RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 SMC1BQ8NDV3 1235 aa14.09□□□□□ -0.15
MBD3-203ENST00000585903 CNKSR1Q969H4 720 aa14.09□□□□□ -0.15
MBD3-203ENST00000585903 TBC1D2BQ9UPU7 963 aa14.09□□□□□ -0.15
MBD3-203ENST00000585903 NFKBIEO00221 500 aa14.08□□□□□ -0.16
MBD3-203ENST00000585903 VEGFAP15692 232 aaPredicted RBP14.08□□□□□ -0.16
MBD3-203ENST00000585903 ST5P78524 1137 aa14.08□□□□□ -0.16
MBD3-203ENST00000585903 DZIP3Q86Y13 1208 aaKnown RBP14.08□□□□□ -0.16
MBD3-203ENST00000585903 PNISRQ8TF01 805 aaKnown RBP14.08□□□□□ -0.16
MBD3-203ENST00000585903 DLG5Q8TDM6 1919 aa14.07□□□□□ -0.16
MBD3-203ENST00000585903 KLRG2A4D1S0 409 aaPredicted RBP14.07□□□□□ -0.16
MBD3-203ENST00000585903 ZNF316A6NFI3 1004 aaPredicted RBP14.07□□□□□ -0.16
MBD3-203ENST00000585903 NEFMP07197 916 aa14.07□□□□□ -0.16
MBD3-203ENST00000585903 RASSF7Q02833 373 aa14.07□□□□□ -0.16
MBD3-203ENST00000585903 TAF7Q15545 349 aaPredicted RBP14.07□□□□□ -0.16
MBD3-203ENST00000585903 BICDL1Q6ZP65 573 aa14.07□□□□□ -0.16
MBD3-203ENST00000585903 PNNQ9H307 717 aaKnown RBP14.07□□□□□ -0.16
MBD3-203ENST00000585903 RRAGCQ9HB90 399 aa14.07□□□□□ -0.16
MBD3-203ENST00000585903 USP16Q9Y5T5 823 aa14.07□□□□□ -0.16
MBD3-203ENST00000585903 KDM3BQ7LBC6 1761 aa14.06□□□□□ -0.16
MBD3-203ENST00000585903 KCNQ3O43525 872 aa14.06□□□□□ -0.16
MBD3-203ENST00000585903 SRGNP10124 158 aa14.06□□□□□ -0.16
MBD3-203ENST00000585903 DPY19L2Q6NUT2 758 aa14.06□□□□□ -0.16
MBD3-203ENST00000585903 MASTLQ96GX5 879 aa14.06□□□□□ -0.16
MBD3-203ENST00000585903 MCM10Q7L590 875 aa14.05□□□□□ -0.16
MBD3-203ENST00000585903 ZNF330Q9Y3S2 320 aaPredicted RBP14.05□□□□□ -0.16
MBD3-203ENST00000585903 SLX4Q8IY92 1834 aa14.05□□□□□ -0.16
MBD3-203ENST00000585903 NPHP1O15259 732 aa14.04□□□□□ -0.16
MBD3-203ENST00000585903 TPTE2Q6XPS3 522 aa14.04□□□□□ -0.16
MBD3-203ENST00000585903 ZNF622Q969S3 477 aaKnown RBP eCLIP14.04□□□□□ -0.16
MBD3-203ENST00000585903 TAOK3Q9H2K8 898 aa14.04□□□□□ -0.16
MBD3-203ENST00000585903 ERVV-1B6SEH8 477 aa14.03□□□□□ -0.16
MBD3-203ENST00000585903 NPR1P16066 1061 aa14.03□□□□□ -0.16
MBD3-203ENST00000585903 CNGB1Q14028 1251 aaPredicted RBP14.03□□□□□ -0.16
MBD3-203ENST00000585903 PRPF40BQ6NWY9 871 aaKnown RBP14.03□□□□□ -0.16
MBD3-203ENST00000585903 NBPF5PQ86XG9 351 aaPredicted RBP14.03□□□□□ -0.16
MBD3-203ENST00000585903 RIC1Q4ADV7 1423 aa14.03□□□□□ -0.16
MBD3-203ENST00000585903 CACNA1SQ13698 1873 aa14.03□□□□□ -0.16
MBD3-203ENST00000585903 SCN4AP35499 1836 aa14.02□□□□□ -0.16
MBD3-203ENST00000585903 IBTKQ9P2D0 1353 aaPredicted RBP14.02□□□□□ -0.17
MBD3-203ENST00000585903 ERBB4Q15303 1308 aa14.02□□□□□ -0.17
MBD3-203ENST00000585903 C21orf2O43822 256 aa14.02□□□□□ -0.17
MBD3-203ENST00000585903 ERFEQ4G0M1 354 aa14.02□□□□□ -0.17
MBD3-203ENST00000585903 C7orf43Q8WVR3 580 aa14.02□□□□□ -0.17
MBD3-203ENST00000585903 PLEKHF1Q96S99 279 aa14.02□□□□□ -0.17
MBD3-203ENST00000585903 NUP98P52948 1817 aa14.01□□□□□ -0.17
MBD3-203ENST00000585903 NBPF26B4DH59 902 aa14.01□□□□□ -0.17
MBD3-203ENST00000585903 NBPF10Q6P3W6 841 aaKnown RBP14.01□□□□□ -0.17
MBD3-203ENST00000585903 NBPF15Q8N660 670 aa14.01□□□□□ -0.17
MBD3-203ENST00000585903 BABAM1Q9NWV8 329 aa14.01□□□□□ -0.17
MBD3-203ENST00000585903 PRAMEF22A3QJZ6 481 aa14□□□□□ -0.17
MBD3-203ENST00000585903 NFE2L2Q16236 605 aa14□□□□□ -0.17
MBD3-203ENST00000585903 GRIPAP1Q4V328 841 aa14□□□□□ -0.17
MBD3-203ENST00000585903 CCDC93Q567U6 631 aa14□□□□□ -0.17
MBD3-203ENST00000585903 NYXQ9GZU5 481 aa14□□□□□ -0.17
MBD3-203ENST00000585903 NIP7Q9Y221 180 aaKnown RBP eCLIP14□□□□□ -0.17
MBD3-203ENST00000585903 POTECB2RU33 542 aa13.99□□□□□ -0.17
MBD3-203ENST00000585903 ALDH1B1P30837 517 aa13.99□□□□□ -0.17
MBD3-203ENST00000585903 DCTN1Q14203 1278 aa13.99□□□□□ -0.17
MBD3-203ENST00000585903 RTKN2Q8IZC4 609 aa13.99□□□□□ -0.17
MBD3-203ENST00000585903 L3MBTL3Q96JM7 780 aaPredicted RBP13.99□□□□□ -0.17
MBD3-203ENST00000585903 IQCA1LA6NCM1 817 aa13.98□□□□□ -0.17
MBD3-203ENST00000585903 EIF4A1P60842 406 aaKnown RBP13.98□□□□□ -0.17
MBD3-203ENST00000585903 CRY2Q49AN0 593 aa13.98□□□□□ -0.17
MBD3-203ENST00000585903 MAP3K15Q6ZN16 1313 aa13.97□□□□□ -0.17
MBD3-203ENST00000585903 MAPK8IP3Q9UPT6 1336 aa13.97□□□□□ -0.17
MBD3-203ENST00000585903 FKBP4Q02790 459 aaKnown RBP eCLIP13.97□□□□□ -0.17
MBD3-203ENST00000585903 RALBP1Q15311 655 aa13.97□□□□□ -0.17
MBD3-203ENST00000585903 CC2D2BQ6DHV5 1058 aa13.97□□□□□ -0.17
MBD3-203ENST00000585903 PIP4K2AP48426 406 aaPredicted RBP13.96□□□□□ -0.17
MBD3-203ENST00000585903 DDX10Q13206 875 aaKnown RBP13.96□□□□□ -0.17
MBD3-203ENST00000585903 CCDC24Q8N4L8 307 aa13.96□□□□□ -0.17
MBD3-203ENST00000585903 LMOD3Q0VAK6 560 aa13.95□□□□□ -0.18
MBD3-203ENST00000585903 HLFQ16534 295 aa13.95□□□□□ -0.18
MBD3-203ENST00000585903 KIF6Q6ZMV9 814 aa13.95□□□□□ -0.18
MBD3-203ENST00000585903 PSMD1Q99460 953 aa13.95□□□□□ -0.18
MBD3-203ENST00000585903 SNED1Q8TER0 1413 aa13.95□□□□□ -0.18
MBD3-203ENST00000585903 RNF123Q5XPI4 1314 aa13.94□□□□□ -0.18
MBD3-203ENST00000585903 GTF2E1P29083 439 aaPredicted RBP13.94□□□□□ -0.18
MBD3-203ENST00000585903 HOXA10P31260 410 aaPredicted RBP13.94□□□□□ -0.18
MBD3-203ENST00000585903 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
MBD3-203ENST00000585903 PRDM10Q9NQV6 1147 aa13.94□□□□□ -0.18
MBD3-203ENST00000585903 PCDH10Q9P2E7 1040 aa13.94□□□□□ -0.18
MBD3-203ENST00000585903 PARP10Q53GL7 1025 aa13.93□□□□□ -0.18
MBD3-203ENST00000585903 GIGYF2Q6Y7W6 1299 aaKnown RBP13.93□□□□□ -0.18
MBD3-203ENST00000585903 LDHDQ86WU2 507 aa13.93□□□□□ -0.18
MBD3-203ENST00000585903 CREBZFQ9NS37 354 aa13.93□□□□□ -0.18
MBD3-203ENST00000585903 MIS18AQ9NYP9 233 aa13.93□□□□□ -0.18
MBD3-203ENST00000585903 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
MBD3-203ENST00000585903 ADAMTSL1Q8N6G6 1762 aa13.92□□□□□ -0.18
MBD3-203ENST00000585903 FZD9O00144 591 aa13.92□□□□□ -0.18
MBD3-203ENST00000585903 FOXN1O15353 648 aa13.92□□□□□ -0.18
MBD3-203ENST00000585903 DDNO94850 711 aaPredicted RBP13.92□□□□□ -0.18
MBD3-203ENST00000585903 ZNF34Q8IZ26 560 aa13.92□□□□□ -0.18
MBD3-203ENST00000585903 CRAMP1Q96RY5 1269 aa13.92□□□□□ -0.18
MBD3-203ENST00000585903 VPS33BQ9H267 617 aa13.92□□□□□ -0.18
MBD3-203ENST00000585903 PPP1R42Q7Z4L9 355 aa13.91□□□□□ -0.18
MBD3-203ENST00000585903 PNMA8AQ86V59 439 aaPredicted RBP13.91□□□□□ -0.18
MBD3-203ENST00000585903 ANKRD36CQ5JPF3 1778 aa13.91□□□□□ -0.18
MBD3-203ENST00000585903 IARSP41252 1262 aaKnown RBP13.9□□□□□ -0.18
MBD3-203ENST00000585903 LRP10Q7Z4F1 713 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms