RNA–Protein interactions for RNA: ENST00000586365.5

CXXC1-204, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-204ENST00000586365 POTEJP0CG39 1038 aa26.65■■□□□ 1.86
CXXC1-204ENST00000586365 CACNA1SQ13698 1873 aa26.63■■□□□ 1.85
CXXC1-204ENST00000586365 SIPA1L3O60292 1781 aaPredicted RBP26.62■■□□□ 1.85
CXXC1-204ENST00000586365 CC2D1BQ5T0F9 858 aaKnown RBP26.62■■□□□ 1.85
CXXC1-204ENST00000586365 LDHDQ86WU2 507 aa26.62■■□□□ 1.85
CXXC1-204ENST00000586365 U2SURPO15042 1029 aaKnown RBP26.61■■□□□ 1.85
CXXC1-204ENST00000586365 PER1O15534 1290 aaPredicted RBP26.61■■□□□ 1.85
CXXC1-204ENST00000586365 DZIP3Q86Y13 1208 aaKnown RBP26.61■■□□□ 1.85
CXXC1-204ENST00000586365 L3MBTL3Q96JM7 780 aaPredicted RBP26.61■■□□□ 1.85
CXXC1-204ENST00000586365 ARFGEF2Q9Y6D5 1785 aa26.61■■□□□ 1.85
CXXC1-204ENST00000586365 SCN4AP35499 1836 aa26.6■■□□□ 1.85
CXXC1-204ENST00000586365 CNTNAP1P78357 1384 aa26.6■■□□□ 1.85
CXXC1-204ENST00000586365 KIF7Q2M1P5 1343 aa26.6■■□□□ 1.85
CXXC1-204ENST00000586365 PASKQ96RG2 1323 aa26.6■■□□□ 1.85
CXXC1-204ENST00000586365 C7orf43Q8WVR3 580 aa26.59■■□□□ 1.85
CXXC1-204ENST00000586365 TAF1DQ9H5J8 278 aaPredicted RBP26.59■■□□□ 1.85
CXXC1-204ENST00000586365 FOXN1O15353 648 aa26.58■■□□□ 1.85
CXXC1-204ENST00000586365 CCDC93Q567U6 631 aa26.58■■□□□ 1.85
CXXC1-204ENST00000586365 CLEC4GQ6UXB4 293 aa26.58■■□□□ 1.85
CXXC1-204ENST00000586365 PRDM10Q9NQV6 1147 aa26.58■■□□□ 1.85
CXXC1-204ENST00000586365 BTBD11A6QL63 1104 aa26.57■■□□□ 1.84
CXXC1-204ENST00000586365 NBPF5PQ86XG9 351 aaPredicted RBP26.57■■□□□ 1.84
CXXC1-204ENST00000586365 CEMIPQ8WUJ3 1361 aa26.57■■□□□ 1.84
CXXC1-204ENST00000586365 BCORQ6W2J9 1755 aa26.56■■□□□ 1.84
CXXC1-204ENST00000586365 NPR1P16066 1061 aa26.56■■□□□ 1.84
CXXC1-204ENST00000586365 TMEM88BA6NKF7 163 aa26.55■■□□□ 1.84
CXXC1-204ENST00000586365 KCNQ3O43525 872 aa26.55■■□□□ 1.84
CXXC1-204ENST00000586365 AIDAQ96BJ3 306 aa26.55■■□□□ 1.84
CXXC1-204ENST00000586365 ZNF652Q9Y2D9 606 aa26.55■■□□□ 1.84
CXXC1-204ENST00000586365 USP16Q9Y5T5 823 aa26.55■■□□□ 1.84
CXXC1-204ENST00000586365 COL3A1P02461 1466 aaPredicted RBP26.55■■□□□ 1.84
CXXC1-204ENST00000586365 ITGBL1O95965 494 aaPredicted RBP26.54■■□□□ 1.84
CXXC1-204ENST00000586365 FKBP4Q02790 459 aaKnown RBP eCLIP26.54■■□□□ 1.84
CXXC1-204ENST00000586365 CTCFP49711 727 aaPredicted RBP26.53■■□□□ 1.84
CXXC1-204ENST00000586365 KLRG2A4D1S0 409 aaPredicted RBP26.52■■□□□ 1.84
CXXC1-204ENST00000586365 VEGFBP49765 207 aa26.52■■□□□ 1.84
CXXC1-204ENST00000586365 EAPPQ56P03 285 aaPredicted RBP26.52■■□□□ 1.84
CXXC1-204ENST00000586365 TPTE2Q6XPS3 522 aa26.52■■□□□ 1.84
CXXC1-204ENST00000586365 RTKN2Q8IZC4 609 aa26.52■■□□□ 1.84
CXXC1-204ENST00000586365 HACL1Q9UJ83 578 aa26.52■■□□□ 1.84
CXXC1-204ENST00000586365 PIP4K2AP48426 406 aaPredicted RBP26.51■■□□□ 1.83
CXXC1-204ENST00000586365 ZNF277Q9NRM2 450 aaPredicted RBP26.51■■□□□ 1.83
CXXC1-204ENST00000586365 CLEC11AQ9Y240 323 aa26.51■■□□□ 1.83
CXXC1-204ENST00000586365 PHACTR3Q96KR7 559 aa26.5■■□□□ 1.83
CXXC1-204ENST00000586365 NPC1L1Q9UHC9 1359 aa26.49■■□□□ 1.83
CXXC1-204ENST00000586365 ZNF541Q9H0D2 1346 aa26.49■■□□□ 1.83
CXXC1-204ENST00000586365 RGL2O15211 777 aa26.49■■□□□ 1.83
CXXC1-204ENST00000586365 SNRPA1P09661 255 aaKnown RBP26.49■■□□□ 1.83
CXXC1-204ENST00000586365 PNMA8AQ86V59 439 aaPredicted RBP26.49■■□□□ 1.83
CXXC1-204ENST00000586365 EPHX2P34913 555 aa26.48■■□□□ 1.83
CXXC1-204ENST00000586365 CCER1Q8TC90 406 aaPredicted RBP26.48■■□□□ 1.83
CXXC1-204ENST00000586365 WBP1LQ9NX94 342 aa26.48■■□□□ 1.83
CXXC1-204ENST00000586365 NIP7Q9Y221 180 aaKnown RBP eCLIP26.48■■□□□ 1.83
CXXC1-204ENST00000586365 ALDH1B1P30837 517 aa26.47■■□□□ 1.83
CXXC1-204ENST00000586365 PRKAR2BP31323 418 aa26.47■■□□□ 1.83
CXXC1-204ENST00000586365 PRAMEF22A3QJZ6 481 aa26.46■■□□□ 1.83
CXXC1-204ENST00000586365 CNGB1Q14028 1251 aaPredicted RBP26.46■■□□□ 1.83
CXXC1-204ENST00000586365 FZD9O00144 591 aa26.45■■□□□ 1.82
CXXC1-204ENST00000586365 IARSP41252 1262 aaKnown RBP26.45■■□□□ 1.82
CXXC1-204ENST00000586365 DEFB115Q30KQ5 88 aa26.45■■□□□ 1.82
CXXC1-204ENST00000586365 OLFM4Q6UX06 510 aa26.45■■□□□ 1.82
CXXC1-204ENST00000586365 CNTROBQ8N137 903 aa26.45■■□□□ 1.82
CXXC1-204ENST00000586365 SYNE4Q8N205 404 aa26.45■■□□□ 1.82
CXXC1-204ENST00000586365 RTF1Q92541 710 aaKnown RBP26.44■■□□□ 1.82
CXXC1-204ENST00000586365 RSPH6AQ9H0K4 717 aa26.44■■□□□ 1.82
CXXC1-204ENST00000586365 ADAMTSL1Q8N6G6 1762 aa26.43■■□□□ 1.82
CXXC1-204ENST00000586365 RASSF10A6NK89 507 aa26.43■■□□□ 1.82
CXXC1-204ENST00000586365 LBX1P52954 281 aa26.43■■□□□ 1.82
CXXC1-204ENST00000586365 GPC2Q8N158 579 aa26.43■■□□□ 1.82
CXXC1-204ENST00000586365 CFAP53Q96M91 514 aa26.43■■□□□ 1.82
CXXC1-204ENST00000586365 RNF123Q5XPI4 1314 aa26.42■■□□□ 1.82
CXXC1-204ENST00000586365 FAM177BA6PVY3 158 aa26.42■■□□□ 1.82
CXXC1-204ENST00000586365 NBPF26B4DH59 902 aa26.42■■□□□ 1.82
CXXC1-204ENST00000586365 GTF2E1P29083 439 aaPredicted RBP26.42■■□□□ 1.82
CXXC1-204ENST00000586365 MAP1SQ66K74 1059 aaPredicted RBP26.42■■□□□ 1.82
CXXC1-204ENST00000586365 NBPF10Q6P3W6 841 aaKnown RBP26.42■■□□□ 1.82
CXXC1-204ENST00000586365 NBPF15Q8N660 670 aa26.42■■□□□ 1.82
CXXC1-204ENST00000586365 JDP2Q8WYK2 163 aa26.41■■□□□ 1.82
CXXC1-204ENST00000586365 NUDCQ9Y266 331 aa26.41■■□□□ 1.82
CXXC1-204ENST00000586365 MAP2K1Q02750 393 aaPredicted RBP26.4■■□□□ 1.82
CXXC1-204ENST00000586365 MCM10Q7L590 875 aa26.4■■□□□ 1.82
CXXC1-204ENST00000586365 PSMD1Q99460 953 aa26.4■■□□□ 1.82
CXXC1-204ENST00000586365 HLFQ16534 295 aa26.38■■□□□ 1.81
CXXC1-204ENST00000586365 CC2D2BQ6DHV5 1058 aa26.38■■□□□ 1.81
CXXC1-204ENST00000586365 ABT1Q9ULW3 272 aaKnown RBP26.38■■□□□ 1.81
CXXC1-204ENST00000586365 WDR33Q9C0J8 1336 aaKnown RBP26.38■■□□□ 1.81
CXXC1-204ENST00000586365 HSPA8P11142 646 aaKnown RBP26.37■■□□□ 1.81
CXXC1-204ENST00000586365 HTATSF1O43719 755 aaKnown RBP26.36■■□□□ 1.81
CXXC1-204ENST00000586365 EIF6P56537 245 aaKnown RBP26.36■■□□□ 1.81
CXXC1-204ENST00000586365 NYXQ9GZU5 481 aa26.36■■□□□ 1.81
CXXC1-204ENST00000586365 U2AF1L5P0DN76 240 aaPredicted RBP26.35■■□□□ 1.81
CXXC1-204ENST00000586365 U2AF1Q01081 240 aaKnown RBP eCLIP26.35■■□□□ 1.81
CXXC1-204ENST00000586365 CRY2Q49AN0 593 aa26.35■■□□□ 1.81
CXXC1-204ENST00000586365 DDX21Q9NR30 783 aaKnown RBP eCLIP26.35■■□□□ 1.81
CXXC1-204ENST00000586365 LMOD1P29536 600 aaPredicted RBP26.34■■□□□ 1.81
CXXC1-204ENST00000586365 GRIPAP1Q4V328 841 aa26.34■■□□□ 1.81
CXXC1-204ENST00000586365 GJA3Q9Y6H8 435 aa26.34■■□□□ 1.81
CXXC1-204ENST00000586365 SNED1Q8TER0 1413 aa26.33■■□□□ 1.81
CXXC1-204ENST00000586365 DCTN1Q14203 1278 aa26.33■■□□□ 1.81
CXXC1-204ENST00000586365 TAF7Q15545 349 aaPredicted RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms