RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 USP16Q9Y5T5 823 aa32.58■■■□□ 2.81
CDC42EP4-205ENST00000580315 GLTPD2A6NH11 291 aa32.57■■■□□ 2.8
CDC42EP4-205ENST00000580315 NFKBIEO00221 500 aa32.57■■■□□ 2.8
CDC42EP4-205ENST00000580315 A1BGP04217 495 aa32.57■■■□□ 2.8
CDC42EP4-205ENST00000580315 BRIP1Q9BX63 1249 aa32.57■■■□□ 2.8
CDC42EP4-205ENST00000580315 SMC1BQ8NDV3 1235 aa32.56■■■□□ 2.8
CDC42EP4-205ENST00000580315 PRAMEF22A3QJZ6 481 aa32.55■■■□□ 2.8
CDC42EP4-205ENST00000580315 PDE6BP35913 854 aa32.55■■■□□ 2.8
CDC42EP4-205ENST00000580315 PRR5LQ6MZQ0 368 aa32.55■■■□□ 2.8
CDC42EP4-205ENST00000580315 KLRG1Q96E93 195 aa32.55■■■□□ 2.8
CDC42EP4-205ENST00000580315 BABAM1Q9NWV8 329 aa32.55■■■□□ 2.8
CDC42EP4-205ENST00000580315 TSPYL4Q9UJ04 414 aa32.55■■■□□ 2.8
CDC42EP4-205ENST00000580315 PDZRN3Q9UPQ7 1066 aa32.55■■■□□ 2.8
CDC42EP4-205ENST00000580315 VEGFAP15692 232 aaPredicted RBP32.54■■■□□ 2.8
CDC42EP4-205ENST00000580315 CCDC24Q8N4L8 307 aa32.54■■■□□ 2.8
CDC42EP4-205ENST00000580315 ZNF622Q969S3 477 aaKnown RBP eCLIP32.54■■■□□ 2.8
CDC42EP4-205ENST00000580315 EIF4A1P60842 406 aaKnown RBP32.53■■■□□ 2.8
CDC42EP4-205ENST00000580315 SCN7AQ01118 1682 aa32.53■■■□□ 2.8
CDC42EP4-205ENST00000580315 CCDC184Q52MB2 194 aa32.52■■■□□ 2.8
CDC42EP4-205ENST00000580315 CAMTA2O94983 1202 aa32.51■■■□□ 2.79
CDC42EP4-205ENST00000580315 MRS2Q9HD23 443 aa32.51■■■□□ 2.79
CDC42EP4-205ENST00000580315 TRIM35Q9UPQ4 493 aa32.51■■■□□ 2.79
CDC42EP4-205ENST00000580315 C21orf2O43822 256 aa32.5■■■□□ 2.79
CDC42EP4-205ENST00000580315 JMYQ8N9B5 988 aa32.5■■■□□ 2.79
CDC42EP4-205ENST00000580315 SETDB2Q96T68 719 aa32.5■■■□□ 2.79
CDC42EP4-205ENST00000580315 ANKRD31Q8N7Z5 1873 aa32.5■■■□□ 2.79
CDC42EP4-205ENST00000580315 KDM3BQ7LBC6 1761 aa32.5■■■□□ 2.79
CDC42EP4-205ENST00000580315 APAF1O14727 1248 aa32.48■■■□□ 2.79
CDC42EP4-205ENST00000580315 CNBD1Q8NA66 436 aa32.48■■■□□ 2.79
CDC42EP4-205ENST00000580315 ZNF219Q9P2Y4 722 aaPredicted RBP32.48■■■□□ 2.79
CDC42EP4-205ENST00000580315 DZIP3Q86Y13 1208 aaKnown RBP32.47■■■□□ 2.79
CDC42EP4-205ENST00000580315 PIP4K2AP48426 406 aaPredicted RBP32.46■■■□□ 2.79
CDC42EP4-205ENST00000580315 TIAM2Q8IVF5 1701 aa32.45■■■□□ 2.78
CDC42EP4-205ENST00000580315 POTECB2RU33 542 aa32.44■■■□□ 2.78
CDC42EP4-205ENST00000580315 NPHP1O15259 732 aa32.44■■■□□ 2.78
CDC42EP4-205ENST00000580315 DPY19L2Q6NUT2 758 aa32.44■■■□□ 2.78
CDC42EP4-205ENST00000580315 COL11A2P13942 1736 aaPredicted RBP32.43■■■□□ 2.78
CDC42EP4-205ENST00000580315 ERFEQ4G0M1 354 aa32.43■■■□□ 2.78
CDC42EP4-205ENST00000580315 LAS1LQ9Y4W2 734 aaKnown RBP32.43■■■□□ 2.78
CDC42EP4-205ENST00000580315 CCDC88AQ3V6T2 1871 aa32.43■■■□□ 2.78
CDC42EP4-205ENST00000580315 PCNTO95613 3336 aa32.43■■■□□ 2.78
CDC42EP4-205ENST00000580315 NBPF26B4DH59 902 aa32.42■■■□□ 2.78
CDC42EP4-205ENST00000580315 SRGNP10124 158 aa32.42■■■□□ 2.78
CDC42EP4-205ENST00000580315 ST5P78524 1137 aa32.42■■■□□ 2.78
CDC42EP4-205ENST00000580315 STYK1Q6J9G0 422 aa32.42■■■□□ 2.78
CDC42EP4-205ENST00000580315 NBPF10Q6P3W6 841 aaKnown RBP32.42■■■□□ 2.78
CDC42EP4-205ENST00000580315 NBPF15Q8N660 670 aa32.42■■■□□ 2.78
CDC42EP4-205ENST00000580315 CNKSR1Q969H4 720 aa32.42■■■□□ 2.78
CDC42EP4-205ENST00000580315 CHL1O00533 1208 aa32.41■■■□□ 2.78
CDC42EP4-205ENST00000580315 CALD1Q05682 793 aaKnown RBP32.41■■■□□ 2.78
CDC42EP4-205ENST00000580315 CLEC4GQ6UXB4 293 aa32.4■■■□□ 2.78
CDC42EP4-205ENST00000580315 LTBP3Q9NS15 1303 aa32.4■■■□□ 2.78
CDC42EP4-205ENST00000580315 PRPF40BQ6NWY9 871 aaKnown RBP32.39■■■□□ 2.78
CDC42EP4-205ENST00000580315 TAOK3Q9H2K8 898 aa32.39■■■□□ 2.78
CDC42EP4-205ENST00000580315 LAMB4A4D0S4 1761 aa32.39■■■□□ 2.78
CDC42EP4-205ENST00000580315 FER1L6Q2WGJ9 1857 aa32.38■■■□□ 2.77
CDC42EP4-205ENST00000580315 MASTLQ96GX5 879 aa32.38■■■□□ 2.77
CDC42EP4-205ENST00000580315 ZNF652Q9Y2D9 606 aa32.38■■■□□ 2.77
CDC42EP4-205ENST00000580315 CFAP44Q96MT7 982 aa32.37■■■□□ 2.77
CDC42EP4-205ENST00000580315 BCORQ6W2J9 1755 aa32.37■■■□□ 2.77
CDC42EP4-205ENST00000580315 ERBB4Q15303 1308 aa32.36■■■□□ 2.77
CDC42EP4-205ENST00000580315 NBPF5PQ86XG9 351 aaPredicted RBP32.36■■■□□ 2.77
CDC42EP4-205ENST00000580315 SOGA3Q5TF21 947 aa32.34■■■□□ 2.77
CDC42EP4-205ENST00000580315 SLX4Q8IY92 1834 aa32.34■■■□□ 2.77
CDC42EP4-205ENST00000580315 RGL2O15211 777 aa32.33■■■□□ 2.77
CDC42EP4-205ENST00000580315 EIF2S2P20042 333 aaKnown RBP32.33■■■□□ 2.77
CDC42EP4-205ENST00000580315 COL13A1Q5TAT6 717 aaPredicted RBP32.33■■■□□ 2.77
CDC42EP4-205ENST00000580315 MYL6BP14649 208 aa32.32■■■□□ 2.76
CDC42EP4-205ENST00000580315 NGEFQ8N5V2 710 aa32.32■■■□□ 2.76
CDC42EP4-205ENST00000580315 IFT57Q9NWB7 429 aa32.32■■■□□ 2.76
CDC42EP4-205ENST00000580315 DICER1Q9UPY3 1922 aaKnown RBP32.32■■■□□ 2.76
CDC42EP4-205ENST00000580315 GNAI1P63096 354 aa32.31■■■□□ 2.76
CDC42EP4-205ENST00000580315 C7orf43Q8WVR3 580 aa32.31■■■□□ 2.76
CDC42EP4-205ENST00000580315 DDNO94850 711 aaPredicted RBP32.3■■■□□ 2.76
CDC42EP4-205ENST00000580315 KIF6Q6ZMV9 814 aa32.3■■■□□ 2.76
CDC42EP4-205ENST00000580315 KLRG2A4D1S0 409 aaPredicted RBP32.29■■■□□ 2.76
CDC42EP4-205ENST00000580315 TPTE2Q6XPS3 522 aa32.29■■■□□ 2.76
CDC42EP4-205ENST00000580315 NIP7Q9Y221 180 aaKnown RBP eCLIP32.29■■■□□ 2.76
CDC42EP4-205ENST00000580315 ZNF853P0CG23 659 aa32.28■■■□□ 2.76
CDC42EP4-205ENST00000580315 NPR1P16066 1061 aa32.28■■■□□ 2.76
CDC42EP4-205ENST00000580315 MBIPQ9NS73 344 aa32.28■■■□□ 2.76
CDC42EP4-205ENST00000580315 CCDC27Q2M243 656 aa32.27■■■□□ 2.76
CDC42EP4-205ENST00000580315 ERVV-1B6SEH8 477 aa32.26■■■□□ 2.75
CDC42EP4-205ENST00000580315 HOXB7P09629 217 aa32.26■■■□□ 2.75
CDC42EP4-205ENST00000580315 CCDC93Q567U6 631 aa32.26■■■□□ 2.75
CDC42EP4-205ENST00000580315 ARFGEF2Q9Y6D5 1785 aa32.25■■■□□ 2.75
CDC42EP4-205ENST00000580315 KRT24Q2M2I5 525 aa32.25■■■□□ 2.75
CDC42EP4-205ENST00000580315 NCBP3Q53F19 620 aaKnown RBP32.25■■■□□ 2.75
CDC42EP4-205ENST00000580315 CHADLQ6NUI6 762 aa32.25■■■□□ 2.75
CDC42EP4-205ENST00000580315 CACNA1SQ13698 1873 aa32.25■■■□□ 2.75
CDC42EP4-205ENST00000580315 FAM9BQ8IZU0 186 aa32.24■■■□□ 2.75
CDC42EP4-205ENST00000580315 MAP3K15Q6ZN16 1313 aa32.24■■■□□ 2.75
CDC42EP4-205ENST00000580315 FAM177BA6PVY3 158 aa32.23■■■□□ 2.75
CDC42EP4-205ENST00000580315 POTEIP0CG38 1075 aa32.23■■■□□ 2.75
CDC42EP4-205ENST00000580315 POTEJP0CG39 1038 aa32.23■■■□□ 2.75
CDC42EP4-205ENST00000580315 HLFQ16534 295 aa32.23■■■□□ 2.75
CDC42EP4-205ENST00000580315 TTLL7Q6ZT98 887 aa32.23■■■□□ 2.75
CDC42EP4-205ENST00000580315 NECTIN2Q92692 538 aa32.23■■■□□ 2.75
CDC42EP4-205ENST00000580315 PDIA6Q15084 440 aa32.22■■■□□ 2.75
CDC42EP4-205ENST00000580315 HDGFL1Q5TGJ6 251 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms