RNA–Protein interactions for RNA: ENST00000583213.1

TNFAIP1-206, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-206ENST00000583213 NPM2Q86SE8 214 aaKnown RBP21.42■■□□□ 1.02
TNFAIP1-206ENST00000583213 C16orf71Q8IYS4 520 aaPredicted RBP21.42■■□□□ 1.02
TNFAIP1-206ENST00000583213 NBPF15Q8N660 670 aa21.42■■□□□ 1.02
TNFAIP1-206ENST00000583213 PLEKHF1Q96S99 279 aa21.42■■□□□ 1.02
TNFAIP1-206ENST00000583213 RRAGCQ9HB90 399 aa21.42■■□□□ 1.02
TNFAIP1-206ENST00000583213 SLX4Q8IY92 1834 aa21.41■■□□□ 1.02
TNFAIP1-206ENST00000583213 SRGNP10124 158 aa21.41■■□□□ 1.02
TNFAIP1-206ENST00000583213 TAF7Q15545 349 aaPredicted RBP21.41■■□□□ 1.02
TNFAIP1-206ENST00000583213 KLRG2A4D1S0 409 aaPredicted RBP21.4■■□□□ 1.02
TNFAIP1-206ENST00000583213 PIP4K2AP48426 406 aaPredicted RBP21.4■■□□□ 1.02
TNFAIP1-206ENST00000583213 ST5P78524 1137 aa21.4■■□□□ 1.02
TNFAIP1-206ENST00000583213 ZNF622Q969S3 477 aaKnown RBP eCLIP21.4■■□□□ 1.02
TNFAIP1-206ENST00000583213 CCDC24Q8N4L8 307 aa21.39■■□□□ 1.01
TNFAIP1-206ENST00000583213 CNKSR1Q969H4 720 aa21.39■■□□□ 1.01
TNFAIP1-206ENST00000583213 ZNF652Q9Y2D9 606 aa21.39■■□□□ 1.01
TNFAIP1-206ENST00000583213 C21orf2O43822 256 aa21.38■■□□□ 1.01
TNFAIP1-206ENST00000583213 IFFO2Q5TF58 517 aa21.38■■□□□ 1.01
TNFAIP1-206ENST00000583213 MASTLQ96GX5 879 aa21.38■■□□□ 1.01
TNFAIP1-206ENST00000583213 CACNA1SQ13698 1873 aa21.37■■□□□ 1.01
TNFAIP1-206ENST00000583213 VEGFAP15692 232 aaPredicted RBP21.37■■□□□ 1.01
TNFAIP1-206ENST00000583213 PRPF40BQ6NWY9 871 aaKnown RBP21.37■■□□□ 1.01
TNFAIP1-206ENST00000583213 SMC1BQ8NDV3 1235 aa21.37■■□□□ 1.01
TNFAIP1-206ENST00000583213 SOGA3Q5TF21 947 aa21.36■■□□□ 1.01
TNFAIP1-206ENST00000583213 NBPF5PQ86XG9 351 aaPredicted RBP21.36■■□□□ 1.01
TNFAIP1-206ENST00000583213 PNISRQ8TF01 805 aaKnown RBP21.36■■□□□ 1.01
TNFAIP1-206ENST00000583213 C7orf43Q8WVR3 580 aa21.36■■□□□ 1.01
TNFAIP1-206ENST00000583213 POTECB2RU33 542 aa21.35■■□□□ 1.01
TNFAIP1-206ENST00000583213 TAOK3Q9H2K8 898 aa21.35■■□□□ 1.01
TNFAIP1-206ENST00000583213 NFE2L2Q16236 605 aa21.34■■□□□ 1.01
TNFAIP1-206ENST00000583213 JMYQ8N9B5 988 aa21.33■■□□□ 1.01
TNFAIP1-206ENST00000583213 MIS18AQ9NYP9 233 aa21.33■■□□□ 1.01
TNFAIP1-206ENST00000583213 NPHP1O15259 732 aa21.32■■□□□ 1
TNFAIP1-206ENST00000583213 NEFMP07197 916 aa21.32■■□□□ 1
TNFAIP1-206ENST00000583213 NPR1P16066 1061 aa21.32■■□□□ 1
TNFAIP1-206ENST00000583213 EIF4A1P60842 406 aaKnown RBP21.32■■□□□ 1
TNFAIP1-206ENST00000583213 ERFEQ4G0M1 354 aa21.32■■□□□ 1
TNFAIP1-206ENST00000583213 TPTE2Q6XPS3 522 aa21.32■■□□□ 1
TNFAIP1-206ENST00000583213 KLRG1Q96E93 195 aa21.32■■□□□ 1
TNFAIP1-206ENST00000583213 NIP7Q9Y221 180 aaKnown RBP eCLIP21.32■■□□□ 1
TNFAIP1-206ENST00000583213 NUP98P52948 1817 aa21.32■■□□□ 1
TNFAIP1-206ENST00000583213 RIC1Q4ADV7 1423 aa21.31■■□□□ 1
TNFAIP1-206ENST00000583213 ERVV-1B6SEH8 477 aa21.31■■□□□ 1
TNFAIP1-206ENST00000583213 HLFQ16534 295 aa21.31■■□□□ 1
TNFAIP1-206ENST00000583213 SNED1Q8TER0 1413 aa21.3■■□□□ 1
TNFAIP1-206ENST00000583213 DPY19L2Q6NUT2 758 aa21.3■■□□□ 1
TNFAIP1-206ENST00000583213 PNNQ9H307 717 aaKnown RBP21.3■■□□□ 1
TNFAIP1-206ENST00000583213 ZNF219Q9P2Y4 722 aaPredicted RBP21.3■■□□□ 1
TNFAIP1-206ENST00000583213 IBTKQ9P2D0 1353 aaPredicted RBP21.3■■□□□ 1
TNFAIP1-206ENST00000583213 PCNTO95613 3336 aa21.3■■□□□ 1
TNFAIP1-206ENST00000583213 HTRA3P83110 453 aa21.29■■□□□ 1
TNFAIP1-206ENST00000583213 ERBB4Q15303 1308 aa21.29■■□□□ 1
TNFAIP1-206ENST00000583213 CRY2Q49AN0 593 aa21.28■■□□□ 1
TNFAIP1-206ENST00000583213 CCDC93Q567U6 631 aa21.28■■□□□ 1
TNFAIP1-206ENST00000583213 THUMPD2Q9BTF0 503 aaKnown RBP21.28■■□□□ 1
TNFAIP1-206ENST00000583213 MAP3K15Q6ZN16 1313 aa21.28■■□□□ 1
TNFAIP1-206ENST00000583213 ABCC12Q96J65 1359 aa21.26■□□□□ 0.99
TNFAIP1-206ENST00000583213 RALBP1Q15311 655 aa21.26■□□□□ 0.99
TNFAIP1-206ENST00000583213 MAPK8IP3Q9UPT6 1336 aa21.26■□□□□ 0.99
TNFAIP1-206ENST00000583213 SCN4AP35499 1836 aa21.25■□□□□ 0.99
TNFAIP1-206ENST00000583213 FKBP4Q02790 459 aaKnown RBP eCLIP21.25■□□□□ 0.99
TNFAIP1-206ENST00000583213 LRP10Q7Z4F1 713 aa21.25■□□□□ 0.99
TNFAIP1-206ENST00000583213 L3MBTL3Q96JM7 780 aaPredicted RBP21.25■□□□□ 0.99
TNFAIP1-206ENST00000583213 NYXQ9GZU5 481 aa21.25■□□□□ 0.99
TNFAIP1-206ENST00000583213 TTLL7Q6ZT98 887 aa21.24■□□□□ 0.99
TNFAIP1-206ENST00000583213 BABAM1Q9NWV8 329 aa21.24■□□□□ 0.99
TNFAIP1-206ENST00000583213 ALDH1B1P30837 517 aa21.23■□□□□ 0.99
TNFAIP1-206ENST00000583213 RTKN2Q8IZC4 609 aa21.23■□□□□ 0.99
TNFAIP1-206ENST00000583213 UBN2Q6ZU65 1347 aa21.23■□□□□ 0.99
TNFAIP1-206ENST00000583213 DDNO94850 711 aaPredicted RBP21.22■□□□□ 0.99
TNFAIP1-206ENST00000583213 HOXA10P31260 410 aaPredicted RBP21.22■□□□□ 0.99
TNFAIP1-206ENST00000583213 KIF6Q6ZMV9 814 aa21.22■□□□□ 0.99
TNFAIP1-206ENST00000583213 ZNF34Q8IZ26 560 aa21.22■□□□□ 0.99
TNFAIP1-206ENST00000583213 RRP7AQ9Y3A4 280 aaKnown RBP21.21■□□□□ 0.99
TNFAIP1-206ENST00000583213 FAM177BA6PVY3 158 aa21.2■□□□□ 0.98
TNFAIP1-206ENST00000583213 PDIA6Q15084 440 aa21.2■□□□□ 0.98
TNFAIP1-206ENST00000583213 OLFM4Q6UX06 510 aa21.2■□□□□ 0.98
TNFAIP1-206ENST00000583213 GIGYF2Q6Y7W6 1299 aaKnown RBP21.2■□□□□ 0.98
TNFAIP1-206ENST00000583213 ADAMTSL1Q8N6G6 1762 aa21.2■□□□□ 0.98
TNFAIP1-206ENST00000583213 IQCA1LA6NCM1 817 aa21.19■□□□□ 0.98
TNFAIP1-206ENST00000583213 NTSR2O95665 410 aa21.19■□□□□ 0.98
TNFAIP1-206ENST00000583213 CHADLQ6NUI6 762 aa21.19■□□□□ 0.98
TNFAIP1-206ENST00000583213 NUTM1Q86Y26 1132 aa21.19■□□□□ 0.98
TNFAIP1-206ENST00000583213 NGEFQ8N5V2 710 aa21.19■□□□□ 0.98
TNFAIP1-206ENST00000583213 PSMD1Q99460 953 aa21.19■□□□□ 0.98
TNFAIP1-206ENST00000583213 ZNF277Q9NRM2 450 aaPredicted RBP21.19■□□□□ 0.98
TNFAIP1-206ENST00000583213 TSPYL4Q9UJ04 414 aa21.19■□□□□ 0.98
TNFAIP1-206ENST00000583213 MYL6BP14649 208 aa21.18■□□□□ 0.98
TNFAIP1-206ENST00000583213 GTF2E1P29083 439 aaPredicted RBP21.18■□□□□ 0.98
TNFAIP1-206ENST00000583213 TMPOP42166 694 aaKnown RBP21.18■□□□□ 0.98
TNFAIP1-206ENST00000583213 RIPK4P57078 832 aa21.18■□□□□ 0.98
TNFAIP1-206ENST00000583213 SUSD4Q5VX71 490 aa21.18■□□□□ 0.98
TNFAIP1-206ENST00000583213 CC2D2BQ6DHV5 1058 aa21.18■□□□□ 0.98
TNFAIP1-206ENST00000583213 ZBTB3Q9H5J0 574 aa21.18■□□□□ 0.98
TNFAIP1-206ENST00000583213 ZNF541Q9H0D2 1346 aa21.18■□□□□ 0.98
TNFAIP1-206ENST00000583213 FZD9O00144 591 aa21.17■□□□□ 0.98
TNFAIP1-206ENST00000583213 LMOD3Q0VAK6 560 aa21.17■□□□□ 0.98
TNFAIP1-206ENST00000583213 TAF1DQ9H5J8 278 aaPredicted RBP21.17■□□□□ 0.98
TNFAIP1-206ENST00000583213 ANKRD36CQ5JPF3 1778 aa21.16■□□□□ 0.98
TNFAIP1-206ENST00000583213 MYBBP1AQ9BQG0 1328 aaKnown RBP21.16■□□□□ 0.98
TNFAIP1-206ENST00000583213 POTEIP0CG38 1075 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms