RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 BCL2L12Q9HB09 334 aa31.5■■■□□ 2.63
MIR3960-201ENST00000583311 PARP3Q9Y6F1 533 aa31.5■■■□□ 2.63
MIR3960-201ENST00000583311 MAP3K15Q6ZN16 1313 aa31.49■■■□□ 2.63
MIR3960-201ENST00000583311 VAMP4O75379 141 aa31.47■■■□□ 2.63
MIR3960-201ENST00000583311 TM4SF1P30408 202 aa31.47■■■□□ 2.63
MIR3960-201ENST00000583311 COPS6Q7L5N1 327 aa31.47■■■□□ 2.63
MIR3960-201ENST00000583311 CDCA7LQ96GN5 454 aa31.47■■■□□ 2.63
MIR3960-201ENST00000583311 TTLL7Q6ZT98 887 aa31.46■■■□□ 2.63
MIR3960-201ENST00000583311 XAGE3Q8WTP9 111 aa31.46■■■□□ 2.63
MIR3960-201ENST00000583311 ZBED9Q6R2W3 1325 aa31.46■■■□□ 2.63
MIR3960-201ENST00000583311 AIMP1Q12904 312 aaKnown RBP31.45■■■□□ 2.63
MIR3960-201ENST00000583311 NFIXQ14938 502 aa31.45■■■□□ 2.63
MIR3960-201ENST00000583311 TRMT2AQ8IZ69 625 aaKnown RBP31.45■■■□□ 2.63
MIR3960-201ENST00000583311 SRCAPQ6ZRS2 3230 aa31.44■■■□□ 2.62
MIR3960-201ENST00000583311 TBC1D9BQ66K14 1250 aa31.43■■■□□ 2.62
MIR3960-201ENST00000583311 SETDB2Q96T68 719 aa31.43■■■□□ 2.62
MIR3960-201ENST00000583311 ZBTB3Q9H5J0 574 aa31.43■■■□□ 2.62
MIR3960-201ENST00000583311 POLRMTO00411 1230 aaKnown RBP31.41■■■□□ 2.62
MIR3960-201ENST00000583311 BICDL1Q6ZP65 573 aa31.41■■■□□ 2.62
MIR3960-201ENST00000583311 CARMIL3Q8ND23 1372 aa31.41■■■□□ 2.62
MIR3960-201ENST00000583311 DDR1Q08345 913 aa31.4■■■□□ 2.62
MIR3960-201ENST00000583311 HLFQ16534 295 aa31.4■■■□□ 2.62
MIR3960-201ENST00000583311 GIGYF2Q6Y7W6 1299 aaKnown RBP31.4■■■□□ 2.62
MIR3960-201ENST00000583311 KLHL34Q8N239 644 aa31.4■■■□□ 2.62
MIR3960-201ENST00000583311 FHDC1Q9C0D6 1143 aaPredicted RBP31.4■■■□□ 2.62
MIR3960-201ENST00000583311 DDX58O95786 925 aaKnown RBP31.38■■■□□ 2.61
MIR3960-201ENST00000583311 SLC4A2P04920 1241 aa31.38■■■□□ 2.61
MIR3960-201ENST00000583311 CT47B1P0C2W7 299 aaPredicted RBP31.38■■■□□ 2.61
MIR3960-201ENST00000583311 HSP90AB3PQ58FF7 597 aa31.38■■■□□ 2.61
MIR3960-201ENST00000583311 ANKRD13DQ6ZTN6 518 aa31.38■■■□□ 2.61
MIR3960-201ENST00000583311 PLBD2Q8NHP8 589 aa31.38■■■□□ 2.61
MIR3960-201ENST00000583311 ZNF428Q96B54 188 aa31.38■■■□□ 2.61
MIR3960-201ENST00000583311 NIP7Q9Y221 180 aaKnown RBP eCLIP31.38■■■□□ 2.61
MIR3960-201ENST00000583311 CD2APQ9Y5K6 639 aa31.38■■■□□ 2.61
MIR3960-201ENST00000583311 SERPINB2P05120 415 aa31.37■■■□□ 2.61
MIR3960-201ENST00000583311 PHAXQ9H814 394 aaKnown RBP31.37■■■□□ 2.61
MIR3960-201ENST00000583311 ATP10DQ9P241 1426 aa31.37■■■□□ 2.61
MIR3960-201ENST00000583311 TCERG1O14776 1098 aaKnown RBP31.36■■■□□ 2.61
MIR3960-201ENST00000583311 NUP98P52948 1817 aa31.35■■■□□ 2.61
MIR3960-201ENST00000583311 RIC3Q7Z5B4 369 aa31.34■■■□□ 2.61
MIR3960-201ENST00000583311 SYT17Q9BSW7 474 aa31.34■■■□□ 2.61
MIR3960-201ENST00000583311 CACNA1FO60840 1977 aa31.34■■■□□ 2.61
MIR3960-201ENST00000583311 NPHP1O15259 732 aa31.33■■■□□ 2.61
MIR3960-201ENST00000583311 NRXN2Q9P2S2 1712 aa31.32■■■□□ 2.6
MIR3960-201ENST00000583311 C10orf71Q711Q0 1435 aa31.32■■■□□ 2.6
MIR3960-201ENST00000583311 NBPF5PQ86XG9 351 aaPredicted RBP31.31■■■□□ 2.6
MIR3960-201ENST00000583311 TCIRG1Q13488 830 aa31.3■■■□□ 2.6
MIR3960-201ENST00000583311 PARP10Q53GL7 1025 aa31.3■■■□□ 2.6
MIR3960-201ENST00000583311 ZNF34Q8IZ26 560 aa31.3■■■□□ 2.6
MIR3960-201ENST00000583311 CNBD1Q8NA66 436 aa31.3■■■□□ 2.6
MIR3960-201ENST00000583311 NYXQ9GZU5 481 aa31.3■■■□□ 2.6
MIR3960-201ENST00000583311 AFDNP55196 1824 aaKnown RBP31.29■■■□□ 2.6
MIR3960-201ENST00000583311 GPTP24298 496 aa31.29■■■□□ 2.6
MIR3960-201ENST00000583311 FLIIQ13045 1269 aa31.29■■■□□ 2.6
MIR3960-201ENST00000583311 TPTE2Q6XPS3 522 aa31.29■■■□□ 2.6
MIR3960-201ENST00000583311 ST5P78524 1137 aa31.28■■■□□ 2.6
MIR3960-201ENST00000583311 KIF13BQ9NQT8 1826 aa31.27■■■□□ 2.6
MIR3960-201ENST00000583311 TGFB2P61812 414 aa31.27■■■□□ 2.6
MIR3960-201ENST00000583311 ALDH1L2Q3SY69 923 aa31.27■■■□□ 2.6
MIR3960-201ENST00000583311 KSR2Q6VAB6 950 aa31.27■■■□□ 2.6
MIR3960-201ENST00000583311 PPP1R42Q7Z4L9 355 aa31.27■■■□□ 2.6
MIR3960-201ENST00000583311 ANKRD36CQ5JPF3 1778 aa31.26■■■□□ 2.59
MIR3960-201ENST00000583311 ARFGEF2Q9Y6D5 1785 aa31.26■■■□□ 2.59
MIR3960-201ENST00000583311 FKBP5Q13451 457 aaPredicted RBP31.26■■■□□ 2.59
MIR3960-201ENST00000583311 PRR5LQ6MZQ0 368 aa31.26■■■□□ 2.59
MIR3960-201ENST00000583311 G2E3Q7L622 706 aa31.26■■■□□ 2.59
MIR3960-201ENST00000583311 IBTKQ9P2D0 1353 aaPredicted RBP31.26■■■□□ 2.59
MIR3960-201ENST00000583311 GTF2E1P29083 439 aaPredicted RBP31.25■■■□□ 2.59
MIR3960-201ENST00000583311 UBN2Q6ZU65 1347 aa31.24■■■□□ 2.59
MIR3960-201ENST00000583311 PI4KAP2A4QPH2 592 aa31.24■■■□□ 2.59
MIR3960-201ENST00000583311 PI4KAP1Q8N8J0 262 aa31.24■■■□□ 2.59
MIR3960-201ENST00000583311 FAM177BA6PVY3 158 aa31.23■■■□□ 2.59
MIR3960-201ENST00000583311 MAP3K2Q9Y2U5 619 aa31.23■■■□□ 2.59
MIR3960-201ENST00000583311 NEXNQ0ZGT2 675 aa31.22■■■□□ 2.59
MIR3960-201ENST00000583311 NLGN2Q8NFZ4 835 aa31.22■■■□□ 2.59
MIR3960-201ENST00000583311 SSH1Q8WYL5 1049 aa31.22■■■□□ 2.59
MIR3960-201ENST00000583311 METTL22Q9BUU2 404 aaPredicted RBP31.22■■■□□ 2.59
MIR3960-201ENST00000583311 BRIP1Q9BX63 1249 aa31.22■■■□□ 2.59
MIR3960-201ENST00000583311 PDZRN3Q9UPQ7 1066 aa31.22■■■□□ 2.59
MIR3960-201ENST00000583311 RNF123Q5XPI4 1314 aa31.22■■■□□ 2.59
MIR3960-201ENST00000583311 TRIM28Q13263 835 aaKnown RBP31.21■■■□□ 2.59
MIR3960-201ENST00000583311 SUSD4Q5VX71 490 aa31.21■■■□□ 2.59
MIR3960-201ENST00000583311 NLRP10Q86W26 655 aa31.21■■■□□ 2.59
MIR3960-201ENST00000583311 MRPL50Q8N5N7 158 aaKnown RBP31.21■■■□□ 2.59
MIR3960-201ENST00000583311 ISCA1Q9BUE6 129 aa31.21■■■□□ 2.59
MIR3960-201ENST00000583311 UTP14AQ9BVJ6 771 aaKnown RBP31.21■■■□□ 2.59
MIR3960-201ENST00000583311 ADCY9O60503 1353 aa31.2■■■□□ 2.59
MIR3960-201ENST00000583311 PDE6BP35913 854 aa31.2■■■□□ 2.59
MIR3960-201ENST00000583311 MYD88Q99836 296 aa31.2■■■□□ 2.59
MIR3960-201ENST00000583311 SMC4Q9NTJ3 1288 aa31.2■■■□□ 2.59
MIR3960-201ENST00000583311 DCAF8L1A6NGE4 600 aa31.19■■■□□ 2.58
MIR3960-201ENST00000583311 ATP5J2-PTCD1G3V325 749 aa31.18■■■□□ 2.58
MIR3960-201ENST00000583311 NTSR2O95665 410 aa31.18■■■□□ 2.58
MIR3960-201ENST00000583311 PXDNLA1KZ92 1463 aa31.18■■■□□ 2.58
MIR3960-201ENST00000583311 DNAAF4Q8WXU2 420 aa31.17■■■□□ 2.58
MIR3960-201ENST00000583311 PTPRCP08575 1304 aa31.17■■■□□ 2.58
MIR3960-201ENST00000583311 CCDC191Q8NCU4 936 aa31.16■■■□□ 2.58
MIR3960-201ENST00000583311 BCL2L13Q9BXK5 485 aa31.16■■■□□ 2.58
MIR3960-201ENST00000583311 TRMT112Q9UI30 125 aaKnown RBP31.16■■■□□ 2.58
MIR3960-201ENST00000583311 RARSP54136 660 aaKnown RBP31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms