RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 AFDNP55196 1824 aaKnown RBP12.14□□□□□ -0.47
RFFL-210ENST00000582308 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.14□□□□□ -0.47
RFFL-210ENST00000582308 CAMTA2O94983 1202 aa12.14□□□□□ -0.47
RFFL-210ENST00000582308 RLBP1P12271 317 aa12.14□□□□□ -0.47
RFFL-210ENST00000582308 C20orf194Q5TEA3 1177 aa12.14□□□□□ -0.47
RFFL-210ENST00000582308 KSR2Q6VAB6 950 aa12.14□□□□□ -0.47
RFFL-210ENST00000582308 DZIP3Q86Y13 1208 aaKnown RBP12.14□□□□□ -0.47
RFFL-210ENST00000582308 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.14□□□□□ -0.47
RFFL-210ENST00000582308 PLBD2Q8NHP8 589 aa12.14□□□□□ -0.47
RFFL-210ENST00000582308 ARHGEF1Q92888 912 aaKnown RBP12.14□□□□□ -0.47
RFFL-210ENST00000582308 ARXQ96QS3 562 aa12.14□□□□□ -0.47
RFFL-210ENST00000582308 API5Q9BZZ5 524 aaKnown RBP12.14□□□□□ -0.47
RFFL-210ENST00000582308 TFCP2L1Q9NZI6 479 aa12.14□□□□□ -0.47
RFFL-210ENST00000582308 MAP3K15Q6ZN16 1313 aa12.13□□□□□ -0.47
RFFL-210ENST00000582308 SCN7AQ01118 1682 aa12.13□□□□□ -0.47
RFFL-210ENST00000582308 A0A087WZG4 1122 aa12.13□□□□□ -0.47
RFFL-210ENST00000582308 PHF14O94880 888 aa12.13□□□□□ -0.47
RFFL-210ENST00000582308 DDX58O95786 925 aaKnown RBP12.13□□□□□ -0.47
RFFL-210ENST00000582308 ADRA2BP18089 450 aa12.13□□□□□ -0.47
RFFL-210ENST00000582308 SSFA2P28290 1259 aa12.13□□□□□ -0.47
RFFL-210ENST00000582308 SLC15A2Q16348 729 aa12.13□□□□□ -0.47
RFFL-210ENST00000582308 HLFQ16534 295 aa12.13□□□□□ -0.47
RFFL-210ENST00000582308 TRAPPC3LQ5T215 181 aa12.13□□□□□ -0.47
RFFL-210ENST00000582308 KIF6Q6ZMV9 814 aa12.13□□□□□ -0.47
RFFL-210ENST00000582308 RIC3Q7Z5B4 369 aa12.13□□□□□ -0.47
RFFL-210ENST00000582308 NPM2Q86SE8 214 aaKnown RBP12.13□□□□□ -0.47
RFFL-210ENST00000582308 PANK1Q8TE04 598 aa12.13□□□□□ -0.47
RFFL-210ENST00000582308 CLUAP1Q96AJ1 413 aa12.13□□□□□ -0.47
RFFL-210ENST00000582308 ZBTB3Q9H5J0 574 aa12.13□□□□□ -0.47
RFFL-210ENST00000582308 MAP3K2Q9Y2U5 619 aa12.13□□□□□ -0.47
RFFL-210ENST00000582308 ABCC4O15439 1325 aa12.12□□□□□ -0.47
RFFL-210ENST00000582308 ERVV-1B6SEH8 477 aa12.12□□□□□ -0.47
RFFL-210ENST00000582308 COL23A1Q86Y22 540 aaPredicted RBP12.12□□□□□ -0.47
RFFL-210ENST00000582308 DZIP1LQ8IYY4 767 aaKnown RBP12.12□□□□□ -0.47
RFFL-210ENST00000582308 DNAAF4Q8WXU2 420 aa12.12□□□□□ -0.47
RFFL-210ENST00000582308 STK32BQ9NY57 414 aa12.12□□□□□ -0.47
RFFL-210ENST00000582308 SRP68Q9UHB9 627 aaKnown RBP12.12□□□□□ -0.47
RFFL-210ENST00000582308 NARFQ9UHQ1 456 aa12.12□□□□□ -0.47
RFFL-210ENST00000582308 PNPLA7Q6ZV29 1317 aa12.11□□□□□ -0.47
RFFL-210ENST00000582308 RFC4P35249 363 aa12.11□□□□□ -0.47
RFFL-210ENST00000582308 PDE3AQ14432 1141 aa12.11□□□□□ -0.47
RFFL-210ENST00000582308 SLC4A10Q6U841 1118 aa12.11□□□□□ -0.47
RFFL-210ENST00000582308 METTL22Q9BUU2 404 aaPredicted RBP12.11□□□□□ -0.47
RFFL-210ENST00000582308 BCL2L12Q9HB09 334 aa12.11□□□□□ -0.47
RFFL-210ENST00000582308 USP42Q9H9J4 1324 aaKnown RBP12.11□□□□□ -0.47
RFFL-210ENST00000582308 ZPR1O75312 459 aa12.1□□□□□ -0.47
RFFL-210ENST00000582308 TCIRG1Q13488 830 aa12.1□□□□□ -0.47
RFFL-210ENST00000582308 BEND3Q5T5X7 828 aa12.1□□□□□ -0.47
RFFL-210ENST00000582308 USPL1Q5W0Q7 1092 aa12.1□□□□□ -0.47
RFFL-210ENST00000582308 INTS3Q68E01 1043 aaKnown RBP12.1□□□□□ -0.47
RFFL-210ENST00000582308 GIGYF2Q6Y7W6 1299 aaKnown RBP12.1□□□□□ -0.47
RFFL-210ENST00000582308 TMEM57Q8N5G2 664 aa12.1□□□□□ -0.47
RFFL-210ENST00000582308 FLAD1Q8NFF5 587 aa12.1□□□□□ -0.47
RFFL-210ENST00000582308 PXDNLA1KZ92 1463 aa12.09□□□□□ -0.47
RFFL-210ENST00000582308 IGKV5-2P06315 115 aa12.09□□□□□ -0.47
RFFL-210ENST00000582308 MS4A1P11836 297 aa12.09□□□□□ -0.47
RFFL-210ENST00000582308 IRX6P78412 446 aaPredicted RBP12.09□□□□□ -0.47
RFFL-210ENST00000582308 FTSJ3Q8IY81 847 aaKnown RBP12.09□□□□□ -0.47
RFFL-210ENST00000582308 MYD88Q99836 296 aa12.09□□□□□ -0.47
RFFL-210ENST00000582308 ATP5J2-PTCD1G3V325 749 aa12.08□□□□□ -0.48
RFFL-210ENST00000582308 RGL2O15211 777 aa12.08□□□□□ -0.48
RFFL-210ENST00000582308 CCT4P50991 539 aaKnown RBP12.08□□□□□ -0.48
RFFL-210ENST00000582308 CWF19L2Q2TBE0 894 aaKnown RBP12.08□□□□□ -0.48
RFFL-210ENST00000582308 CLEC4GQ6UXB4 293 aa12.08□□□□□ -0.48
RFFL-210ENST00000582308 ZNF34Q8IZ26 560 aa12.08□□□□□ -0.48
RFFL-210ENST00000582308 LINS1Q8NG48 757 aa12.08□□□□□ -0.48
RFFL-210ENST00000582308 ISCA1Q9BUE6 129 aa12.08□□□□□ -0.48
RFFL-210ENST00000582308 PDGFDQ9GZP0 370 aaPredicted RBP12.08□□□□□ -0.48
RFFL-210ENST00000582308 COG6Q9Y2V7 657 aa12.08□□□□□ -0.48
RFFL-210ENST00000582308 ATP10DQ9P241 1426 aa12.08□□□□□ -0.48
RFFL-210ENST00000582308 NEURL1BA8MQ27 555 aa12.07□□□□□ -0.48
RFFL-210ENST00000582308 MSH5O43196 834 aa12.07□□□□□ -0.48
RFFL-210ENST00000582308 GYS1P13807 737 aa12.07□□□□□ -0.48
RFFL-210ENST00000582308 GPTP24298 496 aa12.07□□□□□ -0.48
RFFL-210ENST00000582308 NEXNQ0ZGT2 675 aa12.07□□□□□ -0.48
RFFL-210ENST00000582308 TRIM28Q13263 835 aaKnown RBP12.07□□□□□ -0.48
RFFL-210ENST00000582308 FKBP8Q14318 412 aa12.07□□□□□ -0.48
RFFL-210ENST00000582308 MVPQ14764 893 aaKnown RBP12.07□□□□□ -0.48
RFFL-210ENST00000582308 HSP90AB3PQ58FF7 597 aa12.07□□□□□ -0.48
RFFL-210ENST00000582308 TBC1D9BQ66K14 1250 aa12.07□□□□□ -0.48
RFFL-210ENST00000582308 CRBNQ96SW2 442 aa12.07□□□□□ -0.48
RFFL-210ENST00000582308 SRCIN1Q9C0H9 1055 aa12.07□□□□□ -0.48
RFFL-210ENST00000582308 ZNF652Q9Y2D9 606 aa12.07□□□□□ -0.48
RFFL-210ENST00000582308 CASZ1Q86V15 1759 aa12.07□□□□□ -0.48
RFFL-210ENST00000582308 COL24A1Q17RW2 1714 aa12.06□□□□□ -0.48
RFFL-210ENST00000582308 ALDH1L1O75891 902 aa12.06□□□□□ -0.48
RFFL-210ENST00000582308 ITPRIPQ8IWB1 547 aa12.06□□□□□ -0.48
RFFL-210ENST00000582308 UBN2Q6ZU65 1347 aa12.06□□□□□ -0.48
RFFL-210ENST00000582308 GCKRQ14397 625 aa12.05□□□□□ -0.48
RFFL-210ENST00000582308 R3HDM1Q15032 1099 aaKnown RBP12.05□□□□□ -0.48
RFFL-210ENST00000582308 NLRP10Q86W26 655 aa12.05□□□□□ -0.48
RFFL-210ENST00000582308 CCDC191Q8NCU4 936 aa12.05□□□□□ -0.48
RFFL-210ENST00000582308 USP44Q9H0E7 712 aa12.05□□□□□ -0.48
RFFL-210ENST00000582308 NIP7Q9Y221 180 aaKnown RBP eCLIP12.05□□□□□ -0.48
RFFL-210ENST00000582308 IBTKQ9P2D0 1353 aaPredicted RBP12.05□□□□□ -0.48
RFFL-210ENST00000582308 ZBTB7BO15156 539 aaPredicted RBP12.04□□□□□ -0.48
RFFL-210ENST00000582308 TM4SF1P30408 202 aa12.04□□□□□ -0.48
RFFL-210ENST00000582308 NFIXQ14938 502 aa12.04□□□□□ -0.48
RFFL-210ENST00000582308 BICDL1Q6ZP65 573 aa12.04□□□□□ -0.48
RFFL-210ENST00000582308 EXOC6Q8TAG9 804 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms