RNA–Protein interactions for RNA: ENST00000585600.5

LAMA3-204, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 1,815 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-204ENST00000585600 DNAAF4Q8WXU2 420 aa28.43■■■□□ 2.14
LAMA3-204ENST00000585600 MYH14Q7Z406 1995 aaKnown RBP28.43■■■□□ 2.14
LAMA3-204ENST00000585600 MVPQ14764 893 aaKnown RBP28.43■■■□□ 2.14
LAMA3-204ENST00000585600 INTS3Q68E01 1043 aaKnown RBP28.43■■■□□ 2.14
LAMA3-204ENST00000585600 SMIM5Q71RC9 77 aa28.43■■■□□ 2.14
LAMA3-204ENST00000585600 EZH2Q15910 746 aaKnown RBP28.42■■■□□ 2.14
LAMA3-204ENST00000585600 RIC3Q7Z5B4 369 aa28.42■■■□□ 2.14
LAMA3-204ENST00000585600 AMIGO3Q86WK7 504 aa28.42■■■□□ 2.14
LAMA3-204ENST00000585600 PLBD2Q8NHP8 589 aa28.42■■■□□ 2.14
LAMA3-204ENST00000585600 RPS6KA4O75676 772 aa28.41■■■□□ 2.14
LAMA3-204ENST00000585600 PDE4AP27815 886 aa28.41■■■□□ 2.14
LAMA3-204ENST00000585600 SF3B2Q13435 895 aaKnown RBP28.41■■■□□ 2.14
LAMA3-204ENST00000585600 DEFB132Q7Z7B7 95 aa28.41■■■□□ 2.14
LAMA3-204ENST00000585600 ITPRIPQ8IWB1 547 aa28.41■■■□□ 2.14
LAMA3-204ENST00000585600 GNPATO15228 680 aa28.4■■■□□ 2.14
LAMA3-204ENST00000585600 BACH2Q9BYV9 841 aa28.4■■■□□ 2.14
LAMA3-204ENST00000585600 BEND3Q5T5X7 828 aa28.39■■■□□ 2.14
LAMA3-204ENST00000585600 ZBTB3Q9H5J0 574 aa28.39■■■□□ 2.14
LAMA3-204ENST00000585600 TBC1D2BQ9UPU7 963 aa28.39■■■□□ 2.14
LAMA3-204ENST00000585600 AAMPQ13685 434 aa28.39■■■□□ 2.13
LAMA3-204ENST00000585600 ARXQ96QS3 562 aa28.39■■■□□ 2.13
LAMA3-204ENST00000585600 TAF1LQ8IZX4 1826 aa28.38■■■□□ 2.13
LAMA3-204ENST00000585600 C4BP0C0L5 1744 aa28.38■■■□□ 2.13
LAMA3-204ENST00000585600 ANP32AP39687 249 aaKnown RBP28.38■■■□□ 2.13
LAMA3-204ENST00000585600 DZIP3Q86Y13 1208 aaKnown RBP28.38■■■□□ 2.13
LAMA3-204ENST00000585600 COL15A1P39059 1388 aa28.37■■■□□ 2.13
LAMA3-204ENST00000585600 BAG6P46379 1132 aa28.37■■■□□ 2.13
LAMA3-204ENST00000585600 CCT4P50991 539 aaKnown RBP28.37■■■□□ 2.13
LAMA3-204ENST00000585600 NPM2Q86SE8 214 aaKnown RBP28.37■■■□□ 2.13
LAMA3-204ENST00000585600 AK7Q96M32 723 aa28.37■■■□□ 2.13
LAMA3-204ENST00000585600 METTL22Q9BUU2 404 aaPredicted RBP28.37■■■□□ 2.13
LAMA3-204ENST00000585600 RTCBQ9Y3I0 505 aaKnown RBP28.37■■■□□ 2.13
LAMA3-204ENST00000585600 MAP3K15Q6ZN16 1313 aa28.37■■■□□ 2.13
LAMA3-204ENST00000585600 KIF6Q6ZMV9 814 aa28.36■■■□□ 2.13
LAMA3-204ENST00000585600 CCDC125Q86Z20 511 aa28.36■■■□□ 2.13
LAMA3-204ENST00000585600 PXDNLA1KZ92 1463 aa28.35■■■□□ 2.13
LAMA3-204ENST00000585600 HLFQ16534 295 aa28.35■■■□□ 2.13
LAMA3-204ENST00000585600 ZBTB7BO15156 539 aaPredicted RBP28.34■■■□□ 2.13
LAMA3-204ENST00000585600 ERICH6Q7L0X2 663 aa28.34■■■□□ 2.13
LAMA3-204ENST00000585600 MYD88Q99836 296 aa28.34■■■□□ 2.13
LAMA3-204ENST00000585600 DDX19BQ9UMR2 479 aa28.34■■■□□ 2.13
LAMA3-204ENST00000585600 ATP10DQ9P241 1426 aa28.34■■■□□ 2.13
LAMA3-204ENST00000585600 RGPD3A6NKT7 1758 aaPredicted RBP28.34■■■□□ 2.13
LAMA3-204ENST00000585600 RGPD4Q7Z3J3 1758 aa28.34■■■□□ 2.13
LAMA3-204ENST00000585600 IGKV5-2P06315 115 aa28.34■■■□□ 2.13
LAMA3-204ENST00000585600 ZNF827Q17R98 1081 aa28.34■■■□□ 2.13
LAMA3-204ENST00000585600 AKT1S1Q96B36 256 aa28.34■■■□□ 2.13
LAMA3-204ENST00000585600 SRCIN1Q9C0H9 1055 aa28.34■■■□□ 2.13
LAMA3-204ENST00000585600 ERVV-1B6SEH8 477 aa28.33■■■□□ 2.13
LAMA3-204ENST00000585600 CAMTA2O94983 1202 aa28.33■■■□□ 2.13
LAMA3-204ENST00000585600 HMGB2P26583 209 aaKnown RBP28.33■■■□□ 2.13
LAMA3-204ENST00000585600 CWF19L2Q2TBE0 894 aaKnown RBP28.33■■■□□ 2.13
LAMA3-204ENST00000585600 LINS1Q8NG48 757 aa28.32■■■□□ 2.12
LAMA3-204ENST00000585600 ARHGEF1Q92888 912 aaKnown RBP28.32■■■□□ 2.12
LAMA3-204ENST00000585600 A0A087WZG4 1122 aa28.32■■■□□ 2.12
LAMA3-204ENST00000585600 GIGYF2Q6Y7W6 1299 aaKnown RBP28.32■■■□□ 2.12
LAMA3-204ENST00000585600 IPO9Q96P70 1041 aaKnown RBP28.32■■■□□ 2.12
LAMA3-204ENST00000585600 PHF14O94880 888 aa28.31■■■□□ 2.12
LAMA3-204ENST00000585600 UPF1Q92900 1129 aaKnown RBP eCLIP28.3■■■□□ 2.12
LAMA3-204ENST00000585600 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.29■■■□□ 2.12
LAMA3-204ENST00000585600 ATP5J2-PTCD1G3V325 749 aa28.29■■■□□ 2.12
LAMA3-204ENST00000585600 NEXNQ0ZGT2 675 aa28.29■■■□□ 2.12
LAMA3-204ENST00000585600 TCIRG1Q13488 830 aa28.29■■■□□ 2.12
LAMA3-204ENST00000585600 TRAPPC3LQ5T215 181 aa28.29■■■□□ 2.12
LAMA3-204ENST00000585600 NEURL1BA8MQ27 555 aa28.29■■■□□ 2.12
LAMA3-204ENST00000585600 ALDH1L1O75891 902 aa28.29■■■□□ 2.12
LAMA3-204ENST00000585600 MEIS3Q99687 375 aa28.29■■■□□ 2.12
LAMA3-204ENST00000585600 ZBTB40Q9NUA8 1239 aa28.29■■■□□ 2.12
LAMA3-204ENST00000585600 ILDR2Q71H61 639 aa28.28■■■□□ 2.12
LAMA3-204ENST00000585600 USP44Q9H0E7 712 aa28.28■■■□□ 2.12
LAMA3-204ENST00000585600 ISCA1Q9BUE6 129 aa28.27■■■□□ 2.12
LAMA3-204ENST00000585600 NARFQ9UHQ1 456 aa28.27■■■□□ 2.12
LAMA3-204ENST00000585600 ADRA2BP18089 450 aa28.27■■■□□ 2.12
LAMA3-204ENST00000585600 SSFA2P28290 1259 aa28.27■■■□□ 2.12
LAMA3-204ENST00000585600 NUP188Q5SRE5 1749 aa28.27■■■□□ 2.12
LAMA3-204ENST00000585600 ANO8Q9HCE9 1232 aaPredicted RBP28.27■■■□□ 2.12
LAMA3-204ENST00000585600 SRP68Q9UHB9 627 aaKnown RBP28.27■■■□□ 2.12
LAMA3-204ENST00000585600 ARFGEF2Q9Y6D5 1785 aa28.26■■■□□ 2.12
LAMA3-204ENST00000585600 BCL2L12Q9HB09 334 aa28.26■■■□□ 2.11
LAMA3-204ENST00000585600 NOP58Q9Y2X3 529 aaKnown RBP28.26■■■□□ 2.11
LAMA3-204ENST00000585600 TFCP2L1Q9NZI6 479 aa28.25■■■□□ 2.11
LAMA3-204ENST00000585600 USPL1Q5W0Q7 1092 aa28.25■■■□□ 2.11
LAMA3-204ENST00000585600 RFC4P35249 363 aa28.24■■■□□ 2.11
LAMA3-204ENST00000585600 GCKRQ14397 625 aa28.24■■■□□ 2.11
LAMA3-204ENST00000585600 TRIM28Q13263 835 aaKnown RBP28.23■■■□□ 2.11
LAMA3-204ENST00000585600 HSP90AB3PQ58FF7 597 aa28.23■■■□□ 2.11
LAMA3-204ENST00000585600 USP42Q9H9J4 1324 aaKnown RBP28.23■■■□□ 2.11
LAMA3-204ENST00000585600 NBPF7P0C2Y1 421 aaPredicted RBP28.22■■■□□ 2.11
LAMA3-204ENST00000585600 CLEC4GQ6UXB4 293 aa28.22■■■□□ 2.11
LAMA3-204ENST00000585600 ZNF34Q8IZ26 560 aa28.22■■■□□ 2.11
LAMA3-204ENST00000585600 UBR3Q6ZT12 1888 aa28.22■■■□□ 2.11
LAMA3-204ENST00000585600 IBTKQ9P2D0 1353 aaPredicted RBP28.22■■■□□ 2.11
LAMA3-204ENST00000585600 ZPR1O75312 459 aa28.22■■■□□ 2.11
LAMA3-204ENST00000585600 GPTP24298 496 aa28.22■■■□□ 2.11
LAMA3-204ENST00000585600 SLC15A2Q16348 729 aa28.21■■■□□ 2.11
LAMA3-204ENST00000585600 CCDC191Q8NCU4 936 aa28.21■■■□□ 2.11
LAMA3-204ENST00000585600 CHMP4BQ9H444 224 aaKnown RBP28.21■■■□□ 2.11
LAMA3-204ENST00000585600 RGL2O15211 777 aa28.2■■■□□ 2.11
LAMA3-204ENST00000585600 C1orf115Q9H7X2 142 aa28.2■■■□□ 2.11
LAMA3-204ENST00000585600 N4BP2Q86UW6 1770 aaPredicted RBP28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms