RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 ERFEQ4G0M1 354 aa18.05■□□□□ 0.48
CCDC57-218ENST00000583593 COL13A1Q5TAT6 717 aaPredicted RBP18.05■□□□□ 0.48
CCDC57-218ENST00000583593 MCM10Q7L590 875 aa18.05■□□□□ 0.48
CCDC57-218ENST00000583593 STYK1Q6J9G0 422 aa18.04■□□□□ 0.48
CCDC57-218ENST00000583593 DPY19L2Q6NUT2 758 aa18.04■□□□□ 0.48
CCDC57-218ENST00000583593 PRPF40BQ6NWY9 871 aaKnown RBP18.04■□□□□ 0.48
CCDC57-218ENST00000583593 NPM2Q86SE8 214 aaKnown RBP18.04■□□□□ 0.48
CCDC57-218ENST00000583593 CFAP53Q96M91 514 aa18.04■□□□□ 0.48
CCDC57-218ENST00000583593 PPP2R1AP30153 589 aa18.03■□□□□ 0.48
CCDC57-218ENST00000583593 ST5P78524 1137 aa18.03■□□□□ 0.48
CCDC57-218ENST00000583593 DCTN1Q14203 1278 aa18.03■□□□□ 0.48
CCDC57-218ENST00000583593 CNKSR1Q969H4 720 aa18.03■□□□□ 0.48
CCDC57-218ENST00000583593 MASTLQ96GX5 879 aa18.03■□□□□ 0.48
CCDC57-218ENST00000583593 TAOK3Q9H2K8 898 aa18.03■□□□□ 0.48
CCDC57-218ENST00000583593 NBPF26B4DH59 902 aa18.02■□□□□ 0.48
CCDC57-218ENST00000583593 SNRPA1P09661 255 aaKnown RBP18.02■□□□□ 0.48
CCDC57-218ENST00000583593 U2AF1L5P0DN76 240 aaPredicted RBP18.02■□□□□ 0.48
CCDC57-218ENST00000583593 U2AF1Q01081 240 aaKnown RBP eCLIP18.02■□□□□ 0.48
CCDC57-218ENST00000583593 NBPF10Q6P3W6 841 aaKnown RBP18.02■□□□□ 0.48
CCDC57-218ENST00000583593 CLEC4GQ6UXB4 293 aa18.02■□□□□ 0.48
CCDC57-218ENST00000583593 NBPF15Q8N660 670 aa18.02■□□□□ 0.48
CCDC57-218ENST00000583593 C7orf43Q8WVR3 580 aa18.02■□□□□ 0.48
CCDC57-218ENST00000583593 NUDCQ9Y266 331 aa18.02■□□□□ 0.48
CCDC57-218ENST00000583593 DDNO94850 711 aaPredicted RBP18.01■□□□□ 0.47
CCDC57-218ENST00000583593 KLRG2A4D1S0 409 aaPredicted RBP18■□□□□ 0.47
CCDC57-218ENST00000583593 NPHP1O15259 732 aa18■□□□□ 0.47
CCDC57-218ENST00000583593 POTEIP0CG38 1075 aa18■□□□□ 0.47
CCDC57-218ENST00000583593 POTEJP0CG39 1038 aa18■□□□□ 0.47
CCDC57-218ENST00000583593 RTF1Q92541 710 aaKnown RBP18■□□□□ 0.47
CCDC57-218ENST00000583593 NBPF5PQ86XG9 351 aaPredicted RBP17.99■□□□□ 0.47
CCDC57-218ENST00000583593 HTATSF1O43719 755 aaKnown RBP17.98■□□□□ 0.47
CCDC57-218ENST00000583593 RGL2O15211 777 aa17.97■□□□□ 0.47
CCDC57-218ENST00000583593 HLFQ16534 295 aa17.97■□□□□ 0.47
CCDC57-218ENST00000583593 SOGA3Q5TF21 947 aa17.97■□□□□ 0.47
CCDC57-218ENST00000583593 MIS18AQ9NYP9 233 aa17.97■□□□□ 0.47
CCDC57-218ENST00000583593 NIP7Q9Y221 180 aaKnown RBP eCLIP17.97■□□□□ 0.47
CCDC57-218ENST00000583593 ZNF652Q9Y2D9 606 aa17.97■□□□□ 0.47
CCDC57-218ENST00000583593 DLG5Q8TDM6 1919 aa17.97■□□□□ 0.47
CCDC57-218ENST00000583593 LAMB4A4D0S4 1761 aa17.96■□□□□ 0.47
CCDC57-218ENST00000583593 HSPA1AP0DMV8 641 aaKnown RBP17.96■□□□□ 0.47
CCDC57-218ENST00000583593 HSPA1BP0DMV9 641 aaKnown RBP17.96■□□□□ 0.47
CCDC57-218ENST00000583593 NPR1P16066 1061 aa17.96■□□□□ 0.47
CCDC57-218ENST00000583593 TAF7Q15545 349 aaPredicted RBP17.96■□□□□ 0.47
CCDC57-218ENST00000583593 CHADLQ6NUI6 762 aa17.96■□□□□ 0.47
CCDC57-218ENST00000583593 OLFM4Q6UX06 510 aa17.96■□□□□ 0.47
CCDC57-218ENST00000583593 TPTE2Q6XPS3 522 aa17.96■□□□□ 0.47
CCDC57-218ENST00000583593 KDM3BQ7LBC6 1761 aa17.95■□□□□ 0.46
CCDC57-218ENST00000583593 FAM177BA6PVY3 158 aa17.95■□□□□ 0.46
CCDC57-218ENST00000583593 CCDC93Q567U6 631 aa17.95■□□□□ 0.46
CCDC57-218ENST00000583593 SCN4AP35499 1836 aa17.95■□□□□ 0.46
CCDC57-218ENST00000583593 FKBP4Q02790 459 aaKnown RBP eCLIP17.94■□□□□ 0.46
CCDC57-218ENST00000583593 L3MBTL3Q96JM7 780 aaPredicted RBP17.94■□□□□ 0.46
CCDC57-218ENST00000583593 ZNF277Q9NRM2 450 aaPredicted RBP17.93■□□□□ 0.46
CCDC57-218ENST00000583593 NUP98P52948 1817 aa17.93■□□□□ 0.46
CCDC57-218ENST00000583593 SNED1Q8TER0 1413 aa17.92■□□□□ 0.46
CCDC57-218ENST00000583593 TAF1DQ9H5J8 278 aaPredicted RBP17.92■□□□□ 0.46
CCDC57-218ENST00000583593 CREBZFQ9NS37 354 aa17.92■□□□□ 0.46
CCDC57-218ENST00000583593 PASKQ96RG2 1323 aa17.92■□□□□ 0.46
CCDC57-218ENST00000583593 ZNF541Q9H0D2 1346 aa17.92■□□□□ 0.46
CCDC57-218ENST00000583593 TNS4Q8IZW8 715 aa17.91■□□□□ 0.46
CCDC57-218ENST00000583593 PLEKHF1Q96S99 279 aa17.91■□□□□ 0.46
CCDC57-218ENST00000583593 ABCC12Q96J65 1359 aa17.91■□□□□ 0.46
CCDC57-218ENST00000583593 ADAMTSL1Q8N6G6 1762 aa17.9■□□□□ 0.46
CCDC57-218ENST00000583593 IQCA1LA6NCM1 817 aa17.9■□□□□ 0.46
CCDC57-218ENST00000583593 LDHDQ86WU2 507 aa17.9■□□□□ 0.46
CCDC57-218ENST00000583593 MKRN1Q9UHC7 482 aaKnown RBP17.9■□□□□ 0.46
CCDC57-218ENST00000583593 ALDH1B1P30837 517 aa17.89■□□□□ 0.45
CCDC57-218ENST00000583593 EIF4A1P60842 406 aaKnown RBP17.89■□□□□ 0.45
CCDC57-218ENST00000583593 TTLL7Q6ZT98 887 aa17.89■□□□□ 0.45
CCDC57-218ENST00000583593 NUTM1Q86Y26 1132 aa17.89■□□□□ 0.45
CCDC57-218ENST00000583593 RTKN2Q8IZC4 609 aa17.89■□□□□ 0.45
CCDC57-218ENST00000583593 SYNE4Q8N205 404 aa17.89■□□□□ 0.45
CCDC57-218ENST00000583593 NGEFQ8N5V2 710 aa17.89■□□□□ 0.45
CCDC57-218ENST00000583593 ERVV-1B6SEH8 477 aa17.88■□□□□ 0.45
CCDC57-218ENST00000583593 FZD9O00144 591 aa17.88■□□□□ 0.45
CCDC57-218ENST00000583593 ITGBL1O95965 494 aaPredicted RBP17.88■□□□□ 0.45
CCDC57-218ENST00000583593 IARSP41252 1262 aaKnown RBP17.88■□□□□ 0.45
CCDC57-218ENST00000583593 CRY2Q49AN0 593 aa17.88■□□□□ 0.45
CCDC57-218ENST00000583593 THUMPD2Q9BTF0 503 aaKnown RBP17.88■□□□□ 0.45
CCDC57-218ENST00000583593 MAP3K15Q6ZN16 1313 aa17.88■□□□□ 0.45
CCDC57-218ENST00000583593 COL4A5P29400 1685 aa17.87■□□□□ 0.45
CCDC57-218ENST00000583593 CAPN15O75808 1086 aa17.87■□□□□ 0.45
CCDC57-218ENST00000583593 PNISRQ8TF01 805 aaKnown RBP17.87■□□□□ 0.45
CCDC57-218ENST00000583593 RRP7AQ9Y3A4 280 aaKnown RBP17.87■□□□□ 0.45
CCDC57-218ENST00000583593 GTF2E1P29083 439 aaPredicted RBP17.86■□□□□ 0.45
CCDC57-218ENST00000583593 NYXQ9GZU5 481 aa17.86■□□□□ 0.45
CCDC57-218ENST00000583593 UBN2Q6ZU65 1347 aa17.86■□□□□ 0.45
CCDC57-218ENST00000583593 CNTNAP1P78357 1384 aa17.86■□□□□ 0.45
CCDC57-218ENST00000583593 NFE2L2Q16236 605 aa17.85■□□□□ 0.45
CCDC57-218ENST00000583593 SUSD4Q5VX71 490 aa17.85■□□□□ 0.45
CCDC57-218ENST00000583593 SLC51AQ86UW1 340 aa17.85■□□□□ 0.45
CCDC57-218ENST00000583593 PSMD1Q99460 953 aa17.85■□□□□ 0.45
CCDC57-218ENST00000583593 HACL1Q9UJ83 578 aa17.85■□□□□ 0.45
CCDC57-218ENST00000583593 RIC1Q4ADV7 1423 aa17.84■□□□□ 0.45
CCDC57-218ENST00000583593 RNF123Q5XPI4 1314 aa17.84■□□□□ 0.45
CCDC57-218ENST00000583593 MYL6BP14649 208 aa17.84■□□□□ 0.45
CCDC57-218ENST00000583593 GPTP24298 496 aa17.84■□□□□ 0.45
CCDC57-218ENST00000583593 HOXA10P31260 410 aaPredicted RBP17.84■□□□□ 0.45
CCDC57-218ENST00000583593 EPHX2P34913 555 aa17.84■□□□□ 0.45
CCDC57-218ENST00000583593 EAPPQ56P03 285 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms