RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 TBC1D9BQ66K14 1250 aa15.19■□□□□ 0.02
CASC3-208ENST00000583649 MAP1SQ66K74 1059 aaPredicted RBP15.19■□□□□ 0.02
CASC3-208ENST00000583649 CAPNS2Q96L46 248 aa15.19■□□□□ 0.02
CASC3-208ENST00000583649 ADAMTS7Q9UKP4 1686 aa15.19■□□□□ 0.02
CASC3-208ENST00000583649 FER1L6Q2WGJ9 1857 aa15.18■□□□□ 0.02
CASC3-208ENST00000583649 SRGNP10124 158 aa15.18■□□□□ 0.02
CASC3-208ENST00000583649 FKBP4Q02790 459 aaKnown RBP eCLIP15.18■□□□□ 0.02
CASC3-208ENST00000583649 GRM1Q13255 1194 aa15.18■□□□□ 0.02
CASC3-208ENST00000583649 GPC2Q8N158 579 aa15.18■□□□□ 0.02
CASC3-208ENST00000583649 JDP2Q8WYK2 163 aa15.18■□□□□ 0.02
CASC3-208ENST00000583649 DDX21Q9NR30 783 aaKnown RBP eCLIP15.18■□□□□ 0.02
CASC3-208ENST00000583649 ZNF330Q9Y3S2 320 aaPredicted RBP15.18■□□□□ 0.02
CASC3-208ENST00000583649 EIF5P55010 431 aaKnown RBP15.17■□□□□ 0.02
CASC3-208ENST00000583649 SLC39A6Q13433 755 aa15.17■□□□□ 0.02
CASC3-208ENST00000583649 RNF123Q5XPI4 1314 aa15.16■□□□□ 0.02
CASC3-208ENST00000583649 NPR1P16066 1061 aa15.15■□□□□ 0.02
CASC3-208ENST00000583649 EIF6P56537 245 aaKnown RBP15.15■□□□□ 0.02
CASC3-208ENST00000583649 AEBP1Q8IUX7 1158 aa15.15■□□□□ 0.02
CASC3-208ENST00000583649 RNMTO43148 476 aaKnown RBP15.14■□□□□ 0.01
CASC3-208ENST00000583649 ALDH1B1P30837 517 aa15.14■□□□□ 0.01
CASC3-208ENST00000583649 IL6STP40189 918 aaPredicted RBP15.14■□□□□ 0.01
CASC3-208ENST00000583649 CCDC24Q8N4L8 307 aa15.14■□□□□ 0.01
CASC3-208ENST00000583649 POLR3GLQ9BT43 218 aa15.14■□□□□ 0.01
CASC3-208ENST00000583649 MCOLN1Q9GZU1 580 aa15.14■□□□□ 0.01
CASC3-208ENST00000583649 ZNF277Q9NRM2 450 aaPredicted RBP15.14■□□□□ 0.01
CASC3-208ENST00000583649 TBC1D2BQ9UPU7 963 aa15.14■□□□□ 0.01
CASC3-208ENST00000583649 ZNF652Q9Y2D9 606 aa15.14■□□□□ 0.01
CASC3-208ENST00000583649 ZNF541Q9H0D2 1346 aa15.14■□□□□ 0.01
CASC3-208ENST00000583649 IARSP41252 1262 aaKnown RBP15.13■□□□□ 0.01
CASC3-208ENST00000583649 CYP4F22Q6NT55 531 aa15.13■□□□□ 0.01
CASC3-208ENST00000583649 MORC1Q86VD1 984 aa15.13■□□□□ 0.01
CASC3-208ENST00000583649 NBPF5PQ86XG9 351 aaPredicted RBP15.13■□□□□ 0.01
CASC3-208ENST00000583649 LGR6Q9HBX8 967 aa15.13■□□□□ 0.01
CASC3-208ENST00000583649 SCN11AQ9UI33 1791 aa15.12■□□□□ 0.01
CASC3-208ENST00000583649 FZD9O00144 591 aa15.12■□□□□ 0.01
CASC3-208ENST00000583649 DGKZQ13574 1117 aa15.12■□□□□ 0.01
CASC3-208ENST00000583649 BRPF1P55201 1214 aaPredicted RBP15.11■□□□□ 0.01
CASC3-208ENST00000583649 GRIPAP1Q4V328 841 aa15.11■□□□□ 0.01
CASC3-208ENST00000583649 TPTE2Q6XPS3 522 aa15.11■□□□□ 0.01
CASC3-208ENST00000583649 USP50Q70EL3 339 aaPredicted RBP15.11■□□□□ 0.01
CASC3-208ENST00000583649 GJA3Q9Y6H8 435 aa15.11■□□□□ 0.01
CASC3-208ENST00000583649 TLL2Q9Y6L7 1015 aa15.11■□□□□ 0.01
CASC3-208ENST00000583649 MRC1P22897 1456 aa15.1■□□□□ 0.01
CASC3-208ENST00000583649 TEFQ10587 303 aa15.1■□□□□ 0.01
CASC3-208ENST00000583649 CC2D2BQ6DHV5 1058 aa15.1■□□□□ 0.01
CASC3-208ENST00000583649 CLEC4GQ6UXB4 293 aa15.1■□□□□ 0.01
CASC3-208ENST00000583649 SYNE4Q8N205 404 aa15.1■□□□□ 0.01
CASC3-208ENST00000583649 C7orf43Q8WVR3 580 aa15.1■□□□□ 0.01
CASC3-208ENST00000583649 GTF2E1P29083 439 aaPredicted RBP15.09■□□□□ 0.01
CASC3-208ENST00000583649 HHIPL1Q96JK4 782 aa15.09■□□□□ 0.01
CASC3-208ENST00000583649 TMX4Q9H1E5 349 aaPredicted RBP15.09■□□□□ 0.01
CASC3-208ENST00000583649 TSKSQ9UJT2 592 aa15.09■□□□□ 0.01
CASC3-208ENST00000583649 ANKRD31Q8N7Z5 1873 aa15.09■□□□□ 0.01
CASC3-208ENST00000583649 SLX4Q8IY92 1834 aa15.08■□□□□ 0.01
CASC3-208ENST00000583649 DZIP3Q86Y13 1208 aaKnown RBP15.08■□□□□ 0
CASC3-208ENST00000583649 FMNL2Q96PY5 1086 aa15.08■□□□□ 0
CASC3-208ENST00000583649 PSMD1Q99460 953 aa15.08■□□□□ 0
CASC3-208ENST00000583649 COL11A2P13942 1736 aaPredicted RBP15.08■□□□□ 0
CASC3-208ENST00000583649 ADAMTSL1Q8N6G6 1762 aa15.08■□□□□ 0
CASC3-208ENST00000583649 THSD7BQ9C0I4 1608 aa15.07■□□□□ 0
CASC3-208ENST00000583649 IL13P35225 146 aa15.07■□□□□ 0
CASC3-208ENST00000583649 PRPF38BQ5VTL8 546 aaKnown RBP15.07■□□□□ 0
CASC3-208ENST00000583649 HEG1Q9ULI3 1381 aa15.07■□□□□ 0
CASC3-208ENST00000583649 ARFGEF2Q9Y6D5 1785 aa15.06■□□□□ 0
CASC3-208ENST00000583649 CAMTA2O94983 1202 aa15.06■□□□□ 0
CASC3-208ENST00000583649 ZNF790Q6PG37 636 aa15.06■□□□□ 0
CASC3-208ENST00000583649 SCN7AQ01118 1682 aa15.06■□□□□ 0
CASC3-208ENST00000583649 AOC2O75106 756 aa15.05■□□□□ -0
CASC3-208ENST00000583649 NOGQ13253 232 aa15.05■□□□□ -0
CASC3-208ENST00000583649 CST9Q5W186 159 aa15.05■□□□□ -0
CASC3-208ENST00000583649 SAPCD2Q86UD0 394 aa15.05■□□□□ -0
CASC3-208ENST00000583649 LARGE2Q8N3Y3 721 aa15.05■□□□□ -0
CASC3-208ENST00000583649 ZNF496Q96IT1 587 aaPredicted RBP15.05■□□□□ -0
CASC3-208ENST00000583649 KLRG2A4D1S0 409 aaPredicted RBP15.04■□□□□ -0
CASC3-208ENST00000583649 RGL2O15211 777 aa15.04■□□□□ -0
CASC3-208ENST00000583649 CELF2O95319 508 aaKnown RBP15.04■□□□□ -0
CASC3-208ENST00000583649 ADARB2Q9NS39 739 aaKnown RBP15.04■□□□□ -0
CASC3-208ENST00000583649 CACNA1SQ13698 1873 aa15.03■□□□□ -0
CASC3-208ENST00000583649 MTHFSDQ2M296 383 aaKnown RBP15.03■□□□□ -0
CASC3-208ENST00000583649 NIM1KQ8IY84 436 aa15.03■□□□□ -0
CASC3-208ENST00000583649 GCC1Q96CN9 775 aa15.03■□□□□ -0
CASC3-208ENST00000583649 PANK3Q9H999 370 aa15.03■□□□□ -0
CASC3-208ENST00000583649 NIP7Q9Y221 180 aaKnown RBP eCLIP15.03■□□□□ -0
CASC3-208ENST00000583649 KNSTRNQ9Y448 316 aa15.03■□□□□ -0
CASC3-208ENST00000583649 TRAF5O00463 557 aa15.02■□□□□ -0
CASC3-208ENST00000583649 A1BGP04217 495 aa15.02■□□□□ -0
CASC3-208ENST00000583649 HMOX1P09601 288 aa15.02■□□□□ -0
CASC3-208ENST00000583649 EPS15P42566 896 aa15.02■□□□□ -0
CASC3-208ENST00000583649 NYXQ9GZU5 481 aa15.02■□□□□ -0
CASC3-208ENST00000583649 GNAT3A8MTJ3 354 aa15.01□□□□□ -0.01
CASC3-208ENST00000583649 SCNN1DP51172 638 aa15.01□□□□□ -0.01
CASC3-208ENST00000583649 CIAPIN1Q6FI81 312 aa15.01□□□□□ -0.01
CASC3-208ENST00000583649 GAS2L2Q8NHY3 880 aa15.01□□□□□ -0.01
CASC3-208ENST00000583649 RPGRQ92834 1020 aaKnown RBP15.01□□□□□ -0.01
CASC3-208ENST00000583649 NBPF15Q8N660 670 aa15□□□□□ -0.01
CASC3-208ENST00000583649 ZC3H15Q8WU90 426 aaKnown RBP15□□□□□ -0.01
CASC3-208ENST00000583649 VPS33BQ9H267 617 aa15□□□□□ -0.01
CASC3-208ENST00000583649 ZNF408Q9H9D4 720 aa15□□□□□ -0.01
CASC3-208ENST00000583649 SAGE1Q9NXZ1 904 aa15□□□□□ -0.01
CASC3-208ENST00000583649 UBR2Q8IWV8 1755 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms