RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 POTECB2RU33 542 aa4.66□□□□□ -1.66
CDH19-204ENST00000579658 NBPF15Q8N660 670 aa4.66□□□□□ -1.66
CDH19-204ENST00000579658 COG3Q96JB2 828 aa4.66□□□□□ -1.66
CDH19-204ENST00000579658 AFDNP55196 1824 aaKnown RBP4.66□□□□□ -1.66
CDH19-204ENST00000579658 NME9Q86XW9 330 aa4.66□□□□□ -1.66
CDH19-204ENST00000579658 PIGBQ92521 554 aa4.66□□□□□ -1.66
CDH19-204ENST00000579658 HHIPL1Q96JK4 782 aa4.66□□□□□ -1.66
CDH19-204ENST00000579658 MCOLN1Q9GZU1 580 aa4.66□□□□□ -1.66
CDH19-204ENST00000579658 A0A1W2PP64 1363 aa4.66□□□□□ -1.66
CDH19-204ENST00000579658 USP42Q9H9J4 1324 aaKnown RBP4.66□□□□□ -1.66
CDH19-204ENST00000579658 HSP90AB1P08238 724 aaKnown RBP4.65□□□□□ -1.66
CDH19-204ENST00000579658 RASSF7Q02833 373 aa4.65□□□□□ -1.66
CDH19-204ENST00000579658 AMIGO3Q86WK7 504 aa4.65□□□□□ -1.66
CDH19-204ENST00000579658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.65□□□□□ -1.66
CDH19-204ENST00000579658 ARHGEF1Q92888 912 aaKnown RBP4.65□□□□□ -1.66
CDH19-204ENST00000579658 SLC12A5Q9H2X9 1139 aa4.65□□□□□ -1.66
CDH19-204ENST00000579658 FLT4P35916 1363 aa4.65□□□□□ -1.66
CDH19-204ENST00000579658 ADAMTS7Q9UKP4 1686 aa4.65□□□□□ -1.66
CDH19-204ENST00000579658 ITGBL1O95965 494 aaPredicted RBP4.65□□□□□ -1.67
CDH19-204ENST00000579658 C7P10643 843 aa4.65□□□□□ -1.67
CDH19-204ENST00000579658 ITPK1Q13572 414 aa4.65□□□□□ -1.67
CDH19-204ENST00000579658 ZNF579Q8NAF0 562 aaKnown RBP4.65□□□□□ -1.67
CDH19-204ENST00000579658 LTV1Q96GA3 475 aaPredicted RBP4.65□□□□□ -1.67
CDH19-204ENST00000579658 POLR3GLQ9BT43 218 aa4.65□□□□□ -1.67
CDH19-204ENST00000579658 KIF20BQ96Q89 1820 aa4.65□□□□□ -1.67
CDH19-204ENST00000579658 ERVV-2B6SEH9 535 aa4.64□□□□□ -1.67
CDH19-204ENST00000579658 H0YIN7 160 aa4.64□□□□□ -1.67
CDH19-204ENST00000579658 CD44P16070 742 aaKnown RBP4.64□□□□□ -1.67
CDH19-204ENST00000579658 EIF4G2P78344 907 aaKnown RBP eCLIP4.64□□□□□ -1.67
CDH19-204ENST00000579658 ERFEQ4G0M1 354 aa4.64□□□□□ -1.67
CDH19-204ENST00000579658 PLCD3Q8N3E9 789 aa4.64□□□□□ -1.67
CDH19-204ENST00000579658 SLC39A7Q92504 469 aa4.64□□□□□ -1.67
CDH19-204ENST00000579658 TAF1DQ9H5J8 278 aaPredicted RBP4.64□□□□□ -1.67
CDH19-204ENST00000579658 TJP1Q07157 1748 aa4.64□□□□□ -1.67
CDH19-204ENST00000579658 POLRMTO00411 1230 aaKnown RBP4.64□□□□□ -1.67
CDH19-204ENST00000579658 CYP27B1O15528 508 aa4.64□□□□□ -1.67
CDH19-204ENST00000579658 TM4SF1P30408 202 aa4.64□□□□□ -1.67
CDH19-204ENST00000579658 IFNL2Q8IZJ0 200 aa4.64□□□□□ -1.67
CDH19-204ENST00000579658 TMC1Q8TDI8 760 aa4.64□□□□□ -1.67
CDH19-204ENST00000579658 CAPNS2Q96L46 248 aa4.64□□□□□ -1.67
CDH19-204ENST00000579658 SAGE1Q9NXZ1 904 aa4.64□□□□□ -1.67
CDH19-204ENST00000579658 HACL1Q9UJ83 578 aa4.64□□□□□ -1.67
CDH19-204ENST00000579658 BCORQ6W2J9 1755 aa4.64□□□□□ -1.67
CDH19-204ENST00000579658 NFKBIEO00221 500 aa4.63□□□□□ -1.67
CDH19-204ENST00000579658 DGKZQ13574 1117 aa4.63□□□□□ -1.67
CDH19-204ENST00000579658 NBPF6Q5VWK0 638 aa4.63□□□□□ -1.67
CDH19-204ENST00000579658 NBPF4Q96M43 638 aa4.63□□□□□ -1.67
CDH19-204ENST00000579658 TAOK3Q9H2K8 898 aa4.63□□□□□ -1.67
CDH19-204ENST00000579658 ABT1Q9ULW3 272 aaKnown RBP4.63□□□□□ -1.67
CDH19-204ENST00000579658 PDIA4P13667 645 aaKnown RBP4.63□□□□□ -1.67
CDH19-204ENST00000579658 CHRNA5P30532 468 aa4.63□□□□□ -1.67
CDH19-204ENST00000579658 PDE6BP35913 854 aa4.63□□□□□ -1.67
CDH19-204ENST00000579658 DDR1Q08345 913 aa4.63□□□□□ -1.67
CDH19-204ENST00000579658 ATG3Q9NT62 314 aa4.63□□□□□ -1.67
CDH19-204ENST00000579658 MYH14Q7Z406 1995 aaKnown RBP4.63□□□□□ -1.67
CDH19-204ENST00000579658 ZPR1O75312 459 aa4.62□□□□□ -1.67
CDH19-204ENST00000579658 PKN2Q16513 984 aaKnown RBP4.62□□□□□ -1.67
CDH19-204ENST00000579658 C2CD5Q86YS7 1000 aa4.62□□□□□ -1.67
CDH19-204ENST00000579658 MIER1Q8N108 512 aa4.62□□□□□ -1.67
CDH19-204ENST00000579658 SPDYE1Q8NFV5 336 aaPredicted RBP4.62□□□□□ -1.67
CDH19-204ENST00000579658 CNKSR1Q969H4 720 aa4.62□□□□□ -1.67
CDH19-204ENST00000579658 GPR101Q96P66 508 aaPredicted RBP4.62□□□□□ -1.67
CDH19-204ENST00000579658 RSPH6AQ9H0K4 717 aa4.62□□□□□ -1.67
CDH19-204ENST00000579658 TLL2Q9Y6L7 1015 aa4.62□□□□□ -1.67
CDH19-204ENST00000579658 UTRNP46939 3433 aa4.62□□□□□ -1.67
CDH19-204ENST00000579658 FBLN1P23142 703 aa4.62□□□□□ -1.67
CDH19-204ENST00000579658 STYK1Q6J9G0 422 aa4.62□□□□□ -1.67
CDH19-204ENST00000579658 CNTROBQ8N137 903 aa4.62□□□□□ -1.67
CDH19-204ENST00000579658 TMEM121BQ9BXQ6 578 aaPredicted RBP4.62□□□□□ -1.67
CDH19-204ENST00000579658 DDX21Q9NR30 783 aaKnown RBP eCLIP4.62□□□□□ -1.67
CDH19-204ENST00000579658 SCN7AQ01118 1682 aa4.62□□□□□ -1.67
CDH19-204ENST00000579658 ANKRD31Q8N7Z5 1873 aa4.62□□□□□ -1.67
CDH19-204ENST00000579658 A0A087WZG4 1122 aa4.61□□□□□ -1.67
CDH19-204ENST00000579658 PHKG2P15735 406 aa4.61□□□□□ -1.67
CDH19-204ENST00000579658 EPHX2P34913 555 aa4.61□□□□□ -1.67
CDH19-204ENST00000579658 GRIPAP1Q4V328 841 aa4.61□□□□□ -1.67
CDH19-204ENST00000579658 ZNF428Q96B54 188 aa4.61□□□□□ -1.67
CDH19-204ENST00000579658 CARD14Q9BXL6 1004 aa4.61□□□□□ -1.67
CDH19-204ENST00000579658 ASAP1Q9ULH1 1129 aa4.61□□□□□ -1.67
CDH19-204ENST00000579658 CLEC11AQ9Y240 323 aa4.61□□□□□ -1.67
CDH19-204ENST00000579658 KIF7Q2M1P5 1343 aa4.61□□□□□ -1.67
CDH19-204ENST00000579658 COL11A2P13942 1736 aaPredicted RBP4.61□□□□□ -1.67
CDH19-204ENST00000579658 BRIP1Q9BX63 1249 aa4.61□□□□□ -1.67
CDH19-204ENST00000579658 NARFQ9UHQ1 456 aa4.61□□□□□ -1.67
CDH19-204ENST00000579658 RBBP6Q7Z6E9 1792 aaKnown RBP4.61□□□□□ -1.67
CDH19-204ENST00000579658 DDNO94850 711 aaPredicted RBP4.6□□□□□ -1.67
CDH19-204ENST00000579658 LMOD1P29536 600 aaPredicted RBP4.6□□□□□ -1.67
CDH19-204ENST00000579658 NOGQ13253 232 aa4.6□□□□□ -1.67
CDH19-204ENST00000579658 HABP4Q5JVS0 413 aaKnown RBP4.6□□□□□ -1.67
CDH19-204ENST00000579658 SERPINB2P05120 415 aa4.6□□□□□ -1.67
CDH19-204ENST00000579658 CRKLP46109 303 aaKnown RBP4.6□□□□□ -1.67
CDH19-204ENST00000579658 CCDC93Q567U6 631 aa4.6□□□□□ -1.67
CDH19-204ENST00000579658 EAPPQ56P03 285 aaPredicted RBP4.6□□□□□ -1.67
CDH19-204ENST00000579658 AKAP4Q5JQC9 854 aa4.6□□□□□ -1.67
CDH19-204ENST00000579658 USP50Q70EL3 339 aaPredicted RBP4.6□□□□□ -1.67
CDH19-204ENST00000579658 SMIM5Q71RC9 77 aa4.6□□□□□ -1.67
CDH19-204ENST00000579658 GPC2Q8N158 579 aa4.6□□□□□ -1.67
CDH19-204ENST00000579658 AKAP11Q9UKA4 1901 aa4.6□□□□□ -1.67
CDH19-204ENST00000579658 SOS1Q07889 1333 aaPredicted RBP4.6□□□□□ -1.67
CDH19-204ENST00000579658 PDE4DIPQ5VU43 2346 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms