RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 RUFY3Q7L099 469 aa12.55□□□□□ -0.4
TOP3A-214ENST00000582981 AMOTL2Q9Y2J4 779 aa12.55□□□□□ -0.4
TOP3A-214ENST00000582981 NDUFB9Q9Y6M9 179 aa12.55□□□□□ -0.4
TOP3A-214ENST00000582981 KIF24Q5T7B8 1368 aa12.55□□□□□ -0.4
TOP3A-214ENST00000582981 SYT1P21579 422 aa12.55□□□□□ -0.4
TOP3A-214ENST00000582981 LMOD2Q6P5Q4 547 aa12.55□□□□□ -0.4
TOP3A-214ENST00000582981 ZBTB9Q96C00 473 aa12.55□□□□□ -0.4
TOP3A-214ENST00000582981 FEZ1Q99689 392 aa12.55□□□□□ -0.4
TOP3A-214ENST00000582981 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.55□□□□□ -0.4
TOP3A-214ENST00000582981 AIMP1Q12904 312 aaKnown RBP12.54□□□□□ -0.4
TOP3A-214ENST00000582981 STK3Q13188 491 aa12.54□□□□□ -0.4
TOP3A-214ENST00000582981 ABTB2Q8N961 1025 aa12.54□□□□□ -0.4
TOP3A-214ENST00000582981 LRRC59Q96AG4 307 aaKnown RBP12.54□□□□□ -0.4
TOP3A-214ENST00000582981 TIGD1Q96MW7 591 aa12.54□□□□□ -0.4
TOP3A-214ENST00000582981 CWF19L2Q2TBE0 894 aaKnown RBP12.54□□□□□ -0.4
TOP3A-214ENST00000582981 MPRIPQ6WCQ1 1025 aa12.54□□□□□ -0.4
TOP3A-214ENST00000582981 KLHDC4Q8TBB5 520 aa12.54□□□□□ -0.4
TOP3A-214ENST00000582981 JAKMIP1Q96N16 626 aaKnown RBP12.54□□□□□ -0.4
TOP3A-214ENST00000582981 TRIM34Q9BYJ4 488 aa12.54□□□□□ -0.4
TOP3A-214ENST00000582981 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
TOP3A-214ENST00000582981 PYCARDQ9ULZ3 195 aa12.54□□□□□ -0.4
TOP3A-214ENST00000582981 CHGBP05060 677 aa12.54□□□□□ -0.4
TOP3A-214ENST00000582981 SMC3Q9UQE7 1217 aa12.54□□□□□ -0.4
TOP3A-214ENST00000582981 USP6P35125 1406 aa12.54□□□□□ -0.4
TOP3A-214ENST00000582981 RPAP1Q9BWH6 1393 aaPredicted RBP12.53□□□□□ -0.4
TOP3A-214ENST00000582981 PEAK1Q9H792 1746 aa12.53□□□□□ -0.4
TOP3A-214ENST00000582981 DIP2BQ9P265 1576 aa12.53□□□□□ -0.4
TOP3A-214ENST00000582981 PIP4K2AP48426 406 aaPredicted RBP12.53□□□□□ -0.4
TOP3A-214ENST00000582981 PI4K2BQ8TCG2 481 aa12.53□□□□□ -0.4
TOP3A-214ENST00000582981 TAF6LQ9Y6J9 622 aa12.53□□□□□ -0.4
TOP3A-214ENST00000582981 ANKRD7Q92527 254 aa12.53□□□□□ -0.4
TOP3A-214ENST00000582981 OVOS2A0A0J9YW53 1432 aa12.53□□□□□ -0.4
TOP3A-214ENST00000582981 OVOS2Q6IE36 1432 aa12.53□□□□□ -0.4
TOP3A-214ENST00000582981 HSPA4P34932 840 aa12.52□□□□□ -0.4
TOP3A-214ENST00000582981 PROSER3Q2NL68 480 aa12.52□□□□□ -0.4
TOP3A-214ENST00000582981 EDC3Q96F86 508 aaKnown RBP12.52□□□□□ -0.4
TOP3A-214ENST00000582981 ZFP91Q96JP5 570 aaPredicted RBP12.52□□□□□ -0.4
TOP3A-214ENST00000582981 C16orf45Q96MC5 204 aaPredicted RBP12.52□□□□□ -0.4
TOP3A-214ENST00000582981 DNAJC2Q99543 621 aaKnown RBP12.52□□□□□ -0.4
TOP3A-214ENST00000582981 CCDC8Q9H0W5 538 aaPredicted RBP12.52□□□□□ -0.4
TOP3A-214ENST00000582981 STX6O43752 255 aa12.52□□□□□ -0.41
TOP3A-214ENST00000582981 PHF14O94880 888 aa12.52□□□□□ -0.41
TOP3A-214ENST00000582981 SLFN14P0C7P3 912 aa12.52□□□□□ -0.41
TOP3A-214ENST00000582981 GJB2P29033 226 aa12.52□□□□□ -0.41
TOP3A-214ENST00000582981 NCBP1Q09161 790 aaKnown RBP12.52□□□□□ -0.41
TOP3A-214ENST00000582981 WDR33Q9C0J8 1336 aaKnown RBP12.52□□□□□ -0.41
TOP3A-214ENST00000582981 SGSM2O43147 1006 aa12.52□□□□□ -0.41
TOP3A-214ENST00000582981 AP5Z1O43299 807 aa12.52□□□□□ -0.41
TOP3A-214ENST00000582981 ZNF592Q92610 1267 aa12.52□□□□□ -0.41
TOP3A-214ENST00000582981 FAM227BQ96M60 508 aa12.52□□□□□ -0.41
TOP3A-214ENST00000582981 HOXC9P31274 260 aa12.51□□□□□ -0.41
TOP3A-214ENST00000582981 CKAP2LQ8IYA6 745 aa12.51□□□□□ -0.41
TOP3A-214ENST00000582981 FLT4P35916 1363 aa12.51□□□□□ -0.41
TOP3A-214ENST00000582981 GABPB1Q06547 395 aaPredicted RBP12.51□□□□□ -0.41
TOP3A-214ENST00000582981 SPTLC3Q9NUV7 552 aa12.51□□□□□ -0.41
TOP3A-214ENST00000582981 TFIP11Q9UBB9 837 aaKnown RBP12.51□□□□□ -0.41
TOP3A-214ENST00000582981 ZSCAN22P10073 491 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-214ENST00000582981 IRX3P78415 501 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-214ENST00000582981 LSG1Q9H089 658 aaKnown RBP12.5□□□□□ -0.41
TOP3A-214ENST00000582981 MCM2P49736 904 aa12.5□□□□□ -0.41
TOP3A-214ENST00000582981 RAD50Q92878 1312 aa12.5□□□□□ -0.41
TOP3A-214ENST00000582981 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.5□□□□□ -0.41
TOP3A-214ENST00000582981 CTNNA3Q9UI47 895 aa12.5□□□□□ -0.41
TOP3A-214ENST00000582981 V9GYY5 206 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-214ENST00000582981 NRXN3Q9Y4C0 1643 aa12.5□□□□□ -0.41
TOP3A-214ENST00000582981 IGSF1Q8N6C5 1336 aa12.5□□□□□ -0.41
TOP3A-214ENST00000582981 A0A087WWV3 80 aa12.5□□□□□ -0.41
TOP3A-214ENST00000582981 TLR7Q9NYK1 1049 aaKnown RBP12.5□□□□□ -0.41
TOP3A-214ENST00000582981 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
TOP3A-214ENST00000582981 KIAA1524Q8TCG1 905 aa12.49□□□□□ -0.41
TOP3A-214ENST00000582981 SSH3Q8TE77 659 aa12.49□□□□□ -0.41
TOP3A-214ENST00000582981 C9orf78Q9NZ63 289 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-214ENST00000582981 NPHP1O15259 732 aa12.49□□□□□ -0.41
TOP3A-214ENST00000582981 F13A1P00488 732 aa12.49□□□□□ -0.41
TOP3A-214ENST00000582981 CEBPZQ03701 1054 aaKnown RBP12.49□□□□□ -0.41
TOP3A-214ENST00000582981 TERF2Q15554 542 aa12.49□□□□□ -0.41
TOP3A-214ENST00000582981 CNTROBQ8N137 903 aa12.49□□□□□ -0.41
TOP3A-214ENST00000582981 FBXW7Q969H0 707 aa12.49□□□□□ -0.41
TOP3A-214ENST00000582981 BOLA2Q9H3K6 86 aa12.49□□□□□ -0.41
TOP3A-214ENST00000582981 TNNT3P45378 269 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-214ENST00000582981 AACSQ86V21 672 aa12.49□□□□□ -0.41
TOP3A-214ENST00000582981 FAM184AQ8NB25 1140 aa12.49□□□□□ -0.41
TOP3A-214ENST00000582981 INTS4Q96HW7 963 aaKnown RBP12.49□□□□□ -0.41
TOP3A-214ENST00000582981 STAP2Q9UGK3 403 aa12.49□□□□□ -0.41
TOP3A-214ENST00000582981 ST3GAL1Q11201 340 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 NBPF6Q5VWK0 638 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 DNAAF4Q8WXU2 420 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 DDX11Q96FC9 970 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 NBPF4Q96M43 638 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 LRRC2Q9BYS8 371 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 PDRG1Q9NUG6 133 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 LIMCH1Q9UPQ0 1083 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 C3P01024 1663 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 TNRQ92752 1358 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 ANAPC15P60006 121 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 ME3Q16798 604 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 CCDC183Q5T5S1 534 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 DRC7Q8IY82 874 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 KIF1BPQ96EK5 621 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 KCNF1Q9H3M0 494 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms