RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 KCNF1Q9H3M0 494 aa10.38□□□□□ -0.75
BDNF-219ENST00000584049 BCL2L12Q9HB09 334 aa10.38□□□□□ -0.75
BDNF-219ENST00000584049 PDRG1Q9NUG6 133 aa10.38□□□□□ -0.75
BDNF-219ENST00000584049 DIP2BQ9P265 1576 aa10.38□□□□□ -0.75
BDNF-219ENST00000584049 CTIFO43310 598 aaKnown RBP10.37□□□□□ -0.75
BDNF-219ENST00000584049 SYCP1Q15431 976 aa10.37□□□□□ -0.75
BDNF-219ENST00000584049 ANKRD7Q92527 254 aa10.37□□□□□ -0.75
BDNF-219ENST00000584049 CYP46A1Q9Y6A2 500 aa10.37□□□□□ -0.75
BDNF-219ENST00000584049 DNM1Q05193 864 aaKnown RBP10.37□□□□□ -0.75
BDNF-219ENST00000584049 MTX1Q13505 466 aa10.37□□□□□ -0.75
BDNF-219ENST00000584049 MED1Q15648 1581 aaPredicted RBP10.37□□□□□ -0.75
BDNF-219ENST00000584049 PLEKHG1Q9ULL1 1385 aa10.37□□□□□ -0.75
BDNF-219ENST00000584049 ZSCAN20P17040 1043 aaPredicted RBP10.37□□□□□ -0.75
BDNF-219ENST00000584049 PDCP20941 246 aa10.37□□□□□ -0.75
BDNF-219ENST00000584049 AMPHP49418 695 aa10.37□□□□□ -0.75
BDNF-219ENST00000584049 KRT85P78386 507 aa10.37□□□□□ -0.75
BDNF-219ENST00000584049 HDGFL1Q5TGJ6 251 aa10.37□□□□□ -0.75
BDNF-219ENST00000584049 PIK3C2AO00443 1686 aa10.37□□□□□ -0.75
BDNF-219ENST00000584049 SRGAP3O43295 1099 aa10.36□□□□□ -0.75
BDNF-219ENST00000584049 CCDC83Q8IWF9 413 aa10.36□□□□□ -0.75
BDNF-219ENST00000584049 AP5Z1O43299 807 aa10.36□□□□□ -0.75
BDNF-219ENST00000584049 LARGE1O95461 756 aa10.36□□□□□ -0.75
BDNF-219ENST00000584049 MAP3K11Q16584 847 aa10.36□□□□□ -0.75
BDNF-219ENST00000584049 C17orf53Q8N3J3 647 aaPredicted RBP10.36□□□□□ -0.75
BDNF-219ENST00000584049 PYCARDQ9ULZ3 195 aa10.36□□□□□ -0.75
BDNF-219ENST00000584049 TNRQ92752 1358 aa10.36□□□□□ -0.75
BDNF-219ENST00000584049 CWC27Q6UX04 472 aaKnown RBP10.36□□□□□ -0.75
BDNF-219ENST00000584049 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.36□□□□□ -0.75
BDNF-219ENST00000584049 GPATCH3Q96I76 525 aa10.36□□□□□ -0.75
BDNF-219ENST00000584049 JAKMIP1Q96N16 626 aaKnown RBP10.36□□□□□ -0.75
BDNF-219ENST00000584049 NUP62CLQ9H1M0 184 aa10.36□□□□□ -0.75
BDNF-219ENST00000584049 PDCL2Q8N4E4 241 aa10.36□□□□□ -0.75
BDNF-219ENST00000584049 MPNDQ8N594 471 aa10.36□□□□□ -0.75
BDNF-219ENST00000584049 IL17REQ8NFR9 667 aa10.36□□□□□ -0.75
BDNF-219ENST00000584049 HIP1O00291 1037 aa10.35□□□□□ -0.75
BDNF-219ENST00000584049 MAP4K4O95819 1239 aaPredicted RBP10.35□□□□□ -0.75
BDNF-219ENST00000584049 RBM43Q6ZSC3 357 aaKnown RBP10.35□□□□□ -0.75
BDNF-219ENST00000584049 ALDH8A1Q9H2A2 487 aaPredicted RBP10.35□□□□□ -0.75
BDNF-219ENST00000584049 SNRKQ9NRH2 765 aa10.35□□□□□ -0.75
BDNF-219ENST00000584049 ZKSCAN1P17029 563 aaPredicted RBP10.35□□□□□ -0.75
BDNF-219ENST00000584049 ERC1Q8IUD2 1116 aa10.35□□□□□ -0.75
BDNF-219ENST00000584049 DDX19AQ9NUU7 478 aaKnown RBP10.35□□□□□ -0.75
BDNF-219ENST00000584049 HDAC5Q9UQL6 1122 aa10.35□□□□□ -0.75
BDNF-219ENST00000584049 KDM3BQ7LBC6 1761 aa10.35□□□□□ -0.75
BDNF-219ENST00000584049 RIOK3O14730 519 aaKnown RBP10.35□□□□□ -0.75
BDNF-219ENST00000584049 ST3GAL1Q11201 340 aa10.35□□□□□ -0.75
BDNF-219ENST00000584049 NECTIN1Q15223 517 aa10.35□□□□□ -0.75
BDNF-219ENST00000584049 PPP4R3BQ5MIZ7 849 aa10.35□□□□□ -0.75
BDNF-219ENST00000584049 BEND3Q5T5X7 828 aa10.35□□□□□ -0.75
BDNF-219ENST00000584049 SCAND2PQ9GZW5 306 aaPredicted RBP10.35□□□□□ -0.75
BDNF-219ENST00000584049 ECHDC1Q9NTX5 307 aa10.35□□□□□ -0.75
BDNF-219ENST00000584049 SPG7Q9UQ90 795 aa10.35□□□□□ -0.75
BDNF-219ENST00000584049 CEMIPQ8WUJ3 1361 aa10.35□□□□□ -0.75
BDNF-219ENST00000584049 CAVIN2O95810 425 aa10.34□□□□□ -0.75
BDNF-219ENST00000584049 PSMA5P28066 241 aa10.34□□□□□ -0.75
BDNF-219ENST00000584049 TYRO3Q06418 890 aa10.34□□□□□ -0.75
BDNF-219ENST00000584049 CLASRPQ8N2M8 674 aaKnown RBP10.34□□□□□ -0.75
BDNF-219ENST00000584049 DNAAF4Q8WXU2 420 aa10.34□□□□□ -0.75
BDNF-219ENST00000584049 EVI5LQ96CN4 794 aa10.34□□□□□ -0.75
BDNF-219ENST00000584049 FEZ1Q99689 392 aa10.34□□□□□ -0.75
BDNF-219ENST00000584049 KIF20AO95235 890 aa10.34□□□□□ -0.75
BDNF-219ENST00000584049 ANKRD1Q15327 319 aa10.34□□□□□ -0.75
BDNF-219ENST00000584049 TTC6Q86TZ1 520 aa10.34□□□□□ -0.75
BDNF-219ENST00000584049 TSC1Q92574 1164 aa10.34□□□□□ -0.75
BDNF-219ENST00000584049 NECTIN2Q92692 538 aa10.34□□□□□ -0.75
BDNF-219ENST00000584049 MRVI1Q9Y6F6 885 aa10.34□□□□□ -0.75
BDNF-219ENST00000584049 NPHP3Q7Z494 1330 aa10.34□□□□□ -0.75
BDNF-219ENST00000584049 VPS37CA5D8V6 355 aaPredicted RBP10.34□□□□□ -0.75
BDNF-219ENST00000584049 PLCB2Q00722 1185 aa10.34□□□□□ -0.75
BDNF-219ENST00000584049 ME3Q16798 604 aa10.34□□□□□ -0.75
BDNF-219ENST00000584049 PTH1RQ03431 593 aa10.33□□□□□ -0.76
BDNF-219ENST00000584049 PRPF40BQ6NWY9 871 aaKnown RBP10.33□□□□□ -0.76
BDNF-219ENST00000584049 ARID3AQ99856 593 aa10.33□□□□□ -0.76
BDNF-219ENST00000584049 PHAXQ9H814 394 aaKnown RBP10.33□□□□□ -0.76
BDNF-219ENST00000584049 MARF1Q9Y4F3 1742 aaKnown RBP10.33□□□□□ -0.76
BDNF-219ENST00000584049 ADCK5Q3MIX3 580 aa10.33□□□□□ -0.76
BDNF-219ENST00000584049 LARP1BQ659C4 914 aaKnown RBP10.33□□□□□ -0.76
BDNF-219ENST00000584049 TDRD7Q8NHU6 1098 aaKnown RBP10.33□□□□□ -0.76
BDNF-219ENST00000584049 JARID2Q92833 1246 aaPredicted RBP10.33□□□□□ -0.76
BDNF-219ENST00000584049 SMTNL1A8MU46 457 aa10.33□□□□□ -0.76
BDNF-219ENST00000584049 SOX12O15370 315 aa10.33□□□□□ -0.76
BDNF-219ENST00000584049 NBPF7P0C2Y1 421 aaPredicted RBP10.32□□□□□ -0.76
BDNF-219ENST00000584049 CPA1P15085 419 aa10.32□□□□□ -0.76
BDNF-219ENST00000584049 HOXC9P31274 260 aa10.32□□□□□ -0.76
BDNF-219ENST00000584049 PRDM10Q9NQV6 1147 aa10.32□□□□□ -0.76
BDNF-219ENST00000584049 ALDH1L1O75891 902 aa10.32□□□□□ -0.76
BDNF-219ENST00000584049 CDC25BP30305 580 aa10.32□□□□□ -0.76
BDNF-219ENST00000584049 ATP2B3Q16720 1220 aa10.32□□□□□ -0.76
BDNF-219ENST00000584049 CREB3L3Q68CJ9 461 aa10.32□□□□□ -0.76
BDNF-219ENST00000584049 PLA2G4DQ86XP0 818 aa10.32□□□□□ -0.76
BDNF-219ENST00000584049 SPC24Q8NBT2 197 aa10.32□□□□□ -0.76
BDNF-219ENST00000584049 MAP4K1Q92918 833 aa10.32□□□□□ -0.76
BDNF-219ENST00000584049 LARP6Q9BRS8 491 aaKnown RBP10.32□□□□□ -0.76
BDNF-219ENST00000584049 CLSTN2Q9H4D0 955 aa10.32□□□□□ -0.76
BDNF-219ENST00000584049 ANKARQ7Z5J8 1434 aa10.32□□□□□ -0.76
BDNF-219ENST00000584049 GIGYF1O75420 1035 aaPredicted RBP10.32□□□□□ -0.76
BDNF-219ENST00000584049 PTGS1P23219 599 aa10.32□□□□□ -0.76
BDNF-219ENST00000584049 OS9Q13438 667 aaPredicted RBP10.32□□□□□ -0.76
BDNF-219ENST00000584049 TNMDQ9H2S6 317 aa10.32□□□□□ -0.76
BDNF-219ENST00000584049 RBM8AQ9Y5S9 174 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms