RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 MYL6BP14649 208 aa16.15■□□□□ 0.18
VMP1-202ENST00000585847 PDE3AQ14432 1141 aa16.15■□□□□ 0.18
VMP1-202ENST00000585847 COL24A1Q17RW2 1714 aa16.15■□□□□ 0.18
VMP1-202ENST00000585847 CCDC30Q5VVM6 783 aa16.15■□□□□ 0.18
VMP1-202ENST00000585847 G2E3Q7L622 706 aa16.15■□□□□ 0.18
VMP1-202ENST00000585847 SLC16A10Q8TF71 515 aa16.15■□□□□ 0.18
VMP1-202ENST00000585847 ADRA2BP18089 450 aa16.14■□□□□ 0.17
VMP1-202ENST00000585847 RARSP54136 660 aaKnown RBP16.14■□□□□ 0.17
VMP1-202ENST00000585847 TTLL7Q6ZT98 887 aa16.14■□□□□ 0.17
VMP1-202ENST00000585847 PHAXQ9H814 394 aaKnown RBP16.14■□□□□ 0.17
VMP1-202ENST00000585847 BCL2L12Q9HB09 334 aa16.14■□□□□ 0.17
VMP1-202ENST00000585847 DBF4Q9UBU7 674 aaPredicted RBP16.14■□□□□ 0.17
VMP1-202ENST00000585847 SRP68Q9UHB9 627 aaKnown RBP16.14■□□□□ 0.17
VMP1-202ENST00000585847 SCN7AQ01118 1682 aa16.14■□□□□ 0.17
VMP1-202ENST00000585847 IPO8O15397 1037 aaKnown RBP16.13■□□□□ 0.17
VMP1-202ENST00000585847 TRAPPC3LQ5T215 181 aa16.13■□□□□ 0.17
VMP1-202ENST00000585847 SSH1Q8WYL5 1049 aa16.13■□□□□ 0.17
VMP1-202ENST00000585847 NUP98P52948 1817 aa16.12■□□□□ 0.17
VMP1-202ENST00000585847 CAMTA2O94983 1202 aa16.12■□□□□ 0.17
VMP1-202ENST00000585847 C1QTNF8P60827 252 aa16.12■□□□□ 0.17
VMP1-202ENST00000585847 MRPL50Q8N5N7 158 aaKnown RBP16.12■□□□□ 0.17
VMP1-202ENST00000585847 XAGE3Q8WTP9 111 aa16.12■□□□□ 0.17
VMP1-202ENST00000585847 TBC1D2BQ9UPU7 963 aa16.12■□□□□ 0.17
VMP1-202ENST00000585847 USP42Q9H9J4 1324 aaKnown RBP16.12■□□□□ 0.17
VMP1-202ENST00000585847 FKBP8Q14318 412 aa16.11■□□□□ 0.17
VMP1-202ENST00000585847 COPS6Q7L5N1 327 aa16.11■□□□□ 0.17
VMP1-202ENST00000585847 FLAD1Q8NFF5 587 aa16.11■□□□□ 0.17
VMP1-202ENST00000585847 HYPKQ9NX55 129 aa16.11■□□□□ 0.17
VMP1-202ENST00000585847 NARFQ9UHQ1 456 aa16.11■□□□□ 0.17
VMP1-202ENST00000585847 ZNF330Q9Y3S2 320 aaPredicted RBP16.11■□□□□ 0.17
VMP1-202ENST00000585847 MSH5O43196 834 aa16.1■□□□□ 0.17
VMP1-202ENST00000585847 SLC4A2P04920 1241 aa16.1■□□□□ 0.17
VMP1-202ENST00000585847 GYS1P13807 737 aa16.1■□□□□ 0.17
VMP1-202ENST00000585847 DZIP3Q86Y13 1208 aaKnown RBP16.1■□□□□ 0.17
VMP1-202ENST00000585847 ARHGAP45Q92619 1136 aa16.1■□□□□ 0.17
VMP1-202ENST00000585847 BCL2L13Q9BXK5 485 aa16.1■□□□□ 0.17
VMP1-202ENST00000585847 ARFGEF2Q9Y6D5 1785 aa16.1■□□□□ 0.17
VMP1-202ENST00000585847 A0A087WZG4 1122 aa16.09■□□□□ 0.17
VMP1-202ENST00000585847 HLFQ16534 295 aa16.09■□□□□ 0.17
VMP1-202ENST00000585847 USPL1Q5W0Q7 1092 aa16.09■□□□□ 0.17
VMP1-202ENST00000585847 CHMP4BQ9H444 224 aaKnown RBP16.09■□□□□ 0.17
VMP1-202ENST00000585847 MAP3K15Q6ZN16 1313 aa16.09■□□□□ 0.17
VMP1-202ENST00000585847 RFC4P35249 363 aa16.08■□□□□ 0.16
VMP1-202ENST00000585847 AIMP1Q12904 312 aaKnown RBP16.08■□□□□ 0.16
VMP1-202ENST00000585847 STK31Q9BXU1 1019 aa16.08■□□□□ 0.16
VMP1-202ENST00000585847 SMC4Q9NTJ3 1288 aa16.08■□□□□ 0.16
VMP1-202ENST00000585847 BCAR3O75815 825 aa16.07■□□□□ 0.16
VMP1-202ENST00000585847 FLIIQ13045 1269 aa16.07■□□□□ 0.16
VMP1-202ENST00000585847 ZKSCAN2Q63HK3 967 aa16.07■□□□□ 0.16
VMP1-202ENST00000585847 PPP4R2Q9NY27 417 aa16.07■□□□□ 0.16
VMP1-202ENST00000585847 ADCY9O60503 1353 aa16.07■□□□□ 0.16
VMP1-202ENST00000585847 ANKRD36CQ5JPF3 1778 aa16.07■□□□□ 0.16
VMP1-202ENST00000585847 ERVV-1B6SEH8 477 aa16.06■□□□□ 0.16
VMP1-202ENST00000585847 ZBTB3Q9H5J0 574 aa16.06■□□□□ 0.16
VMP1-202ENST00000585847 MSL1Q68DK7 614 aa16.05■□□□□ 0.16
VMP1-202ENST00000585847 NLGN2Q8NFZ4 835 aa16.05■□□□□ 0.16
VMP1-202ENST00000585847 PLBD2Q8NHP8 589 aa16.05■□□□□ 0.16
VMP1-202ENST00000585847 PTPRCP08575 1304 aa16.04■□□□□ 0.16
VMP1-202ENST00000585847 AFDNP55196 1824 aaKnown RBP16.04■□□□□ 0.16
VMP1-202ENST00000585847 RGL2O15211 777 aa16.04■□□□□ 0.16
VMP1-202ENST00000585847 GRIN3BO60391 1043 aa16.04■□□□□ 0.16
VMP1-202ENST00000585847 ZPR1O75312 459 aa16.04■□□□□ 0.16
VMP1-202ENST00000585847 TM4SF1P30408 202 aa16.04■□□□□ 0.16
VMP1-202ENST00000585847 TBC1D9BQ66K14 1250 aa16.04■□□□□ 0.16
VMP1-202ENST00000585847 GIGYF2Q6Y7W6 1299 aaKnown RBP16.04■□□□□ 0.16
VMP1-202ENST00000585847 ANKRD13DQ6ZTN6 518 aa16.04■□□□□ 0.16
VMP1-202ENST00000585847 API5Q9BZZ5 524 aaKnown RBP16.04■□□□□ 0.16
VMP1-202ENST00000585847 NRXN2Q9P2S2 1712 aa16.03■□□□□ 0.16
VMP1-202ENST00000585847 PI4KAP2A4QPH2 592 aa16.03■□□□□ 0.16
VMP1-202ENST00000585847 DDR1Q08345 913 aa16.03■□□□□ 0.16
VMP1-202ENST00000585847 NFIXQ14938 502 aa16.03■□□□□ 0.16
VMP1-202ENST00000585847 CLEC4GQ6UXB4 293 aa16.03■□□□□ 0.16
VMP1-202ENST00000585847 KSR2Q6VAB6 950 aa16.03■□□□□ 0.16
VMP1-202ENST00000585847 KIF6Q6ZMV9 814 aa16.03■□□□□ 0.16
VMP1-202ENST00000585847 PI4KAP1Q8N8J0 262 aa16.03■□□□□ 0.16
VMP1-202ENST00000585847 TNNQ9UQP3 1299 aa16.03■□□□□ 0.16
VMP1-202ENST00000585847 ATP10DQ9P241 1426 aa16.02■□□□□ 0.16
VMP1-202ENST00000585847 GOLGB1Q14789 3259 aaKnown RBP16.02■□□□□ 0.16
VMP1-202ENST00000585847 F6X3S4 739 aa16.02■□□□□ 0.16
VMP1-202ENST00000585847 ATF7IPQ6VMQ6 1270 aa16.02■□□□□ 0.16
VMP1-202ENST00000585847 FTSJ3Q8IY81 847 aaKnown RBP16.02■□□□□ 0.16
VMP1-202ENST00000585847 ZNF34Q8IZ26 560 aa16.02■□□□□ 0.16
VMP1-202ENST00000585847 NOB1Q9ULX3 412 aaKnown RBP16.02■□□□□ 0.16
VMP1-202ENST00000585847 UBN2Q6ZU65 1347 aa16.01■□□□□ 0.15
VMP1-202ENST00000585847 TCIRG1Q13488 830 aa16.01■□□□□ 0.15
VMP1-202ENST00000585847 NPM2Q86SE8 214 aaKnown RBP16.01■□□□□ 0.15
VMP1-202ENST00000585847 NLGN1Q8N2Q7 840 aa16.01■□□□□ 0.15
VMP1-202ENST00000585847 ISCA1Q9BUE6 129 aa16.01■□□□□ 0.15
VMP1-202ENST00000585847 METTL22Q9BUU2 404 aaPredicted RBP16.01■□□□□ 0.15
VMP1-202ENST00000585847 MAP3K2Q9Y2U5 619 aa16.01■□□□□ 0.15
VMP1-202ENST00000585847 POLRMTO00411 1230 aaKnown RBP16■□□□□ 0.15
VMP1-202ENST00000585847 FKBP5Q13451 457 aaPredicted RBP16■□□□□ 0.15
VMP1-202ENST00000585847 RIC3Q7Z5B4 369 aa16■□□□□ 0.15
VMP1-202ENST00000585847 N4BP2Q86UW6 1770 aaPredicted RBP16■□□□□ 0.15
VMP1-202ENST00000585847 IGKV5-2P06315 115 aa15.99■□□□□ 0.15
VMP1-202ENST00000585847 MMP10P09238 476 aa15.99■□□□□ 0.15
VMP1-202ENST00000585847 BICDL1Q6ZP65 573 aa15.99■□□□□ 0.15
VMP1-202ENST00000585847 DZIP1LQ8IYY4 767 aaKnown RBP15.99■□□□□ 0.15
VMP1-202ENST00000585847 DNAAF4Q8WXU2 420 aa15.99■□□□□ 0.15
VMP1-202ENST00000585847 DDX58O95786 925 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms