RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 AFDNP55196 1824 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-234ENST00000584525 NBPF5PQ86XG9 351 aaPredicted RBP17.44■□□□□ 0.38
CDK5RAP3-234ENST00000584525 SBF1O95248 1867 aa17.44■□□□□ 0.38
CDK5RAP3-234ENST00000584525 COL3A1P02461 1466 aaPredicted RBP17.44■□□□□ 0.38
CDK5RAP3-234ENST00000584525 CEMIPQ8WUJ3 1361 aa17.43■□□□□ 0.38
CDK5RAP3-234ENST00000584525 ZNF316A6NFI3 1004 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP3-234ENST00000584525 NUDCQ9Y266 331 aa17.43■□□□□ 0.38
CDK5RAP3-234ENST00000584525 PRAMEF22A3QJZ6 481 aa17.42■□□□□ 0.38
CDK5RAP3-234ENST00000584525 CLEC4GQ6UXB4 293 aa17.42■□□□□ 0.38
CDK5RAP3-234ENST00000584525 RTF1Q92541 710 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP3-234ENST00000584525 RSPH6AQ9H0K4 717 aa17.42■□□□□ 0.38
CDK5RAP3-234ENST00000584525 CREBZFQ9NS37 354 aa17.42■□□□□ 0.38
CDK5RAP3-234ENST00000584525 MKRN1Q9UHC7 482 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP3-234ENST00000584525 ZNF652Q9Y2D9 606 aa17.42■□□□□ 0.38
CDK5RAP3-234ENST00000584525 SNRPA1P09661 255 aaKnown RBP17.41■□□□□ 0.38
CDK5RAP3-234ENST00000584525 POTEIP0CG38 1075 aa17.41■□□□□ 0.38
CDK5RAP3-234ENST00000584525 POTEJP0CG39 1038 aa17.41■□□□□ 0.38
CDK5RAP3-234ENST00000584525 MCM10Q7L590 875 aa17.41■□□□□ 0.38
CDK5RAP3-234ENST00000584525 UBR2Q8IWV8 1755 aa17.4■□□□□ 0.38
CDK5RAP3-234ENST00000584525 IQCA1LA6NCM1 817 aa17.4■□□□□ 0.38
CDK5RAP3-234ENST00000584525 U2AF1L5P0DN76 240 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP3-234ENST00000584525 PPP2R1AP30153 589 aa17.4■□□□□ 0.38
CDK5RAP3-234ENST00000584525 U2AF1Q01081 240 aaKnown RBP eCLIP17.4■□□□□ 0.38
CDK5RAP3-234ENST00000584525 CCDC93Q567U6 631 aa17.4■□□□□ 0.38
CDK5RAP3-234ENST00000584525 TPTE2Q6XPS3 522 aa17.4■□□□□ 0.38
CDK5RAP3-234ENST00000584525 DLEC1Q9Y238 1755 aa17.4■□□□□ 0.38
CDK5RAP3-234ENST00000584525 FAM177BA6PVY3 158 aa17.39■□□□□ 0.37
CDK5RAP3-234ENST00000584525 NPR1P16066 1061 aa17.39■□□□□ 0.37
CDK5RAP3-234ENST00000584525 RALBP1Q15311 655 aa17.39■□□□□ 0.37
CDK5RAP3-234ENST00000584525 C7orf43Q8WVR3 580 aa17.39■□□□□ 0.37
CDK5RAP3-234ENST00000584525 NIP7Q9Y221 180 aaKnown RBP eCLIP17.39■□□□□ 0.37
CDK5RAP3-234ENST00000584525 LDHDQ86WU2 507 aa17.38■□□□□ 0.37
CDK5RAP3-234ENST00000584525 ZNF277Q9NRM2 450 aaPredicted RBP17.38■□□□□ 0.37
CDK5RAP3-234ENST00000584525 TIAM2Q8IVF5 1701 aa17.38■□□□□ 0.37
CDK5RAP3-234ENST00000584525 FKBP4Q02790 459 aaKnown RBP eCLIP17.37■□□□□ 0.37
CDK5RAP3-234ENST00000584525 DCTN1Q14203 1278 aa17.37■□□□□ 0.37
CDK5RAP3-234ENST00000584525 TAF1DQ9H5J8 278 aaPredicted RBP17.37■□□□□ 0.37
CDK5RAP3-234ENST00000584525 SCN7AQ01118 1682 aa17.36■□□□□ 0.37
CDK5RAP3-234ENST00000584525 NBPF26B4DH59 902 aa17.36■□□□□ 0.37
CDK5RAP3-234ENST00000584525 NEFMP07197 916 aa17.36■□□□□ 0.37
CDK5RAP3-234ENST00000584525 GTF2E1P29083 439 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP3-234ENST00000584525 EAPPQ56P03 285 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP3-234ENST00000584525 NBPF10Q6P3W6 841 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-234ENST00000584525 NBPF15Q8N660 670 aa17.36■□□□□ 0.37
CDK5RAP3-234ENST00000584525 L3MBTL3Q96JM7 780 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP3-234ENST00000584525 KLRG2A4D1S0 409 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP3-234ENST00000584525 OLFM4Q6UX06 510 aa17.35■□□□□ 0.37
CDK5RAP3-234ENST00000584525 RTKN2Q8IZC4 609 aa17.35■□□□□ 0.37
CDK5RAP3-234ENST00000584525 CLEC11AQ9Y240 323 aa17.35■□□□□ 0.37
CDK5RAP3-234ENST00000584525 ANKRD31Q8N7Z5 1873 aa17.35■□□□□ 0.37
CDK5RAP3-234ENST00000584525 COL11A2P13942 1736 aaPredicted RBP17.34■□□□□ 0.37
CDK5RAP3-234ENST00000584525 ZNF541Q9H0D2 1346 aa17.34■□□□□ 0.37
CDK5RAP3-234ENST00000584525 PASKQ96RG2 1323 aa17.33■□□□□ 0.36
CDK5RAP3-234ENST00000584525 RGL2O15211 777 aa17.33■□□□□ 0.36
CDK5RAP3-234ENST00000584525 HTATSF1O43719 755 aaKnown RBP17.33■□□□□ 0.36
CDK5RAP3-234ENST00000584525 ALDH1B1P30837 517 aa17.33■□□□□ 0.36
CDK5RAP3-234ENST00000584525 TAF7Q15545 349 aaPredicted RBP17.33■□□□□ 0.36
CDK5RAP3-234ENST00000584525 HLFQ16534 295 aa17.33■□□□□ 0.36
CDK5RAP3-234ENST00000584525 NGEFQ8N5V2 710 aa17.33■□□□□ 0.36
CDK5RAP3-234ENST00000584525 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.36
CDK5RAP3-234ENST00000584525 HACL1Q9UJ83 578 aa17.33■□□□□ 0.36
CDK5RAP3-234ENST00000584525 CNTNAP1P78357 1384 aa17.32■□□□□ 0.36
CDK5RAP3-234ENST00000584525 TMEM88BA6NKF7 163 aa17.32■□□□□ 0.36
CDK5RAP3-234ENST00000584525 EPHX2P34913 555 aa17.32■□□□□ 0.36
CDK5RAP3-234ENST00000584525 SYNE4Q8N205 404 aa17.32■□□□□ 0.36
CDK5RAP3-234ENST00000584525 MYBBP1AQ9BQG0 1328 aaKnown RBP17.31■□□□□ 0.36
CDK5RAP3-234ENST00000584525 IARSP41252 1262 aaKnown RBP17.31■□□□□ 0.36
CDK5RAP3-234ENST00000584525 AIDAQ96BJ3 306 aa17.31■□□□□ 0.36
CDK5RAP3-234ENST00000584525 SLX4Q8IY92 1834 aa17.31■□□□□ 0.36
CDK5RAP3-234ENST00000584525 FOXN1O15353 648 aa17.3■□□□□ 0.36
CDK5RAP3-234ENST00000584525 ITGBL1O95965 494 aaPredicted RBP17.3■□□□□ 0.36
CDK5RAP3-234ENST00000584525 VEGFBP49765 207 aa17.3■□□□□ 0.36
CDK5RAP3-234ENST00000584525 FER1L6Q2WGJ9 1857 aa17.3■□□□□ 0.36
CDK5RAP3-234ENST00000584525 VIRMAQ69YN4 1812 aaKnown RBP17.3■□□□□ 0.36
CDK5RAP3-234ENST00000584525 RNF123Q5XPI4 1314 aa17.29■□□□□ 0.36
CDK5RAP3-234ENST00000584525 FZD9O00144 591 aa17.29■□□□□ 0.36
CDK5RAP3-234ENST00000584525 PNMA8AQ86V59 439 aaPredicted RBP17.29■□□□□ 0.36
CDK5RAP3-234ENST00000584525 NUTM1Q86Y26 1132 aa17.29■□□□□ 0.36
CDK5RAP3-234ENST00000584525 JDP2Q8WYK2 163 aa17.29■□□□□ 0.36
CDK5RAP3-234ENST00000584525 NYXQ9GZU5 481 aa17.29■□□□□ 0.36
CDK5RAP3-234ENST00000584525 SIPA1L3O60292 1781 aaPredicted RBP17.29■□□□□ 0.36
CDK5RAP3-234ENST00000584525 MAP1SQ66K74 1059 aaPredicted RBP17.28■□□□□ 0.36
CDK5RAP3-234ENST00000584525 CNTROBQ8N137 903 aa17.28■□□□□ 0.36
CDK5RAP3-234ENST00000584525 PNNQ9H307 717 aaKnown RBP17.28■□□□□ 0.36
CDK5RAP3-234ENST00000584525 CCDC88AQ3V6T2 1871 aa17.27■□□□□ 0.36
CDK5RAP3-234ENST00000584525 ANP32CO43423 234 aa17.27■□□□□ 0.36
CDK5RAP3-234ENST00000584525 CTCFP49711 727 aaPredicted RBP17.27■□□□□ 0.36
CDK5RAP3-234ENST00000584525 KIF6Q6ZMV9 814 aa17.27■□□□□ 0.36
CDK5RAP3-234ENST00000584525 GPC2Q8N158 579 aa17.27■□□□□ 0.36
CDK5RAP3-234ENST00000584525 PNISRQ8TF01 805 aaKnown RBP17.27■□□□□ 0.36
CDK5RAP3-234ENST00000584525 PSMD1Q99460 953 aa17.27■□□□□ 0.36
CDK5RAP3-234ENST00000584525 RRP7AQ9Y3A4 280 aaKnown RBP17.27■□□□□ 0.36
CDK5RAP3-234ENST00000584525 GJA3Q9Y6H8 435 aa17.27■□□□□ 0.36
CDK5RAP3-234ENST00000584525 ERVV-1B6SEH8 477 aa17.26■□□□□ 0.35
CDK5RAP3-234ENST00000584525 EIF6P56537 245 aaKnown RBP17.26■□□□□ 0.35
CDK5RAP3-234ENST00000584525 WDR43Q15061 677 aaKnown RBP eCLIP17.26■□□□□ 0.35
CDK5RAP3-234ENST00000584525 CRY2Q49AN0 593 aa17.26■□□□□ 0.35
CDK5RAP3-234ENST00000584525 RPGRQ92834 1020 aaKnown RBP17.26■□□□□ 0.35
CDK5RAP3-234ENST00000584525 PRDM10Q9NQV6 1147 aa17.26■□□□□ 0.35
CDK5RAP3-234ENST00000584525 MAP3K15Q6ZN16 1313 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms