RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 AIMP1Q12904 312 aaKnown RBP12.2□□□□□ -0.46
TRAPPC8-211ENST00000582539 TTF1Q15361 905 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC8-211ENST00000582539 PLEKHM2Q8IWE5 1019 aa12.2□□□□□ -0.46
TRAPPC8-211ENST00000582539 C1orf115Q9H7X2 142 aa12.2□□□□□ -0.46
TRAPPC8-211ENST00000582539 NT5C2P49902 561 aa12.2□□□□□ -0.46
TRAPPC8-211ENST00000582539 DDX54Q8TDD1 881 aaKnown RBP12.2□□□□□ -0.46
TRAPPC8-211ENST00000582539 MYD88Q99836 296 aa12.2□□□□□ -0.46
TRAPPC8-211ENST00000582539 SH2B1Q9NRF2 756 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC8-211ENST00000582539 TBC1D2BQ9UPU7 963 aa12.2□□□□□ -0.46
TRAPPC8-211ENST00000582539 DLG5Q8TDM6 1919 aa12.2□□□□□ -0.46
TRAPPC8-211ENST00000582539 RGPD8O14715 1765 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC8-211ENST00000582539 FGD1P98174 961 aa12.19□□□□□ -0.46
TRAPPC8-211ENST00000582539 DDB1Q16531 1140 aa12.19□□□□□ -0.46
TRAPPC8-211ENST00000582539 XAGE3Q8WTP9 111 aa12.19□□□□□ -0.46
TRAPPC8-211ENST00000582539 ARXQ96QS3 562 aa12.19□□□□□ -0.46
TRAPPC8-211ENST00000582539 APBB1O00213 710 aa12.19□□□□□ -0.46
TRAPPC8-211ENST00000582539 ABCC12Q96J65 1359 aa12.19□□□□□ -0.46
TRAPPC8-211ENST00000582539 UQCRFS1P1P0C7P4 283 aa12.19□□□□□ -0.46
TRAPPC8-211ENST00000582539 POLA2Q14181 598 aa12.19□□□□□ -0.46
TRAPPC8-211ENST00000582539 ANO2Q9NQ90 1003 aa12.19□□□□□ -0.46
TRAPPC8-211ENST00000582539 CHRNA2Q15822 529 aa12.18□□□□□ -0.46
TRAPPC8-211ENST00000582539 CPLX2Q6PUV4 134 aaKnown RBP12.18□□□□□ -0.46
TRAPPC8-211ENST00000582539 NFATC2IPQ8NCF5 419 aa12.18□□□□□ -0.46
TRAPPC8-211ENST00000582539 CDC5LQ99459 802 aaKnown RBP12.18□□□□□ -0.46
TRAPPC8-211ENST00000582539 COL14A1Q05707 1796 aaKnown RBP12.18□□□□□ -0.46
TRAPPC8-211ENST00000582539 ERVV-1B6SEH8 477 aa12.18□□□□□ -0.46
TRAPPC8-211ENST00000582539 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC8-211ENST00000582539 MRC1P22897 1456 aa12.18□□□□□ -0.46
TRAPPC8-211ENST00000582539 UTYO14607 1347 aa12.18□□□□□ -0.46
TRAPPC8-211ENST00000582539 SPATA31A6Q5VVP1 1343 aa12.18□□□□□ -0.46
TRAPPC8-211ENST00000582539 F6X3S4 739 aa12.18□□□□□ -0.46
TRAPPC8-211ENST00000582539 TBC1D9Q6ZT07 1266 aa12.18□□□□□ -0.46
TRAPPC8-211ENST00000582539 LGR6Q9HBX8 967 aa12.18□□□□□ -0.46
TRAPPC8-211ENST00000582539 CIAO1O76071 339 aa12.17□□□□□ -0.46
TRAPPC8-211ENST00000582539 COPS6Q7L5N1 327 aa12.17□□□□□ -0.46
TRAPPC8-211ENST00000582539 AACSQ86V21 672 aa12.17□□□□□ -0.46
TRAPPC8-211ENST00000582539 FSD1Q9BTV5 496 aa12.17□□□□□ -0.46
TRAPPC8-211ENST00000582539 NYXQ9GZU5 481 aa12.17□□□□□ -0.46
TRAPPC8-211ENST00000582539 A0A0G2JS52 829 aa12.17□□□□□ -0.46
TRAPPC8-211ENST00000582539 RBM42Q9BTD8 480 aaKnown RBP12.17□□□□□ -0.46
TRAPPC8-211ENST00000582539 ZNF335Q9H4Z2 1342 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC8-211ENST00000582539 TRIM28Q13263 835 aaKnown RBP12.17□□□□□ -0.46
TRAPPC8-211ENST00000582539 ANKRD18BA2A2Z9 1011 aa12.16□□□□□ -0.46
TRAPPC8-211ENST00000582539 NPHP1O15259 732 aa12.16□□□□□ -0.46
TRAPPC8-211ENST00000582539 COPRSQ9NQ92 184 aa12.16□□□□□ -0.46
TRAPPC8-211ENST00000582539 USP42Q9H9J4 1324 aaKnown RBP12.16□□□□□ -0.46
TRAPPC8-211ENST00000582539 MBD3O95983 291 aa12.16□□□□□ -0.46
TRAPPC8-211ENST00000582539 IFIT5Q13325 482 aaKnown RBP12.16□□□□□ -0.46
TRAPPC8-211ENST00000582539 GCKRQ14397 625 aa12.16□□□□□ -0.46
TRAPPC8-211ENST00000582539 RBM33Q96EV2 1170 aaKnown RBP12.16□□□□□ -0.46
TRAPPC8-211ENST00000582539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRAPPC8-211ENST00000582539 USP44Q9H0E7 712 aa12.16□□□□□ -0.46
TRAPPC8-211ENST00000582539 BTG4Q9NY30 223 aa12.16□□□□□ -0.46
TRAPPC8-211ENST00000582539 DHX16O60231 1041 aaKnown RBP12.15□□□□□ -0.46
TRAPPC8-211ENST00000582539 MYL6BP14649 208 aa12.15□□□□□ -0.46
TRAPPC8-211ENST00000582539 JCADQ9P266 1359 aa12.15□□□□□ -0.46
TRAPPC8-211ENST00000582539 AHDC1Q5TGY3 1603 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC8-211ENST00000582539 GTF2E1P29083 439 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC8-211ENST00000582539 BARGINQ6ZT62 677 aa12.15□□□□□ -0.46
TRAPPC8-211ENST00000582539 CCDC34Q96HJ3 373 aa12.15□□□□□ -0.46
TRAPPC8-211ENST00000582539 COL5A2P05997 1499 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC8-211ENST00000582539 LETM1O95202 739 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC8-211ENST00000582539 CYP46A1Q9Y6A2 500 aa12.15□□□□□ -0.46
TRAPPC8-211ENST00000582539 IL6STP40189 918 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC8-211ENST00000582539 G2E3Q7L622 706 aa12.14□□□□□ -0.47
TRAPPC8-211ENST00000582539 INTS4Q96HW7 963 aaKnown RBP12.14□□□□□ -0.47
TRAPPC8-211ENST00000582539 ESYT1Q9BSJ8 1104 aa12.14□□□□□ -0.47
TRAPPC8-211ENST00000582539 NEURL1BA8MQ27 555 aa12.14□□□□□ -0.47
TRAPPC8-211ENST00000582539 IGHMBP2P38935 993 aaKnown RBP12.14□□□□□ -0.47
TRAPPC8-211ENST00000582539 EXOC6BQ9Y2D4 811 aa12.14□□□□□ -0.47
TRAPPC8-211ENST00000582539 TTC39AQ5SRH9 613 aa12.14□□□□□ -0.47
TRAPPC8-211ENST00000582539 CERS3Q8IU89 383 aa12.14□□□□□ -0.47
TRAPPC8-211ENST00000582539 PCCAP05165 728 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC8-211ENST00000582539 AMOTL1Q8IY63 956 aa12.14□□□□□ -0.47
TRAPPC8-211ENST00000582539 BCL11AQ9H165 835 aa12.14□□□□□ -0.47
TRAPPC8-211ENST00000582539 SDSP20132 328 aa12.13□□□□□ -0.47
TRAPPC8-211ENST00000582539 TRDNQ13061 729 aa12.13□□□□□ -0.47
TRAPPC8-211ENST00000582539 ZNF496Q96IT1 587 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC8-211ENST00000582539 CDHR2Q9BYE9 1310 aa12.13□□□□□ -0.47
TRAPPC8-211ENST00000582539 WDR33Q9C0J8 1336 aaKnown RBP12.13□□□□□ -0.47
TRAPPC8-211ENST00000582539 IFIT1P09914 478 aaKnown RBP12.13□□□□□ -0.47
TRAPPC8-211ENST00000582539 VIRMAQ69YN4 1812 aaKnown RBP12.12□□□□□ -0.47
TRAPPC8-211ENST00000582539 SLC5A1P13866 664 aa12.12□□□□□ -0.47
TRAPPC8-211ENST00000582539 TCIRG1Q13488 830 aa12.12□□□□□ -0.47
TRAPPC8-211ENST00000582539 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
TRAPPC8-211ENST00000582539 TM6SF1Q9BZW5 370 aa12.12□□□□□ -0.47
TRAPPC8-211ENST00000582539 KDM3BQ7LBC6 1761 aa12.12□□□□□ -0.47
TRAPPC8-211ENST00000582539 NOL10Q9BSC4 688 aaKnown RBP12.12□□□□□ -0.47
TRAPPC8-211ENST00000582539 NBR1Q14596 966 aa12.11□□□□□ -0.47
TRAPPC8-211ENST00000582539 TNNQ9UQP3 1299 aa12.11□□□□□ -0.47
TRAPPC8-211ENST00000582539 CARMIL3Q8ND23 1372 aa12.11□□□□□ -0.47
TRAPPC8-211ENST00000582539 UBAP1LF5GYI3 381 aa12.11□□□□□ -0.47
TRAPPC8-211ENST00000582539 CNNM1Q9NRU3 951 aa12.11□□□□□ -0.47
TRAPPC8-211ENST00000582539 ZNF330Q9Y3S2 320 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC8-211ENST00000582539 SYTL4Q96C24 671 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC8-211ENST00000582539 BCL11BQ9C0K0 894 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC8-211ENST00000582539 HELLSQ9NRZ9 838 aa12.11□□□□□ -0.47
TRAPPC8-211ENST00000582539 LRP6O75581 1613 aa12.11□□□□□ -0.47
TRAPPC8-211ENST00000582539 CABLES1Q8TDN4 633 aa12.11□□□□□ -0.47
TRAPPC8-211ENST00000582539 NGLY1Q96IV0 654 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms