RNA–Protein interactions for RNA: ENST00000581967.1

CTC1-210, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-210ENST00000581967 COL3A1P02461 1466 aaPredicted RBP8.79□□□□□ -1
CTC1-210ENST00000581967 KLRG2A4D1S0 409 aaPredicted RBP8.79□□□□□ -1
CTC1-210ENST00000581967 RGL2O15211 777 aa8.79□□□□□ -1
CTC1-210ENST00000581967 KCNQ3O43525 872 aa8.79□□□□□ -1
CTC1-210ENST00000581967 LDHDQ86WU2 507 aa8.79□□□□□ -1
CTC1-210ENST00000581967 NBPF5PQ86XG9 351 aaPredicted RBP8.79□□□□□ -1
CTC1-210ENST00000581967 TAF1DQ9H5J8 278 aaPredicted RBP8.79□□□□□ -1
CTC1-210ENST00000581967 MKRN1Q9UHC7 482 aaKnown RBP8.79□□□□□ -1
CTC1-210ENST00000581967 USP16Q9Y5T5 823 aa8.79□□□□□ -1
CTC1-210ENST00000581967 PASKQ96RG2 1323 aa8.79□□□□□ -1
CTC1-210ENST00000581967 CNTNAP1P78357 1384 aa8.78□□□□□ -1
CTC1-210ENST00000581967 TIAM2Q8IVF5 1701 aa8.78□□□□□ -1
CTC1-210ENST00000581967 BTBD11A6QL63 1104 aa8.78□□□□□ -1
CTC1-210ENST00000581967 NPR1P16066 1061 aa8.78□□□□□ -1
CTC1-210ENST00000581967 CCDC93Q567U6 631 aa8.78□□□□□ -1
CTC1-210ENST00000581967 PHACTR3Q96KR7 559 aa8.78□□□□□ -1
CTC1-210ENST00000581967 PRDM10Q9NQV6 1147 aa8.78□□□□□ -1
CTC1-210ENST00000581967 ZNF652Q9Y2D9 606 aa8.78□□□□□ -1
CTC1-210ENST00000581967 ITGBL1O95965 494 aaPredicted RBP8.77□□□□□ -1.01
CTC1-210ENST00000581967 SNRPA1P09661 255 aaKnown RBP8.77□□□□□ -1.01
CTC1-210ENST00000581967 PRKAR2BP31323 418 aa8.77□□□□□ -1.01
CTC1-210ENST00000581967 FKBP4Q02790 459 aaKnown RBP eCLIP8.77□□□□□ -1.01
CTC1-210ENST00000581967 TPTE2Q6XPS3 522 aa8.77□□□□□ -1.01
CTC1-210ENST00000581967 RTKN2Q8IZC4 609 aa8.77□□□□□ -1.01
CTC1-210ENST00000581967 CCER1Q8TC90 406 aaPredicted RBP8.77□□□□□ -1.01
CTC1-210ENST00000581967 SCN7AQ01118 1682 aa8.77□□□□□ -1.01
CTC1-210ENST00000581967 PCNTO95613 3336 aa8.77□□□□□ -1.01
CTC1-210ENST00000581967 ANKRD31Q8N7Z5 1873 aa8.77□□□□□ -1.01
CTC1-210ENST00000581967 PRAMEF22A3QJZ6 481 aa8.76□□□□□ -1.01
CTC1-210ENST00000581967 TMEM88BA6NKF7 163 aa8.76□□□□□ -1.01
CTC1-210ENST00000581967 NBPF26B4DH59 902 aa8.76□□□□□ -1.01
CTC1-210ENST00000581967 FOXN1O15353 648 aa8.76□□□□□ -1.01
CTC1-210ENST00000581967 PIP4K2AP48426 406 aaPredicted RBP8.76□□□□□ -1.01
CTC1-210ENST00000581967 CTCFP49711 727 aaPredicted RBP8.76□□□□□ -1.01
CTC1-210ENST00000581967 VEGFBP49765 207 aa8.76□□□□□ -1.01
CTC1-210ENST00000581967 NBPF10Q6P3W6 841 aaKnown RBP8.76□□□□□ -1.01
CTC1-210ENST00000581967 NBPF15Q8N660 670 aa8.76□□□□□ -1.01
CTC1-210ENST00000581967 RSPH6AQ9H0K4 717 aa8.76□□□□□ -1.01
CTC1-210ENST00000581967 ZNF277Q9NRM2 450 aaPredicted RBP8.76□□□□□ -1.01
CTC1-210ENST00000581967 HACL1Q9UJ83 578 aa8.76□□□□□ -1.01
CTC1-210ENST00000581967 COL11A2P13942 1736 aaPredicted RBP8.76□□□□□ -1.01
CTC1-210ENST00000581967 FER1L6Q2WGJ9 1857 aa8.76□□□□□ -1.01
CTC1-210ENST00000581967 ZNF541Q9H0D2 1346 aa8.76□□□□□ -1.01
CTC1-210ENST00000581967 FZD9O00144 591 aa8.75□□□□□ -1.01
CTC1-210ENST00000581967 ALDH1B1P30837 517 aa8.75□□□□□ -1.01
CTC1-210ENST00000581967 EPHX2P34913 555 aa8.75□□□□□ -1.01
CTC1-210ENST00000581967 PNMA8AQ86V59 439 aaPredicted RBP8.75□□□□□ -1.01
CTC1-210ENST00000581967 RTF1Q92541 710 aaKnown RBP8.75□□□□□ -1.01
CTC1-210ENST00000581967 AIDAQ96BJ3 306 aa8.75□□□□□ -1.01
CTC1-210ENST00000581967 CFAP53Q96M91 514 aa8.75□□□□□ -1.01
CTC1-210ENST00000581967 WBP1LQ9NX94 342 aa8.75□□□□□ -1.01
CTC1-210ENST00000581967 NIP7Q9Y221 180 aaKnown RBP eCLIP8.75□□□□□ -1.01
CTC1-210ENST00000581967 NUDCQ9Y266 331 aa8.75□□□□□ -1.01
CTC1-210ENST00000581967 SLX4Q8IY92 1834 aa8.75□□□□□ -1.01
CTC1-210ENST00000581967 HTATSF1O43719 755 aaKnown RBP8.74□□□□□ -1.01
CTC1-210ENST00000581967 CNGB1Q14028 1251 aaPredicted RBP8.74□□□□□ -1.01
CTC1-210ENST00000581967 EAPPQ56P03 285 aaPredicted RBP8.74□□□□□ -1.01
CTC1-210ENST00000581967 OLFM4Q6UX06 510 aa8.74□□□□□ -1.01
CTC1-210ENST00000581967 MCM10Q7L590 875 aa8.74□□□□□ -1.01
CTC1-210ENST00000581967 CNTROBQ8N137 903 aa8.74□□□□□ -1.01
CTC1-210ENST00000581967 GPC2Q8N158 579 aa8.74□□□□□ -1.01
CTC1-210ENST00000581967 SYNE4Q8N205 404 aa8.74□□□□□ -1.01
CTC1-210ENST00000581967 CLEC11AQ9Y240 323 aa8.74□□□□□ -1.01
CTC1-210ENST00000581967 CCDC88AQ3V6T2 1871 aa8.73□□□□□ -1.01
CTC1-210ENST00000581967 RASSF10A6NK89 507 aa8.73□□□□□ -1.01
CTC1-210ENST00000581967 U2AF1L5P0DN76 240 aaPredicted RBP8.73□□□□□ -1.01
CTC1-210ENST00000581967 IARSP41252 1262 aaKnown RBP8.73□□□□□ -1.01
CTC1-210ENST00000581967 U2AF1Q01081 240 aaKnown RBP eCLIP8.73□□□□□ -1.01
CTC1-210ENST00000581967 TAF7Q15545 349 aaPredicted RBP8.73□□□□□ -1.01
CTC1-210ENST00000581967 HLFQ16534 295 aa8.73□□□□□ -1.01
CTC1-210ENST00000581967 CRY2Q49AN0 593 aa8.73□□□□□ -1.01
CTC1-210ENST00000581967 CC2D2BQ6DHV5 1058 aa8.73□□□□□ -1.01
CTC1-210ENST00000581967 PSMD1Q99460 953 aa8.73□□□□□ -1.01
CTC1-210ENST00000581967 DICER1Q9UPY3 1922 aaKnown RBP8.73□□□□□ -1.01
CTC1-210ENST00000581967 SIPA1L3O60292 1781 aaPredicted RBP8.73□□□□□ -1.01
CTC1-210ENST00000581967 FAM177BA6PVY3 158 aa8.72□□□□□ -1.01
CTC1-210ENST00000581967 ERVV-1B6SEH8 477 aa8.72□□□□□ -1.01
CTC1-210ENST00000581967 GTF2E1P29083 439 aaPredicted RBP8.72□□□□□ -1.01
CTC1-210ENST00000581967 HOXA10P31260 410 aaPredicted RBP8.72□□□□□ -1.01
CTC1-210ENST00000581967 LBX1P52954 281 aa8.72□□□□□ -1.01
CTC1-210ENST00000581967 DEFB115Q30KQ5 88 aa8.72□□□□□ -1.01
CTC1-210ENST00000581967 GRIPAP1Q4V328 841 aa8.72□□□□□ -1.01
CTC1-210ENST00000581967 MAP1SQ66K74 1059 aaPredicted RBP8.72□□□□□ -1.01
CTC1-210ENST00000581967 JDP2Q8WYK2 163 aa8.72□□□□□ -1.01
CTC1-210ENST00000581967 NYXQ9GZU5 481 aa8.72□□□□□ -1.01
CTC1-210ENST00000581967 RNF123Q5XPI4 1314 aa8.72□□□□□ -1.01
CTC1-210ENST00000581967 VIRMAQ69YN4 1812 aaKnown RBP8.71□□□□□ -1.01
CTC1-210ENST00000581967 MAP2K1Q02750 393 aaPredicted RBP8.71□□□□□ -1.02
CTC1-210ENST00000581967 DCTN1Q14203 1278 aa8.71□□□□□ -1.02
CTC1-210ENST00000581967 BCORQ6W2J9 1755 aa8.71□□□□□ -1.02
CTC1-210ENST00000581967 SNED1Q8TER0 1413 aa8.71□□□□□ -1.02
CTC1-210ENST00000581967 SCN4AP35499 1836 aa8.7□□□□□ -1.02
CTC1-210ENST00000581967 HSPA8P11142 646 aaKnown RBP8.7□□□□□ -1.02
CTC1-210ENST00000581967 PPP2R1AP30153 589 aa8.7□□□□□ -1.02
CTC1-210ENST00000581967 EIF6P56537 245 aaKnown RBP8.7□□□□□ -1.02
CTC1-210ENST00000581967 CRAMP1Q96RY5 1269 aa8.7□□□□□ -1.02
CTC1-210ENST00000581967 DDX21Q9NR30 783 aaKnown RBP eCLIP8.7□□□□□ -1.02
CTC1-210ENST00000581967 MIS18AQ9NYP9 233 aa8.7□□□□□ -1.02
CTC1-210ENST00000581967 ABT1Q9ULW3 272 aaKnown RBP8.7□□□□□ -1.02
CTC1-210ENST00000581967 WDR33Q9C0J8 1336 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms