RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 A0A1W2PRG0 241 aa13.02□□□□□ -0.32
MSI2-217ENST00000583705 KIF5CO60282 957 aa13.02□□□□□ -0.32
MSI2-217ENST00000583705 STX6O43752 255 aa13.02□□□□□ -0.33
MSI2-217ENST00000583705 THUMPD2Q9BTF0 503 aaKnown RBP13.02□□□□□ -0.33
MSI2-217ENST00000583705 K7ELQ4 463 aaPredicted RBP13.02□□□□□ -0.33
MSI2-217ENST00000583705 MRVI1Q9Y6F6 885 aa13.02□□□□□ -0.33
MSI2-217ENST00000583705 MXRA7P84157 204 aa13.02□□□□□ -0.33
MSI2-217ENST00000583705 CNNM3Q8NE01 707 aa13.02□□□□□ -0.33
MSI2-217ENST00000583705 STX8Q9UNK0 236 aa13.02□□□□□ -0.33
MSI2-217ENST00000583705 CALM1P0DP23 149 aa13.02□□□□□ -0.33
MSI2-217ENST00000583705 CALM2P0DP24 149 aa13.02□□□□□ -0.33
MSI2-217ENST00000583705 CALM3P0DP25 149 aa13.02□□□□□ -0.33
MSI2-217ENST00000583705 SPATA24Q86W54 205 aa13.02□□□□□ -0.33
MSI2-217ENST00000583705 ATP5J2-PTCD1G3V325 749 aa13.01□□□□□ -0.33
MSI2-217ENST00000583705 FOXO3O43524 673 aa13.01□□□□□ -0.33
MSI2-217ENST00000583705 ATP2C2O75185 946 aa13.01□□□□□ -0.33
MSI2-217ENST00000583705 KRT32Q14532 448 aa13.01□□□□□ -0.33
MSI2-217ENST00000583705 CFAP58Q5T655 872 aa13.01□□□□□ -0.33
MSI2-217ENST00000583705 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
MSI2-217ENST00000583705 BEGAINQ9BUH8 593 aa13.01□□□□□ -0.33
MSI2-217ENST00000583705 LRRC45Q96CN5 670 aa13.01□□□□□ -0.33
MSI2-217ENST00000583705 SHTN1A0MZ66 631 aa13.01□□□□□ -0.33
MSI2-217ENST00000583705 OGFOD1Q8N543 542 aa13.01□□□□□ -0.33
MSI2-217ENST00000583705 TRMT1Q9NXH9 659 aaKnown RBP13.01□□□□□ -0.33
MSI2-217ENST00000583705 NBPF6Q5VWK0 638 aa13.01□□□□□ -0.33
MSI2-217ENST00000583705 NBPF5PQ86XG9 351 aaPredicted RBP13.01□□□□□ -0.33
MSI2-217ENST00000583705 NBPF4Q96M43 638 aa13.01□□□□□ -0.33
MSI2-217ENST00000583705 URI1O94763 535 aaPredicted RBP13.01□□□□□ -0.33
MSI2-217ENST00000583705 CHD1LQ86WJ1 897 aa13.01□□□□□ -0.33
MSI2-217ENST00000583705 HAUS7Q99871 368 aa13.01□□□□□ -0.33
MSI2-217ENST00000583705 FAM107BQ9H098 131 aa13.01□□□□□ -0.33
MSI2-217ENST00000583705 TAOK3Q9H2K8 898 aa13.01□□□□□ -0.33
MSI2-217ENST00000583705 RIMBP2O15034 1052 aa13□□□□□ -0.33
MSI2-217ENST00000583705 MAATS1Q7Z4T9 603 aa13□□□□□ -0.33
MSI2-217ENST00000583705 RAPGEF3O95398 923 aa13□□□□□ -0.33
MSI2-217ENST00000583705 NCBP1Q09161 790 aaKnown RBP13□□□□□ -0.33
MSI2-217ENST00000583705 TOP1P11387 765 aaKnown RBP13□□□□□ -0.33
MSI2-217ENST00000583705 PPP2R1AP30153 589 aa13□□□□□ -0.33
MSI2-217ENST00000583705 POLR3GO15318 223 aaPredicted RBP13□□□□□ -0.33
MSI2-217ENST00000583705 CCDC196A0A1B0GTZ2 297 aa13□□□□□ -0.33
MSI2-217ENST00000583705 SPOUT1Q5T280 376 aaKnown RBP13□□□□□ -0.33
MSI2-217ENST00000583705 TRERF1Q96PN7 1200 aa13□□□□□ -0.33
MSI2-217ENST00000583705 CSPG5O95196 566 aa13□□□□□ -0.33
MSI2-217ENST00000583705 SLU7O95391 586 aaKnown RBP13□□□□□ -0.33
MSI2-217ENST00000583705 TTC21AQ8NDW8 1320 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 USO1O60763 962 aaKnown RBP12.99□□□□□ -0.33
MSI2-217ENST00000583705 BAG3O95817 575 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 MAP3K11Q16584 847 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 TCP11L1Q9NUJ3 509 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 TMEM67Q5HYA8 995 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 UBXN4Q92575 508 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 ALS2CR12Q96Q35 445 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 HDAC9Q9UKV0 1011 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 NOD1Q9Y239 953 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 SYCE3A1L190 88 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 TBCAO75347 108 aaKnown RBP12.99□□□□□ -0.33
MSI2-217ENST00000583705 TSPY3P0CV98 308 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 TSPY8P0CW00 308 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 EEF2P13639 858 aaKnown RBP12.99□□□□□ -0.33
MSI2-217ENST00000583705 PAFAH1B1P43034 410 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 CCDC117Q8IWD4 279 aaPredicted RBP12.99□□□□□ -0.33
MSI2-217ENST00000583705 UBAP1LF5GYI3 381 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 JAG2Q9Y219 1238 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 TMCO4Q5TGY1 634 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 DUSP27Q5VZP5 1158 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 PPP6R1Q9UPN7 881 aa12.99□□□□□ -0.33
MSI2-217ENST00000583705 GSTA5Q7RTV2 222 aa12.98□□□□□ -0.33
MSI2-217ENST00000583705 WAPLQ7Z5K2 1190 aa12.98□□□□□ -0.33
MSI2-217ENST00000583705 GOLIM4O00461 696 aa12.98□□□□□ -0.33
MSI2-217ENST00000583705 MICU3Q86XE3 530 aa12.98□□□□□ -0.33
MSI2-217ENST00000583705 HMGB2P26583 209 aaKnown RBP12.98□□□□□ -0.33
MSI2-217ENST00000583705 LMOD1P29536 600 aaPredicted RBP12.98□□□□□ -0.33
MSI2-217ENST00000583705 CCDC175P0C221 793 aa12.98□□□□□ -0.33
MSI2-217ENST00000583705 STXBP4Q6ZWJ1 553 aa12.98□□□□□ -0.33
MSI2-217ENST00000583705 HEATR3Q7Z4Q2 680 aa12.98□□□□□ -0.33
MSI2-217ENST00000583705 CCDC160A6NGH7 325 aa12.98□□□□□ -0.33
MSI2-217ENST00000583705 ARID5AQ03989 594 aa12.98□□□□□ -0.33
MSI2-217ENST00000583705 PDE4BQ07343 736 aa12.98□□□□□ -0.33
MSI2-217ENST00000583705 PKD2L1Q9P0L9 805 aa12.98□□□□□ -0.33
MSI2-217ENST00000583705 F6X3S4 739 aa12.97□□□□□ -0.33
MSI2-217ENST00000583705 POLD1P28340 1107 aa12.97□□□□□ -0.33
MSI2-217ENST00000583705 HSP90AA4PQ58FG1 418 aa12.97□□□□□ -0.33
MSI2-217ENST00000583705 TBC1D5Q92609 795 aa12.97□□□□□ -0.33
MSI2-217ENST00000583705 SLC26A6Q9BXS9 759 aa12.97□□□□□ -0.33
MSI2-217ENST00000583705 JADE2Q9NQC1 790 aa12.97□□□□□ -0.33
MSI2-217ENST00000583705 FYCO1Q9BQS8 1478 aa12.97□□□□□ -0.33
MSI2-217ENST00000583705 TAF7Q15545 349 aaPredicted RBP12.97□□□□□ -0.33
MSI2-217ENST00000583705 CHRNA2Q15822 529 aa12.97□□□□□ -0.33
MSI2-217ENST00000583705 GINS2Q9Y248 185 aa12.97□□□□□ -0.33
MSI2-217ENST00000583705 SNX16P57768 344 aa12.97□□□□□ -0.33
MSI2-217ENST00000583705 PPP2R5CQ13362 524 aa12.97□□□□□ -0.33
MSI2-217ENST00000583705 PRKG1Q13976 671 aa12.96□□□□□ -0.33
MSI2-217ENST00000583705 RASA3Q14644 834 aa12.96□□□□□ -0.33
MSI2-217ENST00000583705 CCDC50Q8IVM0 306 aa12.96□□□□□ -0.33
MSI2-217ENST00000583705 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.33
MSI2-217ENST00000583705 CDC5LQ99459 802 aaKnown RBP12.96□□□□□ -0.33
MSI2-217ENST00000583705 LDHAL6AQ6ZMR3 332 aa12.96□□□□□ -0.33
MSI2-217ENST00000583705 SREK1Q8WXA9 508 aaKnown RBP12.96□□□□□ -0.33
MSI2-217ENST00000583705 BRPF3Q9ULD4 1205 aa12.96□□□□□ -0.33
MSI2-217ENST00000583705 HARSP12081 509 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms