□ 0.56
CALR-204ENST00000586967 GCKRQ14397 625 aa18.52■□□□□ 0.56
CALR-204ENST00000586967 HLFQ16534 295 aa18.52■□□□□ 0.56
CALR-204ENST00000586967 PPP1R42Q7Z4L9 355 aa18.52■□□□□ 0.56
CALR-204ENST00000586967 ZNF34Q8IZ26 560 aa18.52■□□□□ 0.56
CALR-204ENST00000586967 GRM8O00222 908 aa18.51■□□□□ 0.55
CALR-204ENST00000586967 IGKV5-2P06315 115 aa18.51■□□□□ 0.55
CALR-204ENST00000586967 UBTFL1P0CB47 393 aaPredicted RBP18.51■□□□□ 0.55
CALR-204ENST00000586967 CWF19L2Q2TBE0 894 aaKnown RBP18.51■□□□□ 0.55
CALR-204ENST00000586967 NLGN1Q8N2Q7 840 aa18.51■□□□□ 0.55
CALR-204ENST00000586967 EXOC6Q8TAG9 804 aa18.51■□□□□ 0.55
CALR-204ENST00000586967 SETDB2Q96T68 719 aa18.51■□□□□ 0.55
CALR-204ENST00000586967 NYXQ9GZU5 481 aa18.51■□□□□ 0.55
CALR-204ENST00000586967 NIP7Q9Y221 180 aaKnown RBP eCLIP18.51■□□□□ 0.55
CALR-204ENST00000586967 PNPLA7Q6ZV29 1317 aa18.5■□□□□ 0.55
CALR-204ENST00000586967 ATP5J2-PTCD1G3V325 749 aa18.5■□□□□ 0.55
CALR-204ENST00000586967 ANO8Q9HCE9 1232 aaPredicted RBP18.5■□□□□ 0.55
CALR-204ENST00000586967 UTYO14607 1347 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms