RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 TTLL7Q6ZT98 887 aa24.59■■□□□ 1.53
DDX39A-204ENST00000586558 COPS6Q7L5N1 327 aa24.59■■□□□ 1.53
DDX39A-204ENST00000586558 XAGE3Q8WTP9 111 aa24.59■■□□□ 1.53
DDX39A-204ENST00000586558 BCL2L12Q9HB09 334 aa24.59■■□□□ 1.53
DDX39A-204ENST00000586558 BCORQ6W2J9 1755 aa24.59■■□□□ 1.53
DDX39A-204ENST00000586558 PTGER2P43116 358 aa24.58■■□□□ 1.53
DDX39A-204ENST00000586558 FKBP8Q14318 412 aa24.58■■□□□ 1.53
DDX39A-204ENST00000586558 SGIP1Q9BQI5 828 aa24.58■■□□□ 1.53
DDX39A-204ENST00000586558 LRP5O75197 1615 aa24.57■■□□□ 1.52
DDX39A-204ENST00000586558 SLC4A2P04920 1241 aa24.57■■□□□ 1.52
DDX39A-204ENST00000586558 SRCAPQ6ZRS2 3230 aa24.57■■□□□ 1.52
DDX39A-204ENST00000586558 AIMP1Q12904 312 aaKnown RBP24.56■■□□□ 1.52
DDX39A-204ENST00000586558 TCERG1O14776 1098 aaKnown RBP24.55■■□□□ 1.52
DDX39A-204ENST00000586558 ALDH1L2Q3SY69 923 aa24.55■■□□□ 1.52
DDX39A-204ENST00000586558 ZBTB3Q9H5J0 574 aa24.55■■□□□ 1.52
DDX39A-204ENST00000586558 DDX58O95786 925 aaKnown RBP24.54■■□□□ 1.52
DDX39A-204ENST00000586558 MMP10P09238 476 aa24.54■■□□□ 1.52
DDX39A-204ENST00000586558 PLBD2Q8NHP8 589 aa24.54■■□□□ 1.52
DDX39A-204ENST00000586558 YTHDC1Q96MU7 727 aaKnown RBP24.54■■□□□ 1.52
DDX39A-204ENST00000586558 PHAXQ9H814 394 aaKnown RBP24.54■■□□□ 1.52
DDX39A-204ENST00000586558 ATP10DQ9P241 1426 aa24.53■■□□□ 1.52
DDX39A-204ENST00000586558 TM4SF1P30408 202 aa24.53■■□□□ 1.52
DDX39A-204ENST00000586558 GIGYF2Q6Y7W6 1299 aaKnown RBP24.53■■□□□ 1.52
DDX39A-204ENST00000586558 ANKRD13DQ6ZTN6 518 aa24.53■■□□□ 1.52
DDX39A-204ENST00000586558 NFIXQ14938 502 aa24.52■■□□□ 1.52
DDX39A-204ENST00000586558 PARP3Q9Y6F1 533 aa24.52■■□□□ 1.52
DDX39A-204ENST00000586558 FLIIQ13045 1269 aa24.51■■□□□ 1.51
DDX39A-204ENST00000586558 HLFQ16534 295 aa24.51■■□□□ 1.51
DDX39A-204ENST00000586558 HSP90AB3PQ58FF7 597 aa24.51■■□□□ 1.51
DDX39A-204ENST00000586558 TBC1D9BQ66K14 1250 aa24.51■■□□□ 1.51
DDX39A-204ENST00000586558 CARMIL3Q8ND23 1372 aa24.51■■□□□ 1.51
DDX39A-204ENST00000586558 CACNA1FO60840 1977 aa24.51■■□□□ 1.51
DDX39A-204ENST00000586558 SSH1Q8WYL5 1049 aa24.5■■□□□ 1.51
DDX39A-204ENST00000586558 SETDB2Q96T68 719 aa24.5■■□□□ 1.51
DDX39A-204ENST00000586558 DDR1Q08345 913 aa24.49■■□□□ 1.51
DDX39A-204ENST00000586558 G2E3Q7L622 706 aa24.49■■□□□ 1.51
DDX39A-204ENST00000586558 POLRMTO00411 1230 aaKnown RBP24.48■■□□□ 1.51
DDX39A-204ENST00000586558 BICDL1Q6ZP65 573 aa24.48■■□□□ 1.51
DDX39A-204ENST00000586558 RIC3Q7Z5B4 369 aa24.48■■□□□ 1.51
DDX39A-204ENST00000586558 MRPL50Q8N5N7 158 aaKnown RBP24.48■■□□□ 1.51
DDX39A-204ENST00000586558 SMC4Q9NTJ3 1288 aa24.48■■□□□ 1.51
DDX39A-204ENST00000586558 PPP1R1BQ9UD71 204 aaPredicted RBP24.48■■□□□ 1.51
DDX39A-204ENST00000586558 NIP7Q9Y221 180 aaKnown RBP eCLIP24.48■■□□□ 1.51
DDX39A-204ENST00000586558 RARSP54136 660 aaKnown RBP24.47■■□□□ 1.51
DDX39A-204ENST00000586558 FKBP5Q13451 457 aaPredicted RBP24.47■■□□□ 1.51
DDX39A-204ENST00000586558 KSR2Q6VAB6 950 aa24.47■■□□□ 1.51
DDX39A-204ENST00000586558 BRPF1P55201 1214 aaPredicted RBP24.46■■□□□ 1.51
DDX39A-204ENST00000586558 TCIRG1Q13488 830 aa24.46■■□□□ 1.51
DDX39A-204ENST00000586558 ZNF34Q8IZ26 560 aa24.46■■□□□ 1.51
DDX39A-204ENST00000586558 NUP98P52948 1817 aa24.45■■□□□ 1.5
DDX39A-204ENST00000586558 PI4KAP2A4QPH2 592 aa24.45■■□□□ 1.5
DDX39A-204ENST00000586558 PARP10Q53GL7 1025 aa24.45■■□□□ 1.5
DDX39A-204ENST00000586558 PI4KAP1Q8N8J0 262 aa24.45■■□□□ 1.5
DDX39A-204ENST00000586558 ADCY9O60503 1353 aa24.44■■□□□ 1.5
DDX39A-204ENST00000586558 IBTKQ9P2D0 1353 aaPredicted RBP24.44■■□□□ 1.5
DDX39A-204ENST00000586558 PTPRCP08575 1304 aa24.44■■□□□ 1.5
DDX39A-204ENST00000586558 SERPINB2P05120 415 aa24.44■■□□□ 1.5
DDX39A-204ENST00000586558 BCL2L13Q9BXK5 485 aa24.44■■□□□ 1.5
DDX39A-204ENST00000586558 MAP3K2Q9Y2U5 619 aa24.44■■□□□ 1.5
DDX39A-204ENST00000586558 ARFGEF2Q9Y6D5 1785 aa24.44■■□□□ 1.5
DDX39A-204ENST00000586558 METTL22Q9BUU2 404 aaPredicted RBP24.43■■□□□ 1.5
DDX39A-204ENST00000586558 UBN2Q6ZU65 1347 aa24.42■■□□□ 1.5
DDX39A-204ENST00000586558 KIF16BQ96L93 1317 aa24.42■■□□□ 1.5
DDX39A-204ENST00000586558 NRXN2Q9P2S2 1712 aa24.42■■□□□ 1.5
DDX39A-204ENST00000586558 GPTP24298 496 aa24.42■■□□□ 1.5
DDX39A-204ENST00000586558 TRIM28Q13263 835 aaKnown RBP24.42■■□□□ 1.5
DDX39A-204ENST00000586558 NBPF5PQ86XG9 351 aaPredicted RBP24.42■■□□□ 1.5
DDX39A-204ENST00000586558 C10orf71Q711Q0 1435 aa24.42■■□□□ 1.5
DDX39A-204ENST00000586558 ANKRD36CQ5JPF3 1778 aa24.42■■□□□ 1.5
DDX39A-204ENST00000586558 NEXNQ0ZGT2 675 aa24.41■■□□□ 1.5
DDX39A-204ENST00000586558 CNBD1Q8NA66 436 aa24.41■■□□□ 1.5
DDX39A-204ENST00000586558 DNAAF4Q8WXU2 420 aa24.41■■□□□ 1.5
DDX39A-204ENST00000586558 ISCA1Q9BUE6 129 aa24.41■■□□□ 1.5
DDX39A-204ENST00000586558 NYXQ9GZU5 481 aa24.41■■□□□ 1.5
DDX39A-204ENST00000586558 CD2APQ9Y5K6 639 aa24.41■■□□□ 1.5
DDX39A-204ENST00000586558 RNF123Q5XPI4 1314 aa24.4■■□□□ 1.5
DDX39A-204ENST00000586558 TPTE2Q6XPS3 522 aa24.4■■□□□ 1.5
DDX39A-204ENST00000586558 PPP1R42Q7Z4L9 355 aa24.4■■□□□ 1.5
DDX39A-204ENST00000586558 NLRP10Q86W26 655 aa24.39■■□□□ 1.49
DDX39A-204ENST00000586558 NPHP1O15259 732 aa24.38■■□□□ 1.49
DDX39A-204ENST00000586558 PRR5LQ6MZQ0 368 aa24.38■■□□□ 1.49
DDX39A-204ENST00000586558 MYD88Q99836 296 aa24.38■■□□□ 1.49
DDX39A-204ENST00000586558 ST5P78524 1137 aa24.37■■□□□ 1.49
DDX39A-204ENST00000586558 SUSD4Q5VX71 490 aa24.37■■□□□ 1.49
DDX39A-204ENST00000586558 CCDC191Q8NCU4 936 aa24.37■■□□□ 1.49
DDX39A-204ENST00000586558 UTP14AQ9BVJ6 771 aaKnown RBP24.37■■□□□ 1.49
DDX39A-204ENST00000586558 FHDC1Q9C0D6 1143 aaPredicted RBP24.37■■□□□ 1.49
DDX39A-204ENST00000586558 AFDNP55196 1824 aaKnown RBP24.36■■□□□ 1.49
DDX39A-204ENST00000586558 ATP5J2-PTCD1G3V325 749 aa24.36■■□□□ 1.49
DDX39A-204ENST00000586558 NTSR2O95665 410 aa24.36■■□□□ 1.49
DDX39A-204ENST00000586558 LINS1Q8NG48 757 aa24.36■■□□□ 1.49
DDX39A-204ENST00000586558 ARHGAP45Q92619 1136 aa24.36■■□□□ 1.49
DDX39A-204ENST00000586558 F6X3S4 739 aa24.35■■□□□ 1.49
DDX39A-204ENST00000586558 IPO8O15397 1037 aaKnown RBP24.35■■□□□ 1.49
DDX39A-204ENST00000586558 GTF2E1P29083 439 aaPredicted RBP24.35■■□□□ 1.49
DDX39A-204ENST00000586558 API5Q9BZZ5 524 aaKnown RBP24.35■■□□□ 1.49
DDX39A-204ENST00000586558 NOB1Q9ULX3 412 aaKnown RBP24.35■■□□□ 1.49
DDX39A-204ENST00000586558 FAM177BA6PVY3 158 aa24.34■■□□□ 1.49
DDX39A-204ENST00000586558 BCAR3O75815 825 aa24.34■■□□□ 1.49
DDX39A-204ENST00000586558 IGKV5-2P06315 115 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms