RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 AMOTQ4VCS5 1084 aa15.36■□□□□ 0.05
ITGB4-212ENST00000584558 PLEKHO1Q53GL0 409 aaPredicted RBP15.36■□□□□ 0.05
ITGB4-212ENST00000584558 CWC22Q9HCG8 908 aaKnown RBP15.36■□□□□ 0.05
ITGB4-212ENST00000584558 ZC3H6P61129 1189 aaKnown RBP15.35■□□□□ 0.05
ITGB4-212ENST00000584558 G2E3Q7L622 706 aa15.35■□□□□ 0.05
ITGB4-212ENST00000584558 FKBP5Q13451 457 aaPredicted RBP15.35■□□□□ 0.05
ITGB4-212ENST00000584558 CPDO75976 1380 aa15.34■□□□□ 0.05
ITGB4-212ENST00000584558 ATP10DQ9P241 1426 aa15.34■□□□□ 0.05
ITGB4-212ENST00000584558 CHAF1AQ13111 956 aaPredicted RBP15.34■□□□□ 0.05
ITGB4-212ENST00000584558 ZNF530Q6P9A1 599 aaPredicted RBP15.34■□□□□ 0.05
ITGB4-212ENST00000584558 RIOK3O14730 519 aaKnown RBP15.34■□□□□ 0.05
ITGB4-212ENST00000584558 FOXD4L6Q3SYB3 417 aaPredicted RBP15.34■□□□□ 0.05
ITGB4-212ENST00000584558 FOXD4L3Q6VB84 417 aaPredicted RBP15.34■□□□□ 0.05
ITGB4-212ENST00000584558 ABCA3Q99758 1704 aa15.33■□□□□ 0.04
ITGB4-212ENST00000584558 ST18O60284 1047 aa15.33■□□□□ 0.04
ITGB4-212ENST00000584558 PLCB2Q00722 1185 aa15.33■□□□□ 0.04
ITGB4-212ENST00000584558 TPRNQ4KMQ1 711 aa15.33■□□□□ 0.04
ITGB4-212ENST00000584558 PLEKHG2Q9H7P9 1386 aa15.32■□□□□ 0.04
ITGB4-212ENST00000584558 RNMTO43148 476 aaKnown RBP15.32■□□□□ 0.04
ITGB4-212ENST00000584558 ADCY5O95622 1261 aa15.32■□□□□ 0.04
ITGB4-212ENST00000584558 CCDC30Q5VVM6 783 aa15.32■□□□□ 0.04
ITGB4-212ENST00000584558 SOS2Q07890 1332 aaPredicted RBP15.32■□□□□ 0.04
ITGB4-212ENST00000584558 PKD1L3Q7Z443 1732 aa15.31■□□□□ 0.04
ITGB4-212ENST00000584558 EIF4A1P60842 406 aaKnown RBP15.31■□□□□ 0.04
ITGB4-212ENST00000584558 SYAP1Q96A49 352 aaPredicted RBP15.31■□□□□ 0.04
ITGB4-212ENST00000584558 GCC1Q96CN9 775 aa15.31■□□□□ 0.04
ITGB4-212ENST00000584558 NHSL1Q5SYE7 1610 aa15.31■□□□□ 0.04
ITGB4-212ENST00000584558 SCN11AQ9UI33 1791 aa15.31■□□□□ 0.04
ITGB4-212ENST00000584558 DIAPH3Q9NSV4 1193 aa15.31■□□□□ 0.04
ITGB4-212ENST00000584558 KCNJ4P48050 445 aa15.3■□□□□ 0.04
ITGB4-212ENST00000584558 MEGF6O75095 1541 aa15.3■□□□□ 0.04
ITGB4-212ENST00000584558 GSPT1P15170 499 aaKnown RBP15.3■□□□□ 0.04
ITGB4-212ENST00000584558 MPRIPQ6WCQ1 1025 aa15.3■□□□□ 0.04
ITGB4-212ENST00000584558 ANKRD7Q92527 254 aa15.3■□□□□ 0.04
ITGB4-212ENST00000584558 SPTLC3Q9NUV7 552 aa15.3■□□□□ 0.04
ITGB4-212ENST00000584558 HEG1Q9ULI3 1381 aa15.29■□□□□ 0.04
ITGB4-212ENST00000584558 PXDNLA1KZ92 1463 aa15.29■□□□□ 0.04
ITGB4-212ENST00000584558 TOM1O60784 492 aa15.29■□□□□ 0.04
ITGB4-212ENST00000584558 STK31Q9BXU1 1019 aa15.29■□□□□ 0.04
ITGB4-212ENST00000584558 USP26Q9BXU7 913 aa15.29■□□□□ 0.04
ITGB4-212ENST00000584558 GDPD2Q9HCC8 539 aa15.29■□□□□ 0.04
ITGB4-212ENST00000584558 KCNQ3O43525 872 aa15.29■□□□□ 0.04
ITGB4-212ENST00000584558 HOXB7P09629 217 aa15.29■□□□□ 0.04
ITGB4-212ENST00000584558 FLIIQ13045 1269 aa15.29■□□□□ 0.04
ITGB4-212ENST00000584558 CHRNA2Q15822 529 aa15.29■□□□□ 0.04
ITGB4-212ENST00000584558 FEZ1Q99689 392 aa15.29■□□□□ 0.04
ITGB4-212ENST00000584558 C1orf141Q5JVX7 400 aa15.28■□□□□ 0.04
ITGB4-212ENST00000584558 OGFRQ9NZT2 677 aa15.28■□□□□ 0.04
ITGB4-212ENST00000584558 F6X3S4 739 aa15.28■□□□□ 0.04
ITGB4-212ENST00000584558 PHF14O94880 888 aa15.28■□□□□ 0.04
ITGB4-212ENST00000584558 IRX5P78411 483 aaPredicted RBP15.28■□□□□ 0.04
ITGB4-212ENST00000584558 ANKRD44Q8N8A2 993 aa15.28■□□□□ 0.04
ITGB4-212ENST00000584558 MEIS3Q99687 375 aa15.28■□□□□ 0.04
ITGB4-212ENST00000584558 CCT4P50991 539 aaKnown RBP15.27■□□□□ 0.03
ITGB4-212ENST00000584558 KDM6AO15550 1401 aaPredicted RBP15.27■□□□□ 0.03
ITGB4-212ENST00000584558 NUTM2BA6NNL0 878 aaPredicted RBP15.26■□□□□ 0.03
ITGB4-212ENST00000584558 BTBD11A6QL63 1104 aa15.26■□□□□ 0.03
ITGB4-212ENST00000584558 NUTM2EB1AL46 878 aaPredicted RBP15.26■□□□□ 0.03
ITGB4-212ENST00000584558 HCLS1P14317 486 aaPredicted RBP15.26■□□□□ 0.03
ITGB4-212ENST00000584558 TEFQ10587 303 aa15.26■□□□□ 0.03
ITGB4-212ENST00000584558 CEP85Q6P2H3 762 aa15.26■□□□□ 0.03
ITGB4-212ENST00000584558 NUTM2AQ8IVF1 878 aaPredicted RBP15.26■□□□□ 0.03
ITGB4-212ENST00000584558 GADD45BO75293 160 aaPredicted RBP15.26■□□□□ 0.03
ITGB4-212ENST00000584558 FAM184AQ8NB25 1140 aa15.26■□□□□ 0.03
ITGB4-212ENST00000584558 DCTPP1Q9H773 170 aa15.26■□□□□ 0.03
ITGB4-212ENST00000584558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.26■□□□□ 0.03
ITGB4-212ENST00000584558 ROBO1Q9Y6N7 1651 aa15.26■□□□□ 0.03
ITGB4-212ENST00000584558 MRC1P22897 1456 aa15.26■□□□□ 0.03
ITGB4-212ENST00000584558 HDGFL1Q5TGJ6 251 aa15.26■□□□□ 0.03
ITGB4-212ENST00000584558 RPAP2Q8IXW5 612 aaPredicted RBP15.26■□□□□ 0.03
ITGB4-212ENST00000584558 NECTIN2Q92692 538 aa15.26■□□□□ 0.03
ITGB4-212ENST00000584558 NLRP2Q9NX02 1062 aa15.26■□□□□ 0.03
ITGB4-212ENST00000584558 PYCARDQ9ULZ3 195 aa15.26■□□□□ 0.03
ITGB4-212ENST00000584558 TAF7LQ5H9L4 462 aa15.25■□□□□ 0.03
ITGB4-212ENST00000584558 NOL8Q76FK4 1167 aaKnown RBP15.25■□□□□ 0.03
ITGB4-212ENST00000584558 HSPA1LP34931 641 aa15.25■□□□□ 0.03
ITGB4-212ENST00000584558 UVSSAQ2YD98 709 aa15.25■□□□□ 0.03
ITGB4-212ENST00000584558 GABPB1Q06547 395 aaPredicted RBP15.24■□□□□ 0.03
ITGB4-212ENST00000584558 PARP4Q9UKK3 1724 aaKnown RBP15.24■□□□□ 0.03
ITGB4-212ENST00000584558 NCBP1Q09161 790 aaKnown RBP15.24■□□□□ 0.03
ITGB4-212ENST00000584558 SPC24Q8NBT2 197 aa15.24■□□□□ 0.03
ITGB4-212ENST00000584558 KIAA1524Q8TCG1 905 aa15.24■□□□□ 0.03
ITGB4-212ENST00000584558 RAPGEF4Q8WZA2 1011 aa15.24■□□□□ 0.03
ITGB4-212ENST00000584558 CTIFO43310 598 aaKnown RBP15.23■□□□□ 0.03
ITGB4-212ENST00000584558 ADAMTS2O95450 1211 aa15.23■□□□□ 0.03
ITGB4-212ENST00000584558 PHKG2P15735 406 aa15.23■□□□□ 0.03
ITGB4-212ENST00000584558 PLEKHM2Q8IWE5 1019 aa15.23■□□□□ 0.03
ITGB4-212ENST00000584558 SMARCA5O60264 1052 aaPredicted RBP15.23■□□□□ 0.03
ITGB4-212ENST00000584558 TATP17735 454 aaPredicted RBP15.23■□□□□ 0.03
ITGB4-212ENST00000584558 SLC4A10Q6U841 1118 aa15.23■□□□□ 0.03
ITGB4-212ENST00000584558 PHAXQ9H814 394 aaKnown RBP15.23■□□□□ 0.03
ITGB4-212ENST00000584558 CCDC66A2RUB6 948 aa15.22■□□□□ 0.03
ITGB4-212ENST00000584558 SLFN14P0C7P3 912 aa15.22■□□□□ 0.03
ITGB4-212ENST00000584558 C5P01031 1676 aa15.22■□□□□ 0.03
ITGB4-212ENST00000584558 BRD1O95696 1058 aa15.22■□□□□ 0.03
ITGB4-212ENST00000584558 TTC22Q5TAA0 569 aa15.22■□□□□ 0.03
ITGB4-212ENST00000584558 CTNNA3Q9UI47 895 aa15.22■□□□□ 0.03
ITGB4-212ENST00000584558 COL5A2P05997 1499 aaPredicted RBP15.22■□□□□ 0.03
ITGB4-212ENST00000584558 ERICH4A6NGS2 130 aa15.22■□□□□ 0.03
ITGB4-212ENST00000584558 NEK4P51957 841 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms