RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 TPTE2Q6XPS3 522 aa17.93■□□□□ 0.46
PGAP3-207ENST00000580898 CCDC24Q8N4L8 307 aa17.93■□□□□ 0.46
PGAP3-207ENST00000580898 PLEKHF1Q96S99 279 aa17.93■□□□□ 0.46
PGAP3-207ENST00000580898 SBF1O95248 1867 aa17.92■□□□□ 0.46
PGAP3-207ENST00000580898 GLTPD2A6NH11 291 aa17.92■□□□□ 0.46
PGAP3-207ENST00000580898 NFKBIEO00221 500 aa17.92■□□□□ 0.46
PGAP3-207ENST00000580898 C21orf2O43822 256 aa17.92■□□□□ 0.46
PGAP3-207ENST00000580898 SRGNP10124 158 aa17.92■□□□□ 0.46
PGAP3-207ENST00000580898 NIP7Q9Y221 180 aaKnown RBP eCLIP17.92■□□□□ 0.46
PGAP3-207ENST00000580898 ANKRD31Q8N7Z5 1873 aa17.92■□□□□ 0.46
PGAP3-207ENST00000580898 LAMB4A4D0S4 1761 aa17.91■□□□□ 0.46
PGAP3-207ENST00000580898 SMC1BQ8NDV3 1235 aa17.91■□□□□ 0.46
PGAP3-207ENST00000580898 MIS18AQ9NYP9 233 aa17.91■□□□□ 0.46
PGAP3-207ENST00000580898 ZNF219Q9P2Y4 722 aaPredicted RBP17.91■□□□□ 0.46
PGAP3-207ENST00000580898 LTBP3Q9NS15 1303 aa17.91■□□□□ 0.46
PGAP3-207ENST00000580898 COL11A2P13942 1736 aaPredicted RBP17.9■□□□□ 0.46
PGAP3-207ENST00000580898 NBPF26B4DH59 902 aa17.9■□□□□ 0.46
PGAP3-207ENST00000580898 VEGFAP15692 232 aaPredicted RBP17.9■□□□□ 0.46
PGAP3-207ENST00000580898 GTF2E1P29083 439 aaPredicted RBP17.9■□□□□ 0.46
PGAP3-207ENST00000580898 PRPF40BQ6NWY9 871 aaKnown RBP17.9■□□□□ 0.46
PGAP3-207ENST00000580898 NBPF10Q6P3W6 841 aaKnown RBP17.9■□□□□ 0.46
PGAP3-207ENST00000580898 KIF6Q6ZMV9 814 aa17.9■□□□□ 0.46
PGAP3-207ENST00000580898 NBPF15Q8N660 670 aa17.9■□□□□ 0.46
PGAP3-207ENST00000580898 TAOK3Q9H2K8 898 aa17.9■□□□□ 0.46
PGAP3-207ENST00000580898 NPR1P16066 1061 aa17.89■□□□□ 0.45
PGAP3-207ENST00000580898 LMOD3Q0VAK6 560 aa17.89■□□□□ 0.45
PGAP3-207ENST00000580898 ERFEQ4G0M1 354 aa17.89■□□□□ 0.45
PGAP3-207ENST00000580898 NYXQ9GZU5 481 aa17.89■□□□□ 0.45
PGAP3-207ENST00000580898 TIAM2Q8IVF5 1701 aa17.89■□□□□ 0.45
PGAP3-207ENST00000580898 ERVV-1B6SEH8 477 aa17.88■□□□□ 0.45
PGAP3-207ENST00000580898 EIF4A1P60842 406 aaKnown RBP17.88■□□□□ 0.45
PGAP3-207ENST00000580898 KDM3BQ7LBC6 1761 aa17.88■□□□□ 0.45
PGAP3-207ENST00000580898 PRELPP51888 382 aa17.87■□□□□ 0.45
PGAP3-207ENST00000580898 CCDC93Q567U6 631 aa17.87■□□□□ 0.45
PGAP3-207ENST00000580898 TSPYL4Q9UJ04 414 aa17.87■□□□□ 0.45
PGAP3-207ENST00000580898 DLG5Q8TDM6 1919 aa17.87■□□□□ 0.45
PGAP3-207ENST00000580898 ERBB4Q15303 1308 aa17.87■□□□□ 0.45
PGAP3-207ENST00000580898 NGEFQ8N5V2 710 aa17.86■□□□□ 0.45
PGAP3-207ENST00000580898 RRP7AQ9Y3A4 280 aaKnown RBP17.86■□□□□ 0.45
PGAP3-207ENST00000580898 KLRG2A4D1S0 409 aaPredicted RBP17.85■□□□□ 0.45
PGAP3-207ENST00000580898 FAM177BA6PVY3 158 aa17.85■□□□□ 0.45
PGAP3-207ENST00000580898 ALDH1B1P30837 517 aa17.85■□□□□ 0.45
PGAP3-207ENST00000580898 RIPK4P57078 832 aa17.85■□□□□ 0.45
PGAP3-207ENST00000580898 MAP3K15Q6ZN16 1313 aa17.85■□□□□ 0.45
PGAP3-207ENST00000580898 MYBBP1AQ9BQG0 1328 aaKnown RBP17.85■□□□□ 0.45
PGAP3-207ENST00000580898 THUMPD2Q9BTF0 503 aaKnown RBP17.85■□□□□ 0.45
PGAP3-207ENST00000580898 BABAM1Q9NWV8 329 aa17.85■□□□□ 0.45
PGAP3-207ENST00000580898 ARFGEF2Q9Y6D5 1785 aa17.85■□□□□ 0.45
PGAP3-207ENST00000580898 CEP350Q5VT06 3117 aa17.85■□□□□ 0.45
PGAP3-207ENST00000580898 FER1L6Q2WGJ9 1857 aa17.84■□□□□ 0.45
PGAP3-207ENST00000580898 WDR90Q96KV7 1748 aa17.84■□□□□ 0.45
PGAP3-207ENST00000580898 MYL6BP14649 208 aa17.84■□□□□ 0.45
PGAP3-207ENST00000580898 HLFQ16534 295 aa17.84■□□□□ 0.45
PGAP3-207ENST00000580898 RTKN2Q8IZC4 609 aa17.83■□□□□ 0.44
PGAP3-207ENST00000580898 IBTKQ9P2D0 1353 aaPredicted RBP17.82■□□□□ 0.44
PGAP3-207ENST00000580898 DDX10Q13206 875 aaKnown RBP17.82■□□□□ 0.44
PGAP3-207ENST00000580898 WDR43Q15061 677 aaKnown RBP eCLIP17.82■□□□□ 0.44
PGAP3-207ENST00000580898 TMPOP42166 694 aaKnown RBP17.81■□□□□ 0.44
PGAP3-207ENST00000580898 FKBP4Q02790 459 aaKnown RBP eCLIP17.81■□□□□ 0.44
PGAP3-207ENST00000580898 DNAJC5GQ8N7S2 189 aa17.81■□□□□ 0.44
PGAP3-207ENST00000580898 CCDC88AQ3V6T2 1871 aa17.81■□□□□ 0.44
PGAP3-207ENST00000580898 SLX4Q8IY92 1834 aa17.81■□□□□ 0.44
PGAP3-207ENST00000580898 CACNA1SQ13698 1873 aa17.8■□□□□ 0.44
PGAP3-207ENST00000580898 TTLL7Q6ZT98 887 aa17.8■□□□□ 0.44
PGAP3-207ENST00000580898 PPP1R42Q7Z4L9 355 aa17.8■□□□□ 0.44
PGAP3-207ENST00000580898 C7orf43Q8WVR3 580 aa17.8■□□□□ 0.44
PGAP3-207ENST00000580898 RPGRQ92834 1020 aaKnown RBP17.8■□□□□ 0.44
PGAP3-207ENST00000580898 KLRG1Q96E93 195 aa17.8■□□□□ 0.44
PGAP3-207ENST00000580898 ZBTB3Q9H5J0 574 aa17.8■□□□□ 0.44
PGAP3-207ENST00000580898 DICER1Q9UPY3 1922 aaKnown RBP17.8■□□□□ 0.44
PGAP3-207ENST00000580898 IQCA1LA6NCM1 817 aa17.79■□□□□ 0.44
PGAP3-207ENST00000580898 PARP10Q53GL7 1025 aa17.79■□□□□ 0.44
PGAP3-207ENST00000580898 GIGYF2Q6Y7W6 1299 aaKnown RBP17.79■□□□□ 0.44
PGAP3-207ENST00000580898 RIC1Q4ADV7 1423 aa17.79■□□□□ 0.44
PGAP3-207ENST00000580898 EIF2S2P20042 333 aaKnown RBP17.78■□□□□ 0.44
PGAP3-207ENST00000580898 GPTP24298 496 aa17.78■□□□□ 0.44
PGAP3-207ENST00000580898 CRY2Q49AN0 593 aa17.78■□□□□ 0.44
PGAP3-207ENST00000580898 GRIPAP1Q4V328 841 aa17.78■□□□□ 0.44
PGAP3-207ENST00000580898 CC2D2BQ6DHV5 1058 aa17.78■□□□□ 0.44
PGAP3-207ENST00000580898 NUTM1Q86Y26 1132 aa17.78■□□□□ 0.44
PGAP3-207ENST00000580898 IFFO2Q5TF58 517 aa17.77■□□□□ 0.44
PGAP3-207ENST00000580898 RUNDC1Q96C34 613 aa17.77■□□□□ 0.44
PGAP3-207ENST00000580898 RBM17Q96I25 401 aaKnown RBP17.77■□□□□ 0.44
PGAP3-207ENST00000580898 TMX4Q9H1E5 349 aaPredicted RBP17.77■□□□□ 0.44
PGAP3-207ENST00000580898 ABCC12Q96J65 1359 aa17.77■□□□□ 0.43
PGAP3-207ENST00000580898 POTECB2RU33 542 aa17.76■□□□□ 0.43
PGAP3-207ENST00000580898 DDNO94850 711 aaPredicted RBP17.76■□□□□ 0.43
PGAP3-207ENST00000580898 HSP90AB3PQ58FF7 597 aa17.76■□□□□ 0.43
PGAP3-207ENST00000580898 ZNF34Q8IZ26 560 aa17.76■□□□□ 0.43
PGAP3-207ENST00000580898 UBN2Q6ZU65 1347 aa17.75■□□□□ 0.43
PGAP3-207ENST00000580898 NUP98P52948 1817 aa17.75■□□□□ 0.43
PGAP3-207ENST00000580898 NEUROD2Q15784 382 aa17.75■□□□□ 0.43
PGAP3-207ENST00000580898 SUSD4Q5VX71 490 aa17.75■□□□□ 0.43
PGAP3-207ENST00000580898 ZNF277Q9NRM2 450 aaPredicted RBP17.75■□□□□ 0.43
PGAP3-207ENST00000580898 RNF123Q5XPI4 1314 aa17.74■□□□□ 0.43
PGAP3-207ENST00000580898 NTSR2O95665 410 aa17.74■□□□□ 0.43
PGAP3-207ENST00000580898 IARSP41252 1262 aaKnown RBP17.74■□□□□ 0.43
PGAP3-207ENST00000580898 HTRA3P83110 453 aa17.74■□□□□ 0.43
PGAP3-207ENST00000580898 CHADLQ6NUI6 762 aa17.74■□□□□ 0.43
PGAP3-207ENST00000580898 CCDC146Q8IYE0 955 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms