RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 LGR5O75473 907 aa7.68□□□□□ -1.18
PPP4R1-227ENST00000583988 SEC13P55735 322 aa7.68□□□□□ -1.18
PPP4R1-227ENST00000583988 CRTC2Q53ET0 693 aaPredicted RBP7.68□□□□□ -1.18
PPP4R1-227ENST00000583988 GOLGA6L1Q8N7Z2 621 aa7.68□□□□□ -1.18
PPP4R1-227ENST00000583988 RHPN1Q8TCX5 695 aa7.68□□□□□ -1.18
PPP4R1-227ENST00000583988 CHMP7Q8WUX9 453 aaPredicted RBP7.68□□□□□ -1.18
PPP4R1-227ENST00000583988 EDARADDQ8WWZ3 215 aa7.68□□□□□ -1.18
PPP4R1-227ENST00000583988 HINFPQ9BQA5 517 aa7.68□□□□□ -1.18
PPP4R1-227ENST00000583988 RRAGCQ9HB90 399 aa7.68□□□□□ -1.18
PPP4R1-227ENST00000583988 HCN2Q9UL51 889 aa7.68□□□□□ -1.18
PPP4R1-227ENST00000583988 PPP1R12BO60237 982 aaPredicted RBP7.67□□□□□ -1.18
PPP4R1-227ENST00000583988 AMPD1P23109 780 aa7.67□□□□□ -1.18
PPP4R1-227ENST00000583988 BEND7Q8N7W2 519 aaPredicted RBP7.67□□□□□ -1.18
PPP4R1-227ENST00000583988 NEURL1BA8MQ27 555 aa7.66□□□□□ -1.18
PPP4R1-227ENST00000583988 FAM157BP0CG42 384 aa7.66□□□□□ -1.18
PPP4R1-227ENST00000583988 DPYDQ12882 1025 aa7.66□□□□□ -1.18
PPP4R1-227ENST00000583988 KANK3Q6NY19 840 aa7.66□□□□□ -1.18
PPP4R1-227ENST00000583988 SCG3Q8WXD2 468 aaKnown RBP7.66□□□□□ -1.18
PPP4R1-227ENST00000583988 PBXIP1Q96AQ6 731 aa7.66□□□□□ -1.18
PPP4R1-227ENST00000583988 STRN4Q9NRL3 753 aa7.66□□□□□ -1.18
PPP4R1-227ENST00000583988 FAM196BA6NMK8 535 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 PHF20L1A8MW92 1017 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 USP17L15C9J2P7 530 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 USP17L10C9JJH3 530 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 USP17L13C9JLJ4 530 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 USP17L12C9JPN9 530 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 USP17L11C9JVI0 530 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 USP17L21D6R901 530 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 USP17L18D6R9N7 530 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 USP17L22D6RA61 530 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 USP17L17D6RBQ6 530 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 USP17L19D6RCP7 530 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 USP17L20D6RJB6 530 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 C21orf2O43822 256 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 PPP1R15AO75807 674 aaPredicted RBP7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 ARAFP10398 606 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 SNRPNP63162 240 aaKnown RBP7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 USP17L24Q0WX57 530 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 PTK7Q13308 1070 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 CDCA8Q53HL2 280 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 SAMD5Q5TGI4 173 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 ATAD2Q6PL18 1390 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 SLCO4C1Q6ZQN7 724 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 NGLY1Q96IV0 654 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 PHACTR1Q9C0D0 580 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 MARK1Q9P0L2 795 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 PRR12Q9ULL5 1215 aa7.65□□□□□ -1.18
PPP4R1-227ENST00000583988 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.64□□□□□ -1.19
PPP4R1-227ENST00000583988 PCBP4P57723 403 aaKnown RBP7.64□□□□□ -1.19
PPP4R1-227ENST00000583988 GAS2L2Q8NHY3 880 aa7.64□□□□□ -1.19
PPP4R1-227ENST00000583988 C7orf43Q8WVR3 580 aa7.64□□□□□ -1.19
PPP4R1-227ENST00000583988 HSH2DQ96JZ2 352 aa7.64□□□□□ -1.19
PPP4R1-227ENST00000583988 ARID3AQ99856 593 aa7.64□□□□□ -1.19
PPP4R1-227ENST00000583988 EFSO43281 561 aa7.63□□□□□ -1.19
PPP4R1-227ENST00000583988 EPXP11678 715 aa7.63□□□□□ -1.19
PPP4R1-227ENST00000583988 ADH6P28332 368 aa7.63□□□□□ -1.19
PPP4R1-227ENST00000583988 HIRAP54198 1017 aaPredicted RBP7.63□□□□□ -1.19
PPP4R1-227ENST00000583988 FAM182BQ5T319 152 aa7.63□□□□□ -1.19
PPP4R1-227ENST00000583988 C1orf53Q5VUE5 145 aa7.63□□□□□ -1.19
PPP4R1-227ENST00000583988 ANKMY2Q8IV38 441 aa7.63□□□□□ -1.19
PPP4R1-227ENST00000583988 GPC6Q9Y625 555 aaPredicted RBP7.63□□□□□ -1.19
PPP4R1-227ENST00000583988 ATG7O95352 703 aa7.62□□□□□ -1.19
PPP4R1-227ENST00000583988 ELOAQ14241 798 aaKnown RBP7.62□□□□□ -1.19
PPP4R1-227ENST00000583988 GRIN2CQ14957 1233 aa7.62□□□□□ -1.19
PPP4R1-227ENST00000583988 ALDH16A1Q8IZ83 802 aa7.62□□□□□ -1.19
PPP4R1-227ENST00000583988 ZNF280CQ8ND82 737 aa7.62□□□□□ -1.19
PPP4R1-227ENST00000583988 ARXQ96QS3 562 aa7.62□□□□□ -1.19
PPP4R1-227ENST00000583988 C2orf49Q9BVC5 232 aaPredicted RBP7.62□□□□□ -1.19
PPP4R1-227ENST00000583988 KLF15Q9UIH9 416 aa7.62□□□□□ -1.19
PPP4R1-227ENST00000583988 ACIN1Q9UKV3 1341 aaKnown RBP7.61□□□□□ -1.19
PPP4R1-227ENST00000583988 SFSWAPQ12872 951 aaKnown RBP7.61□□□□□ -1.19
PPP4R1-227ENST00000583988 LAMC2Q13753 1193 aa7.61□□□□□ -1.19
PPP4R1-227ENST00000583988 ZNF468Q5VIY5 522 aaPredicted RBP7.61□□□□□ -1.19
PPP4R1-227ENST00000583988 GPAT2Q6NUI2 795 aa7.61□□□□□ -1.19
PPP4R1-227ENST00000583988 BTBD6Q96KE9 485 aa7.61□□□□□ -1.19
PPP4R1-227ENST00000583988 SUSD3Q96L08 255 aa7.61□□□□□ -1.19
PPP4R1-227ENST00000583988 CEP63Q96MT8 703 aa7.61□□□□□ -1.19
PPP4R1-227ENST00000583988 ANKIB1Q9P2G1 1089 aa7.61□□□□□ -1.19
PPP4R1-227ENST00000583988 MKL2Q9ULH7 1088 aa7.61□□□□□ -1.19
PPP4R1-227ENST00000583988 POTEAQ6S8J7 498 aa7.6□□□□□ -1.19
PPP4R1-227ENST00000583988 FCHSD1Q86WN1 690 aa7.6□□□□□ -1.19
PPP4R1-227ENST00000583988 RAB44Q7Z6P3 723 aaPredicted RBP7.59□□□□□ -1.19
PPP4R1-227ENST00000583988 SYT9Q86SS6 491 aa7.59□□□□□ -1.19
PPP4R1-227ENST00000583988 STAG2Q8N3U4 1231 aa7.59□□□□□ -1.19
PPP4R1-227ENST00000583988 FAM200AQ8TCP9 573 aa7.59□□□□□ -1.19
PPP4R1-227ENST00000583988 DCAF5Q96JK2 942 aa7.59□□□□□ -1.19
PPP4R1-227ENST00000583988 BRD7Q9NPI1 651 aa7.59□□□□□ -1.19
PPP4R1-227ENST00000583988 AVENQ9NQS1 362 aaPredicted RBP7.59□□□□□ -1.19
PPP4R1-227ENST00000583988 CHSY3Q70JA7 882 aa7.58□□□□□ -1.2
PPP4R1-227ENST00000583988 SLC30A3Q99726 388 aa7.58□□□□□ -1.2
PPP4R1-227ENST00000583988 NOVA2Q9UNW9 492 aaKnown RBP7.58□□□□□ -1.2
PPP4R1-227ENST00000583988 IGFBP4P22692 258 aa7.57□□□□□ -1.2
PPP4R1-227ENST00000583988 HOXB4P17483 251 aaPredicted RBP7.56□□□□□ -1.2
PPP4R1-227ENST00000583988 TYRO3Q06418 890 aa7.56□□□□□ -1.2
PPP4R1-227ENST00000583988 PDE4CQ08493 712 aa7.56□□□□□ -1.2
PPP4R1-227ENST00000583988 SPEM2Q0P670 501 aa7.56□□□□□ -1.2
PPP4R1-227ENST00000583988 LINC00114Q6XXX2 140 aa7.56□□□□□ -1.2
PPP4R1-227ENST00000583988 BTLAQ7Z6A9 289 aa7.56□□□□□ -1.2
PPP4R1-227ENST00000583988 ZMIZ1Q9ULJ6 1067 aa7.56□□□□□ -1.2
PPP4R1-227ENST00000583988 ALAS2P22557 587 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 202 ms