RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 UBTFL1P0CB47 393 aaPredicted RBP17.53■□□□□ 0.4
UBBP4-202ENST00000584755 NEXNQ0ZGT2 675 aa17.53■□□□□ 0.4
UBBP4-202ENST00000584755 GCC1Q96CN9 775 aa17.53■□□□□ 0.4
UBBP4-202ENST00000584755 NEURL1BA8MQ27 555 aa17.52■□□□□ 0.4
UBBP4-202ENST00000584755 ATP6V1AP38606 617 aa17.52■□□□□ 0.4
UBBP4-202ENST00000584755 ITPK1Q13572 414 aa17.52■□□□□ 0.4
UBBP4-202ENST00000584755 CWF19L2Q2TBE0 894 aaKnown RBP17.52■□□□□ 0.4
UBBP4-202ENST00000584755 PTF1AQ7RTS3 328 aa17.52■□□□□ 0.4
UBBP4-202ENST00000584755 NBPF7P0C2Y1 421 aaPredicted RBP17.51■□□□□ 0.39
UBBP4-202ENST00000584755 IL6STP40189 918 aaPredicted RBP17.51■□□□□ 0.39
UBBP4-202ENST00000584755 FAM182BQ5T319 152 aa17.51■□□□□ 0.39
UBBP4-202ENST00000584755 DCTPP1Q9H773 170 aa17.51■□□□□ 0.39
UBBP4-202ENST00000584755 PDZRN3Q9UPQ7 1066 aa17.51■□□□□ 0.39
UBBP4-202ENST00000584755 ZBTB1Q9Y2K1 713 aa17.51■□□□□ 0.39
UBBP4-202ENST00000584755 LRRFIP2Q9Y608 721 aaKnown RBP17.51■□□□□ 0.39
UBBP4-202ENST00000584755 LY75O60449 1722 aa17.51■□□□□ 0.39
UBBP4-202ENST00000584755 GRM8O00222 908 aa17.5■□□□□ 0.39
UBBP4-202ENST00000584755 ATP8B2P98198 1209 aa17.5■□□□□ 0.39
UBBP4-202ENST00000584755 INTS5Q6P9B9 1019 aaKnown RBP17.5■□□□□ 0.39
UBBP4-202ENST00000584755 MYD88Q99836 296 aa17.5■□□□□ 0.39
UBBP4-202ENST00000584755 HMMRO75330 724 aa17.5■□□□□ 0.39
UBBP4-202ENST00000584755 GCKRQ14397 625 aa17.5■□□□□ 0.39
UBBP4-202ENST00000584755 KRT27Q7Z3Y8 459 aa17.5■□□□□ 0.39
UBBP4-202ENST00000584755 SKAP1Q86WV1 359 aa17.5■□□□□ 0.39
UBBP4-202ENST00000584755 BCL11BQ9C0K0 894 aaPredicted RBP17.5■□□□□ 0.39
UBBP4-202ENST00000584755 CCDC87Q9NVE4 849 aa17.5■□□□□ 0.39
UBBP4-202ENST00000584755 HDAC5Q9UQL6 1122 aa17.5■□□□□ 0.39
UBBP4-202ENST00000584755 COL15A1P39059 1388 aa17.49■□□□□ 0.39
UBBP4-202ENST00000584755 AFDNP55196 1824 aaKnown RBP17.49■□□□□ 0.39
UBBP4-202ENST00000584755 CRKLP46109 303 aaKnown RBP17.49■□□□□ 0.39
UBBP4-202ENST00000584755 EIF5P55010 431 aaKnown RBP17.49■□□□□ 0.39
UBBP4-202ENST00000584755 NUCB1Q02818 461 aa17.49■□□□□ 0.39
UBBP4-202ENST00000584755 FAM196AQ6ZSG2 479 aa17.49■□□□□ 0.39
UBBP4-202ENST00000584755 C9orf78Q9NZ63 289 aaPredicted RBP17.49■□□□□ 0.39
UBBP4-202ENST00000584755 MYH14Q7Z406 1995 aaKnown RBP17.48■□□□□ 0.39
UBBP4-202ENST00000584755 MTX1Q13505 466 aa17.48■□□□□ 0.39
UBBP4-202ENST00000584755 MAP3K15Q6ZN16 1313 aa17.48■□□□□ 0.39
UBBP4-202ENST00000584755 TRIM28Q13263 835 aaKnown RBP17.47■□□□□ 0.39
UBBP4-202ENST00000584755 KIF6Q6ZMV9 814 aa17.47■□□□□ 0.39
UBBP4-202ENST00000584755 ISCA1Q9BUE6 129 aa17.47■□□□□ 0.39
UBBP4-202ENST00000584755 ERVV-1B6SEH8 477 aa17.46■□□□□ 0.39
UBBP4-202ENST00000584755 POLA2Q14181 598 aa17.46■□□□□ 0.39
UBBP4-202ENST00000584755 SSH3Q8TE77 659 aa17.46■□□□□ 0.39
UBBP4-202ENST00000584755 ZBTB3Q9H5J0 574 aa17.46■□□□□ 0.39
UBBP4-202ENST00000584755 RGS17Q9UGC6 210 aaPredicted RBP17.46■□□□□ 0.39
UBBP4-202ENST00000584755 CNTNAP4Q9C0A0 1308 aa17.46■□□□□ 0.39
UBBP4-202ENST00000584755 PNMA6EA0A0J9YXQ4 647 aa17.45■□□□□ 0.38
UBBP4-202ENST00000584755 TCIRG1Q13488 830 aa17.45■□□□□ 0.38
UBBP4-202ENST00000584755 CCDC191Q8NCU4 936 aa17.45■□□□□ 0.38
UBBP4-202ENST00000584755 LINC00116Q8NCU8 138 aa17.45■□□□□ 0.38
UBBP4-202ENST00000584755 KAZALD1Q96I82 304 aa17.45■□□□□ 0.38
UBBP4-202ENST00000584755 ATP5J2-PTCD1G3V325 749 aa17.44■□□□□ 0.38
UBBP4-202ENST00000584755 RXRBP28702 533 aa17.44■□□□□ 0.38
UBBP4-202ENST00000584755 CASP7P55210 303 aa17.44■□□□□ 0.38
UBBP4-202ENST00000584755 RC3H1Q5TC82 1133 aaKnown RBP17.44■□□□□ 0.38
UBBP4-202ENST00000584755 GIGYF2Q6Y7W6 1299 aaKnown RBP17.44■□□□□ 0.38
UBBP4-202ENST00000584755 CHD1LQ86WJ1 897 aa17.44■□□□□ 0.38
UBBP4-202ENST00000584755 ANKRD36CQ5JPF3 1778 aa17.44■□□□□ 0.38
UBBP4-202ENST00000584755 H7C1W4 665 aa17.44■□□□□ 0.38
UBBP4-202ENST00000584755 PPP1R42Q7Z4L9 355 aa17.44■□□□□ 0.38
UBBP4-202ENST00000584755 SUCLG2Q96I99 432 aa17.44■□□□□ 0.38
UBBP4-202ENST00000584755 CWC25Q9NXE8 425 aaPredicted RBP17.44■□□□□ 0.38
UBBP4-202ENST00000584755 TAF1LQ8IZX4 1826 aa17.43■□□□□ 0.38
UBBP4-202ENST00000584755 PDE4AP27815 886 aa17.43■□□□□ 0.38
UBBP4-202ENST00000584755 RGS3P49796 1198 aa17.43■□□□□ 0.38
UBBP4-202ENST00000584755 HSP90AB3PQ58FF7 597 aa17.43■□□□□ 0.38
UBBP4-202ENST00000584755 DZIP3Q86Y13 1208 aaKnown RBP17.43■□□□□ 0.38
UBBP4-202ENST00000584755 ZNF330Q9Y3S2 320 aaPredicted RBP17.43■□□□□ 0.38
UBBP4-202ENST00000584755 ANKRD45Q5TZF3 282 aa17.42■□□□□ 0.38
UBBP4-202ENST00000584755 NUP98P52948 1817 aa17.42■□□□□ 0.38
UBBP4-202ENST00000584755 A0A087WZG4 1122 aa17.41■□□□□ 0.38
UBBP4-202ENST00000584755 HLFQ16534 295 aa17.41■□□□□ 0.38
UBBP4-202ENST00000584755 TSHZ2Q9NRE2 1034 aa17.41■□□□□ 0.38
UBBP4-202ENST00000584755 CCNL1Q9UK58 526 aaPredicted RBP17.41■□□□□ 0.38
UBBP4-202ENST00000584755 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
UBBP4-202ENST00000584755 RGL2O15211 777 aa17.4■□□□□ 0.38
UBBP4-202ENST00000584755 SRGAP3O43295 1099 aa17.4■□□□□ 0.38
UBBP4-202ENST00000584755 RABL6Q3YEC7 729 aaPredicted RBP17.4■□□□□ 0.38
UBBP4-202ENST00000584755 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
UBBP4-202ENST00000584755 LNPKQ9C0E8 428 aa17.4■□□□□ 0.38
UBBP4-202ENST00000584755 BICC1Q9H694 974 aaKnown RBP17.4■□□□□ 0.38
UBBP4-202ENST00000584755 POTEAQ6S8J7 498 aa17.39■□□□□ 0.37
UBBP4-202ENST00000584755 UBE3BQ7Z3V4 1068 aa17.39■□□□□ 0.37
UBBP4-202ENST00000584755 TBC1D2BQ9UPU7 963 aa17.39■□□□□ 0.37
UBBP4-202ENST00000584755 NOP58Q9Y2X3 529 aaKnown RBP17.39■□□□□ 0.37
UBBP4-202ENST00000584755 C4BP0C0L5 1744 aa17.38■□□□□ 0.37
UBBP4-202ENST00000584755 CAMTA2O94983 1202 aa17.38■□□□□ 0.37
UBBP4-202ENST00000584755 EPHA10Q5JZY3 1008 aa17.38■□□□□ 0.37
UBBP4-202ENST00000584755 ZNF34Q8IZ26 560 aa17.38■□□□□ 0.37
UBBP4-202ENST00000584755 RPS6KA4O75676 772 aa17.37■□□□□ 0.37
UBBP4-202ENST00000584755 KCNQ4P56696 695 aa17.37■□□□□ 0.37
UBBP4-202ENST00000584755 NLRP10Q86W26 655 aa17.37■□□□□ 0.37
UBBP4-202ENST00000584755 RAB11FIP3O75154 756 aa17.37■□□□□ 0.37
UBBP4-202ENST00000584755 TRIM37O94972 964 aa17.37■□□□□ 0.37
UBBP4-202ENST00000584755 PCCAP05165 728 aaPredicted RBP17.37■□□□□ 0.37
UBBP4-202ENST00000584755 SLC27A3Q5K4L6 730 aa17.37■□□□□ 0.37
UBBP4-202ENST00000584755 EXOC6BQ9Y2D4 811 aa17.37■□□□□ 0.37
UBBP4-202ENST00000584755 SCN7AQ01118 1682 aa17.36■□□□□ 0.37
UBBP4-202ENST00000584755 ZBTB38Q8NAP3 1195 aaPredicted RBP17.36■□□□□ 0.37
UBBP4-202ENST00000584755 ARXQ96QS3 562 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms