RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 MAP3K15Q6ZN16 1313 aa19.87■□□□□ 0.77
SS18-216ENST00000580751 POLD1P28340 1107 aa19.87■□□□□ 0.77
SS18-216ENST00000580751 TTLL7Q6ZT98 887 aa19.87■□□□□ 0.77
SS18-216ENST00000580751 COPS6Q7L5N1 327 aa19.87■□□□□ 0.77
SS18-216ENST00000580751 ATF5Q9Y2D1 282 aaPredicted RBP19.87■□□□□ 0.77
SS18-216ENST00000580751 ERVV-1B6SEH8 477 aa19.86■□□□□ 0.77
SS18-216ENST00000580751 SLC4A2P04920 1241 aa19.86■□□□□ 0.77
SS18-216ENST00000580751 AIMP1Q12904 312 aaKnown RBP19.86■□□□□ 0.77
SS18-216ENST00000580751 FKBP8Q14318 412 aa19.86■□□□□ 0.77
SS18-216ENST00000580751 CLEC4GQ6UXB4 293 aa19.86■□□□□ 0.77
SS18-216ENST00000580751 LRP5O75197 1615 aa19.86■□□□□ 0.77
SS18-216ENST00000580751 TCERG1O14776 1098 aaKnown RBP19.85■□□□□ 0.77
SS18-216ENST00000580751 BCL2L12Q9HB09 334 aa19.85■□□□□ 0.77
SS18-216ENST00000580751 SRCAPQ6ZRS2 3230 aa19.85■□□□□ 0.77
SS18-216ENST00000580751 ZBTB3Q9H5J0 574 aa19.84■□□□□ 0.77
SS18-216ENST00000580751 DDX58O95786 925 aaKnown RBP19.83■□□□□ 0.77
SS18-216ENST00000580751 MMP10P09238 476 aa19.83■□□□□ 0.77
SS18-216ENST00000580751 PTGER2P43116 358 aa19.83■□□□□ 0.77
SS18-216ENST00000580751 ALDH1L2Q3SY69 923 aa19.83■□□□□ 0.77
SS18-216ENST00000580751 PLBD2Q8NHP8 589 aa19.83■□□□□ 0.77
SS18-216ENST00000580751 SGIP1Q9BQI5 828 aa19.83■□□□□ 0.77
SS18-216ENST00000580751 PHAXQ9H814 394 aaKnown RBP19.83■□□□□ 0.77
SS18-216ENST00000580751 ANKRD13DQ6ZTN6 518 aa19.82■□□□□ 0.76
SS18-216ENST00000580751 ATP10DQ9P241 1426 aa19.82■□□□□ 0.76
SS18-216ENST00000580751 FLIIQ13045 1269 aa19.81■□□□□ 0.76
SS18-216ENST00000580751 NFIXQ14938 502 aa19.81■□□□□ 0.76
SS18-216ENST00000580751 HSP90AB3PQ58FF7 597 aa19.81■□□□□ 0.76
SS18-216ENST00000580751 GIGYF2Q6Y7W6 1299 aaKnown RBP19.81■□□□□ 0.76
SS18-216ENST00000580751 CARMIL3Q8ND23 1372 aa19.81■□□□□ 0.76
SS18-216ENST00000580751 NUP98P52948 1817 aa19.81■□□□□ 0.76
SS18-216ENST00000580751 TM4SF1P30408 202 aa19.8■□□□□ 0.76
SS18-216ENST00000580751 HLFQ16534 295 aa19.8■□□□□ 0.76
SS18-216ENST00000580751 TBC1D9BQ66K14 1250 aa19.8■□□□□ 0.76
SS18-216ENST00000580751 SSH1Q8WYL5 1049 aa19.8■□□□□ 0.76
SS18-216ENST00000580751 SMC4Q9NTJ3 1288 aa19.8■□□□□ 0.76
SS18-216ENST00000580751 PARP3Q9Y6F1 533 aa19.8■□□□□ 0.76
SS18-216ENST00000580751 BICDL1Q6ZP65 573 aa19.79■□□□□ 0.76
SS18-216ENST00000580751 G2E3Q7L622 706 aa19.79■□□□□ 0.76
SS18-216ENST00000580751 RIC3Q7Z5B4 369 aa19.79■□□□□ 0.76
SS18-216ENST00000580751 SETDB2Q96T68 719 aa19.79■□□□□ 0.76
SS18-216ENST00000580751 RCAN3Q9UKA8 241 aa19.79■□□□□ 0.76
SS18-216ENST00000580751 ARFGEF2Q9Y6D5 1785 aa19.79■□□□□ 0.76
SS18-216ENST00000580751 ANKRD36CQ5JPF3 1778 aa19.78■□□□□ 0.76
SS18-216ENST00000580751 DDR1Q08345 913 aa19.78■□□□□ 0.76
SS18-216ENST00000580751 FKBP5Q13451 457 aaPredicted RBP19.78■□□□□ 0.76
SS18-216ENST00000580751 KSR2Q6VAB6 950 aa19.78■□□□□ 0.76
SS18-216ENST00000580751 MRPL50Q8N5N7 158 aaKnown RBP19.78■□□□□ 0.76
SS18-216ENST00000580751 PPP1R1BQ9UD71 204 aaPredicted RBP19.78■□□□□ 0.76
SS18-216ENST00000580751 NIP7Q9Y221 180 aaKnown RBP eCLIP19.78■□□□□ 0.76
SS18-216ENST00000580751 POLRMTO00411 1230 aaKnown RBP19.77■□□□□ 0.76
SS18-216ENST00000580751 RARSP54136 660 aaKnown RBP19.77■□□□□ 0.76
SS18-216ENST00000580751 BCL2L13Q9BXK5 485 aa19.77■□□□□ 0.76
SS18-216ENST00000580751 ADCY9O60503 1353 aa19.76■□□□□ 0.75
SS18-216ENST00000580751 PI4KAP2A4QPH2 592 aa19.76■□□□□ 0.75
SS18-216ENST00000580751 TCIRG1Q13488 830 aa19.76■□□□□ 0.75
SS18-216ENST00000580751 PI4KAP1Q8N8J0 262 aa19.76■□□□□ 0.75
SS18-216ENST00000580751 PTPRCP08575 1304 aa19.76■□□□□ 0.75
SS18-216ENST00000580751 IBTKQ9P2D0 1353 aaPredicted RBP19.75■□□□□ 0.75
SS18-216ENST00000580751 BRPF1P55201 1214 aaPredicted RBP19.75■□□□□ 0.75
SS18-216ENST00000580751 PARP10Q53GL7 1025 aa19.75■□□□□ 0.75
SS18-216ENST00000580751 ZNF34Q8IZ26 560 aa19.75■□□□□ 0.75
SS18-216ENST00000580751 MAP3K2Q9Y2U5 619 aa19.75■□□□□ 0.75
SS18-216ENST00000580751 NRXN2Q9P2S2 1712 aa19.75■□□□□ 0.75
SS18-216ENST00000580751 RNF123Q5XPI4 1314 aa19.75■□□□□ 0.75
SS18-216ENST00000580751 KIF16BQ96L93 1317 aa19.75■□□□□ 0.75
SS18-216ENST00000580751 SERPINB2P05120 415 aa19.74■□□□□ 0.75
SS18-216ENST00000580751 GPTP24298 496 aa19.74■□□□□ 0.75
SS18-216ENST00000580751 NEXNQ0ZGT2 675 aa19.73■□□□□ 0.75
SS18-216ENST00000580751 NBPF5PQ86XG9 351 aaPredicted RBP19.73■□□□□ 0.75
SS18-216ENST00000580751 METTL22Q9BUU2 404 aaPredicted RBP19.73■□□□□ 0.75
SS18-216ENST00000580751 C10orf71Q711Q0 1435 aa19.73■□□□□ 0.75
SS18-216ENST00000580751 UBN2Q6ZU65 1347 aa19.73■□□□□ 0.75
SS18-216ENST00000580751 AFDNP55196 1824 aaKnown RBP19.72■□□□□ 0.75
SS18-216ENST00000580751 NPHP1O15259 732 aa19.72■□□□□ 0.75
SS18-216ENST00000580751 CNBD1Q8NA66 436 aa19.72■□□□□ 0.75
SS18-216ENST00000580751 DNAAF4Q8WXU2 420 aa19.72■□□□□ 0.75
SS18-216ENST00000580751 MYD88Q99836 296 aa19.72■□□□□ 0.75
SS18-216ENST00000580751 ISCA1Q9BUE6 129 aa19.72■□□□□ 0.75
SS18-216ENST00000580751 NYXQ9GZU5 481 aa19.72■□□□□ 0.75
SS18-216ENST00000580751 TRIM28Q13263 835 aaKnown RBP19.71■□□□□ 0.75
SS18-216ENST00000580751 TPTE2Q6XPS3 522 aa19.71■□□□□ 0.75
SS18-216ENST00000580751 PPP1R42Q7Z4L9 355 aa19.71■□□□□ 0.75
SS18-216ENST00000580751 ST5P78524 1137 aa19.7■□□□□ 0.74
SS18-216ENST00000580751 PRR5LQ6MZQ0 368 aa19.7■□□□□ 0.74
SS18-216ENST00000580751 NLRP10Q86W26 655 aa19.7■□□□□ 0.74
SS18-216ENST00000580751 CD2APQ9Y5K6 639 aa19.7■□□□□ 0.74
SS18-216ENST00000580751 ATP5J2-PTCD1G3V325 749 aa19.69■□□□□ 0.74
SS18-216ENST00000580751 SUSD4Q5VX71 490 aa19.69■□□□□ 0.74
SS18-216ENST00000580751 KLHL34Q8N239 644 aa19.69■□□□□ 0.74
SS18-216ENST00000580751 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.69■□□□□ 0.74
SS18-216ENST00000580751 UTP14AQ9BVJ6 771 aaKnown RBP19.69■□□□□ 0.74
SS18-216ENST00000580751 KIF13BQ9NQT8 1826 aa19.69■□□□□ 0.74
SS18-216ENST00000580751 PXDNLA1KZ92 1463 aa19.68■□□□□ 0.74
SS18-216ENST00000580751 FAM177BA6PVY3 158 aa19.68■□□□□ 0.74
SS18-216ENST00000580751 F6X3S4 739 aa19.68■□□□□ 0.74
SS18-216ENST00000580751 IPO8O15397 1037 aaKnown RBP19.68■□□□□ 0.74
SS18-216ENST00000580751 BCAR3O75815 825 aa19.68■□□□□ 0.74
SS18-216ENST00000580751 GTF2E1P29083 439 aaPredicted RBP19.68■□□□□ 0.74
SS18-216ENST00000580751 CCDC191Q8NCU4 936 aa19.68■□□□□ 0.74
SS18-216ENST00000580751 ARHGAP45Q92619 1136 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms