RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 UBR2Q8IWV8 1755 aa17.2■□□□□ 0.34
CSNK1D-218ENST00000581655 ZNF541Q9H0D2 1346 aa17.2■□□□□ 0.34
CSNK1D-218ENST00000581655 EPHX2P34913 555 aa17.19■□□□□ 0.34
CSNK1D-218ENST00000581655 IL13P35225 146 aa17.19■□□□□ 0.34
CSNK1D-218ENST00000581655 MAP1SQ66K74 1059 aaPredicted RBP17.19■□□□□ 0.34
CSNK1D-218ENST00000581655 CNTROBQ8N137 903 aa17.19■□□□□ 0.34
CSNK1D-218ENST00000581655 CNBD1Q8NA66 436 aa17.19■□□□□ 0.34
CSNK1D-218ENST00000581655 RGS19P49795 217 aa17.18■□□□□ 0.34
CSNK1D-218ENST00000581655 MASTLQ96GX5 879 aa17.18■□□□□ 0.34
CSNK1D-218ENST00000581655 ABT1Q9ULW3 272 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-218ENST00000581655 ST5P78524 1137 aa17.17■□□□□ 0.34
CSNK1D-218ENST00000581655 CCDC93Q567U6 631 aa17.17■□□□□ 0.34
CSNK1D-218ENST00000581655 MORC1Q86VD1 984 aa17.17■□□□□ 0.34
CSNK1D-218ENST00000581655 RNF123Q5XPI4 1314 aa17.17■□□□□ 0.34
CSNK1D-218ENST00000581655 TTC5Q8N0Z6 440 aa17.16■□□□□ 0.34
CSNK1D-218ENST00000581655 C7orf43Q8WVR3 580 aa17.16■□□□□ 0.34
CSNK1D-218ENST00000581655 SETDB2Q96T68 719 aa17.16■□□□□ 0.34
CSNK1D-218ENST00000581655 PANK3Q9H999 370 aa17.16■□□□□ 0.34
CSNK1D-218ENST00000581655 ZNF277Q9NRM2 450 aaPredicted RBP17.16■□□□□ 0.34
CSNK1D-218ENST00000581655 FKBP4Q02790 459 aaKnown RBP eCLIP17.15■□□□□ 0.34
CSNK1D-218ENST00000581655 PNMA8AQ86V59 439 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-218ENST00000581655 HMOX1P09601 288 aa17.14■□□□□ 0.33
CSNK1D-218ENST00000581655 IL6STP40189 918 aaPredicted RBP17.14■□□□□ 0.33
CSNK1D-218ENST00000581655 PAXIP1Q6ZW49 1069 aaPredicted RBP17.14■□□□□ 0.33
CSNK1D-218ENST00000581655 ZNF496Q96IT1 587 aaPredicted RBP17.14■□□□□ 0.33
CSNK1D-218ENST00000581655 BEGAINQ9BUH8 593 aa17.14■□□□□ 0.33
CSNK1D-218ENST00000581655 THSD7BQ9C0I4 1608 aa17.14■□□□□ 0.33
CSNK1D-218ENST00000581655 PDE4DIPQ5VU43 2346 aa17.13■□□□□ 0.33
CSNK1D-218ENST00000581655 CAMTA2O94983 1202 aa17.13■□□□□ 0.33
CSNK1D-218ENST00000581655 GRM1Q13255 1194 aa17.13■□□□□ 0.33
CSNK1D-218ENST00000581655 MTHFSDQ2M296 383 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-218ENST00000581655 OLFM4Q6UX06 510 aa17.13■□□□□ 0.33
CSNK1D-218ENST00000581655 CAPNS2Q96L46 248 aa17.13■□□□□ 0.33
CSNK1D-218ENST00000581655 DDX21Q9NR30 783 aaKnown RBP eCLIP17.13■□□□□ 0.336e-8■■□□□ 13.9
CSNK1D-218ENST00000581655 HEG1Q9ULI3 1381 aa17.13■□□□□ 0.33
CSNK1D-218ENST00000581655 NPM2Q86SE8 214 aaKnown RBP17.12■□□□□ 0.33
CSNK1D-218ENST00000581655 TSKSQ9UJT2 592 aa17.12■□□□□ 0.33
CSNK1D-218ENST00000581655 BCORQ6W2J9 1755 aa17.11■□□□□ 0.33
CSNK1D-218ENST00000581655 NPR1P16066 1061 aa17.11■□□□□ 0.33
CSNK1D-218ENST00000581655 ECE1P42892 770 aa17.11■□□□□ 0.33
CSNK1D-218ENST00000581655 FMR1Q06787 632 aaKnown RBP eCLIP17.11■□□□□ 0.33
CSNK1D-218ENST00000581655 CYP4F22Q6NT55 531 aa17.11■□□□□ 0.33
CSNK1D-218ENST00000581655 CFAP44Q96MT7 982 aa17.11■□□□□ 0.33
CSNK1D-218ENST00000581655 GPR101Q96P66 508 aaPredicted RBP17.11■□□□□ 0.33
CSNK1D-218ENST00000581655 TEX13AQ9BXU3 409 aaPredicted RBP17.11■□□□□ 0.33
CSNK1D-218ENST00000581655 FZD9O00144 591 aa17.1■□□□□ 0.33
CSNK1D-218ENST00000581655 A1BGP04217 495 aa17.1■□□□□ 0.33
CSNK1D-218ENST00000581655 NBPF5PQ86XG9 351 aaPredicted RBP17.1■□□□□ 0.33
CSNK1D-218ENST00000581655 GPC2Q8N158 579 aa17.1■□□□□ 0.33
CSNK1D-218ENST00000581655 IARSP41252 1262 aaKnown RBP17.09■□□□□ 0.33
CSNK1D-218ENST00000581655 ZNF790Q6PG37 636 aa17.09■□□□□ 0.33
CSNK1D-218ENST00000581655 DZIP3Q86Y13 1208 aaKnown RBP17.09■□□□□ 0.33
CSNK1D-218ENST00000581655 RTKN2Q8IZC4 609 aa17.09■□□□□ 0.33
CSNK1D-218ENST00000581655 CASP8AP2Q9UKL3 1982 aa17.09■□□□□ 0.33
CSNK1D-218ENST00000581655 TNRC18O15417 2968 aaPredicted RBP17.09■□□□□ 0.33
CSNK1D-218ENST00000581655 TRPM7Q96QT4 1865 aa17.08■□□□□ 0.33
CSNK1D-218ENST00000581655 SYNE4Q8N205 404 aa17.08■□□□□ 0.32
CSNK1D-218ENST00000581655 TEFQ10587 303 aa17.07■□□□□ 0.32
CSNK1D-218ENST00000581655 MCOLN1Q9GZU1 580 aa17.07■□□□□ 0.32
CSNK1D-218ENST00000581655 GJA3Q9Y6H8 435 aa17.07■□□□□ 0.32
CSNK1D-218ENST00000581655 LTBP1Q14766 1721 aa17.07■□□□□ 0.32
CSNK1D-218ENST00000581655 KLRG2A4D1S0 409 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-218ENST00000581655 AOC2O75106 756 aa17.06■□□□□ 0.32
CSNK1D-218ENST00000581655 TRAF5O00463 557 aa17.05■□□□□ 0.32
CSNK1D-218ENST00000581655 LMOD1P29536 600 aaPredicted RBP17.05■□□□□ 0.32
CSNK1D-218ENST00000581655 PIP4K2AP48426 406 aaPredicted RBP17.05■□□□□ 0.32
CSNK1D-218ENST00000581655 CST9Q5W186 159 aa17.05■□□□□ 0.32
CSNK1D-218ENST00000581655 JDP2Q8WYK2 163 aa17.05■□□□□ 0.32
CSNK1D-218ENST00000581655 FMNL2Q96PY5 1086 aa17.05■□□□□ 0.32
CSNK1D-218ENST00000581655 SIPA1L3O60292 1781 aaPredicted RBP17.05■□□□□ 0.32
CSNK1D-218ENST00000581655 EPS15P42566 896 aa17.04■□□□□ 0.32
CSNK1D-218ENST00000581655 EIF6P56537 245 aaKnown RBP17.04■□□□□ 0.32
CSNK1D-218ENST00000581655 IL17REQ8NFR9 667 aa17.04■□□□□ 0.32
CSNK1D-218ENST00000581655 TLL2Q9Y6L7 1015 aa17.04■□□□□ 0.32
CSNK1D-218ENST00000581655 FAM177BA6PVY3 158 aa17.03■□□□□ 0.32
CSNK1D-218ENST00000581655 MAP2K2P36507 400 aa17.03■□□□□ 0.32
CSNK1D-218ENST00000581655 SCNN1DP51172 638 aa17.03■□□□□ 0.32
CSNK1D-218ENST00000581655 CLEC4GQ6UXB4 293 aa17.03■□□□□ 0.32
CSNK1D-218ENST00000581655 ZNF652Q9Y2D9 606 aa17.03■□□□□ 0.32
CSNK1D-218ENST00000581655 KNSTRNQ9Y448 316 aa17.03■□□□□ 0.32
CSNK1D-218ENST00000581655 COL4A5P29400 1685 aa17.03■□□□□ 0.32
CSNK1D-218ENST00000581655 ALDH1B1P30837 517 aa17.02■□□□□ 0.32
CSNK1D-218ENST00000581655 TPTE2Q6XPS3 522 aa17.02■□□□□ 0.32
CSNK1D-218ENST00000581655 PSMD1Q99460 953 aa17.02■□□□□ 0.32
CSNK1D-218ENST00000581655 SNED1Q8TER0 1413 aa17.02■□□□□ 0.31
CSNK1D-218ENST00000581655 GNAT3A8MTJ3 354 aa17.01■□□□□ 0.31
CSNK1D-218ENST00000581655 KCNQ3O43525 872 aa17.01■□□□□ 0.31
CSNK1D-218ENST00000581655 CA12O43570 354 aa17.01■□□□□ 0.31
CSNK1D-218ENST00000581655 DGKZQ13574 1117 aa17.01■□□□□ 0.31
CSNK1D-218ENST00000581655 NIP7Q9Y221 180 aaKnown RBP eCLIP17.01■□□□□ 0.31
CSNK1D-218ENST00000581655 USP16Q9Y5T5 823 aa17.01■□□□□ 0.31
CSNK1D-218ENST00000581655 DIAPH1O60610 1272 aaKnown RBP17■□□□□ 0.31
CSNK1D-218ENST00000581655 USP50Q70EL3 339 aaPredicted RBP17■□□□□ 0.31
CSNK1D-218ENST00000581655 SAPCD2Q86UD0 394 aa16.99■□□□□ 0.31
CSNK1D-218ENST00000581655 PRAMEF22A3QJZ6 481 aa16.98■□□□□ 0.31
CSNK1D-218ENST00000581655 HSPA5P11021 654 aaKnown RBP16.98■□□□□ 0.31
CSNK1D-218ENST00000581655 AMER1Q5JTC6 1135 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-218ENST00000581655 LARGE2Q8N3Y3 721 aa16.98■□□□□ 0.31
CSNK1D-218ENST00000581655 GAS2L2Q8NHY3 880 aa16.98■□□□□ 0.31
CSNK1D-218ENST00000581655 BTBD11A6QL63 1104 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms