RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 COL19A1Q14993 1142 aa7.76□□□□□ -1.17
DDX42-210ENST00000579539 NLRP3Q96P20 1036 aa7.76□□□□□ -1.17
DDX42-210ENST00000579539 PCDHGA11Q9Y5H2 935 aa7.76□□□□□ -1.17
DDX42-210ENST00000579539 WASHC2AQ641Q2 1341 aa7.76□□□□□ -1.17
DDX42-210ENST00000579539 WASHC2CQ9Y4E1 1318 aa7.76□□□□□ -1.17
DDX42-210ENST00000579539 ANP32CO43423 234 aa7.75□□□□□ -1.17
DDX42-210ENST00000579539 MRPL58Q14197 206 aaKnown RBP7.75□□□□□ -1.17
DDX42-210ENST00000579539 ZSCAN29Q8IWY8 852 aaPredicted RBP7.75□□□□□ -1.17
DDX42-210ENST00000579539 UBXN4Q92575 508 aa7.75□□□□□ -1.17
DDX42-210ENST00000579539 RAB6BQ9NRW1 208 aa7.75□□□□□ -1.17
DDX42-210ENST00000579539 CUEDC1Q9NWM3 386 aaPredicted RBP7.75□□□□□ -1.17
DDX42-210ENST00000579539 MYCP01106 439 aaPredicted RBP7.74□□□□□ -1.17
DDX42-210ENST00000579539 IL2RAP01589 272 aa7.74□□□□□ -1.17
DDX42-210ENST00000579539 P4HBP07237 508 aaKnown RBP7.74□□□□□ -1.17
DDX42-210ENST00000579539 WEE1P30291 646 aa7.74□□□□□ -1.17
DDX42-210ENST00000579539 FKBP4Q02790 459 aaKnown RBP eCLIP7.74□□□□□ -1.17
DDX42-210ENST00000579539 POU4F2Q12837 409 aa7.74□□□□□ -1.17
DDX42-210ENST00000579539 USP4Q13107 963 aa7.74□□□□□ -1.17
DDX42-210ENST00000579539 SF3B2Q13435 895 aaKnown RBP7.74□□□□□ -1.17
DDX42-210ENST00000579539 EAPPQ56P03 285 aaPredicted RBP7.74□□□□□ -1.17
DDX42-210ENST00000579539 SV2AQ7L0J3 742 aa7.74□□□□□ -1.17
DDX42-210ENST00000579539 CNKSR1Q969H4 720 aa7.74□□□□□ -1.17
DDX42-210ENST00000579539 COL25A1Q9BXS0 654 aaPredicted RBP7.74□□□□□ -1.17
DDX42-210ENST00000579539 HRH3Q9Y5N1 445 aa7.74□□□□□ -1.17
DDX42-210ENST00000579539 CEP162Q5TB80 1403 aa7.73□□□□□ -1.17
DDX42-210ENST00000579539 CDC14CA4D256 554 aa7.73□□□□□ -1.17
DDX42-210ENST00000579539 SMARCA5O60264 1052 aaPredicted RBP7.73□□□□□ -1.17
DDX42-210ENST00000579539 HDLBPQ00341 1268 aaKnown RBP7.73□□□□□ -1.17
DDX42-210ENST00000579539 CENPCQ03188 943 aa7.73□□□□□ -1.17
DDX42-210ENST00000579539 PSME1Q06323 249 aa7.73□□□□□ -1.17
DDX42-210ENST00000579539 SLC27A3Q5K4L6 730 aa7.73□□□□□ -1.17
DDX42-210ENST00000579539 RNFT1Q5M7Z0 435 aa7.73□□□□□ -1.17
DDX42-210ENST00000579539 LDLRAD1Q5T700 205 aa7.73□□□□□ -1.17
DDX42-210ENST00000579539 CNTNAP3BQ96NU0 1288 aa7.73□□□□□ -1.17
DDX42-210ENST00000579539 ESYT1Q9BSJ8 1104 aa7.73□□□□□ -1.17
DDX42-210ENST00000579539 BACH2Q9BYV9 841 aa7.73□□□□□ -1.17
DDX42-210ENST00000579539 CNTNAP3Q9BZ76 1288 aa7.73□□□□□ -1.17
DDX42-210ENST00000579539 SPATA31C2B4DYI2 1134 aa7.72□□□□□ -1.17
DDX42-210ENST00000579539 ERCC5P28715 1186 aaPredicted RBP7.72□□□□□ -1.17
DDX42-210ENST00000579539 SF3A1Q15459 793 aaKnown RBP7.72□□□□□ -1.17
DDX42-210ENST00000579539 TSEN2Q8NCE0 465 aaKnown RBP7.72□□□□□ -1.17
DDX42-210ENST00000579539 XAGE2Q96GT9 111 aa7.72□□□□□ -1.17
DDX42-210ENST00000579539 SPATA32Q96LK8 384 aa7.72□□□□□ -1.17
DDX42-210ENST00000579539 HINFPQ9BQA5 517 aa7.72□□□□□ -1.17
DDX42-210ENST00000579539 STAU1O95793 577 aaKnown RBP7.71□□□□□ -1.18
DDX42-210ENST00000579539 WDR44Q5JSH3 913 aa7.71□□□□□ -1.18
DDX42-210ENST00000579539 NBPF10Q6P3W6 841 aaKnown RBP7.71□□□□□ -1.18
DDX42-210ENST00000579539 TMC7Q7Z402 723 aa7.71□□□□□ -1.18
DDX42-210ENST00000579539 NBPF15Q8N660 670 aa7.71□□□□□ -1.18
DDX42-210ENST00000579539 GAS2L2Q8NHY3 880 aa7.71□□□□□ -1.18
DDX42-210ENST00000579539 HELQQ8TDG4 1101 aa7.71□□□□□ -1.18
DDX42-210ENST00000579539 DYRK1BQ9Y463 629 aa7.71□□□□□ -1.18
DDX42-210ENST00000579539 ABCC9O60706 1549 aa7.71□□□□□ -1.18
DDX42-210ENST00000579539 FAM181BA6NEQ2 426 aa7.7□□□□□ -1.18
DDX42-210ENST00000579539 FHDC1Q9C0D6 1143 aaPredicted RBP7.7□□□□□ -1.18
DDX42-210ENST00000579539 PPP1R1BQ9UD71 204 aaPredicted RBP7.7□□□□□ -1.18
DDX42-210ENST00000579539 M0R2N6 131 aa7.69□□□□□ -1.18
DDX42-210ENST00000579539 SCAMP3O14828 347 aaKnown RBP7.69□□□□□ -1.18
DDX42-210ENST00000579539 PTCD1O75127 700 aaKnown RBP7.69□□□□□ -1.18
DDX42-210ENST00000579539 NPR3P17342 541 aa7.69□□□□□ -1.18
DDX42-210ENST00000579539 FMR1Q06787 632 aaKnown RBP eCLIP7.69□□□□□ -1.18
DDX42-210ENST00000579539 RAD51AP2Q09MP3 1159 aa7.69□□□□□ -1.18
DDX42-210ENST00000579539 DBN1Q16643 649 aa7.69□□□□□ -1.18
DDX42-210ENST00000579539 C9orf131Q5VYM1 1079 aa7.69□□□□□ -1.18
DDX42-210ENST00000579539 TRIM22Q8IYM9 498 aa7.69□□□□□ -1.18
DDX42-210ENST00000579539 FAM43AQ8N2R8 423 aa7.69□□□□□ -1.18
DDX42-210ENST00000579539 RBCK1Q9BYM8 510 aa7.69□□□□□ -1.18
DDX42-210ENST00000579539 ETNK1Q9HBU6 452 aa7.69□□□□□ -1.18
DDX42-210ENST00000579539 WASLO00401 505 aaPredicted RBP7.68□□□□□ -1.18
DDX42-210ENST00000579539 NAA30Q147X3 362 aaPredicted RBP7.68□□□□□ -1.18
DDX42-210ENST00000579539 ESCO1Q5FWF5 840 aa7.68□□□□□ -1.18
DDX42-210ENST00000579539 COL26A1Q96A83 441 aa7.68□□□□□ -1.18
DDX42-210ENST00000579539 ZNF837Q96EG3 531 aaPredicted RBP7.68□□□□□ -1.18
DDX42-210ENST00000579539 DHX57Q6P158 1386 aaKnown RBP7.68□□□□□ -1.18
DDX42-210ENST00000579539 TREHO43280 583 aa7.67□□□□□ -1.18
DDX42-210ENST00000579539 GAS6Q14393 721 aa7.67□□□□□ -1.18
DDX42-210ENST00000579539 RIPOR1Q6ZS17 1223 aa7.67□□□□□ -1.18
DDX42-210ENST00000579539 PIK3R5Q8WYR1 880 aa7.67□□□□□ -1.18
DDX42-210ENST00000579539 GMCL1Q96IK5 515 aa7.67□□□□□ -1.18
DDX42-210ENST00000579539 ZSCAN10Q96SZ4 725 aaPredicted RBP7.67□□□□□ -1.18
DDX42-210ENST00000579539 GAS2L1Q99501 681 aaPredicted RBP7.67□□□□□ -1.18
DDX42-210ENST00000579539 TIMMDC1Q9NPL8 285 aa7.67□□□□□ -1.18
DDX42-210ENST00000579539 SLURP2P0DP57 97 aa7.66□□□□□ -1.18
DDX42-210ENST00000579539 MPSTP25325 297 aa7.66□□□□□ -1.18
DDX42-210ENST00000579539 CANXP27824 592 aaKnown RBP7.66□□□□□ -1.18
DDX42-210ENST00000579539 ITGAEP38570 1179 aa7.66□□□□□ -1.18
DDX42-210ENST00000579539 SCNN1DP51172 638 aa7.66□□□□□ -1.18
DDX42-210ENST00000579539 METTL16Q86W50 562 aaKnown RBP7.66□□□□□ -1.18
DDX42-210ENST00000579539 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.66□□□□□ -1.18
DDX42-210ENST00000579539 FAM161BQ96MY7 647 aa7.66□□□□□ -1.18
DDX42-210ENST00000579539 ZNF358Q9NW07 568 aa7.66□□□□□ -1.18
DDX42-210ENST00000579539 RRP9O43818 475 aaKnown RBP7.65□□□□□ -1.18
DDX42-210ENST00000579539 F11P03951 625 aa7.65□□□□□ -1.18
DDX42-210ENST00000579539 PHKA2P46019 1235 aa7.65□□□□□ -1.18
DDX42-210ENST00000579539 TINF2Q9BSI4 451 aa7.65□□□□□ -1.18
DDX42-210ENST00000579539 RNF19AQ9NV58 838 aa7.65□□□□□ -1.18
DDX42-210ENST00000579539 H7C1W4 665 aa7.64□□□□□ -1.19
DDX42-210ENST00000579539 GPR25O00155 361 aa7.64□□□□□ -1.19
DDX42-210ENST00000579539 FOXO3O43524 673 aa7.64□□□□□ -1.19
DDX42-210ENST00000579539 FAM13AO94988 1023 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms