RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 MAGI3Q5TCQ9 1506 aa12.03□□□□□ -0.48
MSI2-209ENST00000579483 RARSP54136 660 aaKnown RBP12.03□□□□□ -0.48
MSI2-209ENST00000579483 LRRFIP2Q9Y608 721 aaKnown RBP12.03□□□□□ -0.48
MSI2-209ENST00000579483 NKTRP30414 1462 aaKnown RBP12.03□□□□□ -0.48
MSI2-209ENST00000579483 STK11IPQ8N1F8 1099 aa12.03□□□□□ -0.48
MSI2-209ENST00000579483 CCDC12Q8WUD4 166 aaPredicted RBP12.03□□□□□ -0.48
MSI2-209ENST00000579483 MBIPQ9NS73 344 aa12.03□□□□□ -0.48
MSI2-209ENST00000579483 PLEKHH1Q9ULM0 1364 aa12.03□□□□□ -0.48
MSI2-209ENST00000579483 FAM13BQ9NYF5 915 aa12.03□□□□□ -0.48
MSI2-209ENST00000579483 MAGEC2Q9UBF1 373 aaPredicted RBP12.03□□□□□ -0.48
MSI2-209ENST00000579483 ZFYP08048 801 aaPredicted RBP12.03□□□□□ -0.48
MSI2-209ENST00000579483 HOOK2Q96ED9 719 aa12.03□□□□□ -0.48
MSI2-209ENST00000579483 CEP131Q9UPN4 1083 aa12.03□□□□□ -0.48
MSI2-209ENST00000579483 MAP3K19Q56UN5 1328 aa12.02□□□□□ -0.48
MSI2-209ENST00000579483 CWC27Q6UX04 472 aaKnown RBP12.02□□□□□ -0.48
MSI2-209ENST00000579483 PTPRKQ15262 1439 aa12.02□□□□□ -0.48
MSI2-209ENST00000579483 IL15P40933 162 aaPredicted RBP12.02□□□□□ -0.49
MSI2-209ENST00000579483 NAP1L5Q96NT1 182 aaPredicted RBP12.02□□□□□ -0.49
MSI2-209ENST00000579483 SYCP1Q15431 976 aa12.02□□□□□ -0.49
MSI2-209ENST00000579483 ZNF213O14771 459 aa12.02□□□□□ -0.49
MSI2-209ENST00000579483 RNMTO43148 476 aaKnown RBP12.02□□□□□ -0.49
MSI2-209ENST00000579483 KIF5BP33176 963 aa12.02□□□□□ -0.49
MSI2-209ENST00000579483 IL27Q8NEV9 243 aa12.02□□□□□ -0.49
MSI2-209ENST00000579483 EYA1Q99502 592 aa12.02□□□□□ -0.49
MSI2-209ENST00000579483 RAB34Q9BZG1 259 aa12.02□□□□□ -0.49
MSI2-209ENST00000579483 ECHDC1Q9NTX5 307 aa12.02□□□□□ -0.49
MSI2-209ENST00000579483 LETM1O95202 739 aaPredicted RBP12.01□□□□□ -0.49
MSI2-209ENST00000579483 SLC39A6Q13433 755 aa12.01□□□□□ -0.49
MSI2-209ENST00000579483 LINS1Q8NG48 757 aa12.01□□□□□ -0.49
MSI2-209ENST00000579483 DACH1Q9UI36 760 aa12.01□□□□□ -0.49
MSI2-209ENST00000579483 COL17A1Q9UMD9 1497 aaPredicted RBP12.01□□□□□ -0.49
MSI2-209ENST00000579483 FILIP1LQ4L180 1135 aa12.01□□□□□ -0.49
MSI2-209ENST00000579483 NUTM1Q86Y26 1132 aa12.01□□□□□ -0.49
MSI2-209ENST00000579483 BOLA2Q9H3K6 86 aa12.01□□□□□ -0.49
MSI2-209ENST00000579483 F6X3S4 739 aa12.01□□□□□ -0.49
MSI2-209ENST00000579483 QTRT2Q9H974 415 aaKnown RBP12.01□□□□□ -0.49
MSI2-209ENST00000579483 PDRG1Q9NUG6 133 aa12.01□□□□□ -0.49
MSI2-209ENST00000579483 EFCAB6Q5THR3 1501 aa12.01□□□□□ -0.49
MSI2-209ENST00000579483 ARHGEF5Q12774 1597 aa12.01□□□□□ -0.49
MSI2-209ENST00000579483 H0YIN7 160 aa12.01□□□□□ -0.49
MSI2-209ENST00000579483 RANBP6O60518 1105 aaKnown RBP12.01□□□□□ -0.49
MSI2-209ENST00000579483 GOLGA6L1Q8N7Z2 621 aa12.01□□□□□ -0.49
MSI2-209ENST00000579483 EVI5LQ96CN4 794 aa12.01□□□□□ -0.49
MSI2-209ENST00000579483 POLR3AO14802 1390 aaPredicted RBP12.01□□□□□ -0.49
MSI2-209ENST00000579483 MYO5CQ9NQX4 1742 aa12□□□□□ -0.49
MSI2-209ENST00000579483 ATP2B3Q16720 1220 aa12□□□□□ -0.49
MSI2-209ENST00000579483 KDM5DQ9BY66 1539 aa12□□□□□ -0.49
MSI2-209ENST00000579483 CHPF2Q9P2E5 772 aa12□□□□□ -0.49
MSI2-209ENST00000579483 LTKP29376 864 aa12□□□□□ -0.49
MSI2-209ENST00000579483 EIF6P56537 245 aaKnown RBP12□□□□□ -0.49
MSI2-209ENST00000579483 CATIPQ7Z7H3 387 aa12□□□□□ -0.49
MSI2-209ENST00000579483 PHAXQ9H814 394 aaKnown RBP12□□□□□ -0.49
MSI2-209ENST00000579483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12□□□□□ -0.49
MSI2-209ENST00000579483 HOXB7P09629 217 aa12□□□□□ -0.49
MSI2-209ENST00000579483 DESP17661 470 aa12□□□□□ -0.49
MSI2-209ENST00000579483 MTHFSDQ2M296 383 aaKnown RBP12□□□□□ -0.49
MSI2-209ENST00000579483 FAM196AQ6ZSG2 479 aa12□□□□□ -0.49
MSI2-209ENST00000579483 GRM8O00222 908 aa11.99□□□□□ -0.49
MSI2-209ENST00000579483 MAP4K4O95819 1239 aaPredicted RBP11.99□□□□□ -0.49
MSI2-209ENST00000579483 JAKMIP1Q96N16 626 aaKnown RBP11.99□□□□□ -0.49
MSI2-209ENST00000579483 A0A1W2PP64 1363 aa11.99□□□□□ -0.49
MSI2-209ENST00000579483 UGGT1Q9NYU2 1555 aa11.99□□□□□ -0.49
MSI2-209ENST00000579483 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.99□□□□□ -0.49
MSI2-209ENST00000579483 MBD3O95983 291 aa11.99□□□□□ -0.49
MSI2-209ENST00000579483 NSFL1CQ9UNZ2 370 aaKnown RBP11.99□□□□□ -0.49
MSI2-209ENST00000579483 ADCY10Q96PN6 1610 aa11.99□□□□□ -0.49
MSI2-209ENST00000579483 PAF1Q8N7H5 531 aa11.99□□□□□ -0.49
MSI2-209ENST00000579483 SCLT1Q96NL6 688 aa11.99□□□□□ -0.49
MSI2-209ENST00000579483 BEGAINQ9BUH8 593 aa11.99□□□□□ -0.49
MSI2-209ENST00000579483 ERVV-2B6SEH9 535 aa11.98□□□□□ -0.49
MSI2-209ENST00000579483 IRS4O14654 1257 aaPredicted RBP11.98□□□□□ -0.49
MSI2-209ENST00000579483 CCDC8Q9H0W5 538 aaPredicted RBP11.98□□□□□ -0.49
MSI2-209ENST00000579483 KDM4AO75164 1064 aa11.98□□□□□ -0.49
MSI2-209ENST00000579483 KDM6BO15054 1643 aa11.98□□□□□ -0.49
MSI2-209ENST00000579483 MAST3O60307 1309 aa11.98□□□□□ -0.49
MSI2-209ENST00000579483 WDR33Q9C0J8 1336 aaKnown RBP11.98□□□□□ -0.49
MSI2-209ENST00000579483 FAM83GA6ND36 823 aa11.97□□□□□ -0.49
MSI2-209ENST00000579483 ZHX3Q9H4I2 956 aa11.97□□□□□ -0.49
MSI2-209ENST00000579483 CFAP45Q9UL16 551 aa11.97□□□□□ -0.49
MSI2-209ENST00000579483 ALDH1B1P30837 517 aa11.97□□□□□ -0.49
MSI2-209ENST00000579483 DHX8Q14562 1220 aaKnown RBP11.97□□□□□ -0.49
MSI2-209ENST00000579483 CERS3Q8IU89 383 aa11.97□□□□□ -0.49
MSI2-209ENST00000579483 DDX21Q9NR30 783 aaKnown RBP eCLIP11.97□□□□□ -0.49
MSI2-209ENST00000579483 SLC12A7Q9Y666 1083 aa11.97□□□□□ -0.49
MSI2-209ENST00000579483 SH3TC1Q8TE82 1336 aa11.97□□□□□ -0.49
MSI2-209ENST00000579483 TSPY2A6NKD2 308 aa11.97□□□□□ -0.49
MSI2-209ENST00000579483 CCDC173Q0VFZ6 552 aa11.97□□□□□ -0.49
MSI2-209ENST00000579483 TMEM87AQ8NBN3 555 aa11.97□□□□□ -0.49
MSI2-209ENST00000579483 PDCL3Q9H2J4 239 aa11.97□□□□□ -0.49
MSI2-209ENST00000579483 LUC7LQ9NQ29 371 aaKnown RBP11.96□□□□□ -0.49
MSI2-209ENST00000579483 BAG4O95429 457 aaKnown RBP11.96□□□□□ -0.49
MSI2-209ENST00000579483 PRIM1P49642 420 aaKnown RBP11.96□□□□□ -0.49
MSI2-209ENST00000579483 TMEM266Q2M3C6 531 aa11.96□□□□□ -0.49
MSI2-209ENST00000579483 LARP1BQ659C4 914 aaKnown RBP11.96□□□□□ -0.49
MSI2-209ENST00000579483 KAT14Q9H8E8 782 aa11.96□□□□□ -0.49
MSI2-209ENST00000579483 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.96□□□□□ -0.499e-7■■■■■ 26.9
MSI2-209ENST00000579483 KRT85P78386 507 aa11.96□□□□□ -0.5
MSI2-209ENST00000579483 NAA16Q6N069 864 aaPredicted RBP11.96□□□□□ -0.5
MSI2-209ENST00000579483 LMBR1LQ6UX01 489 aa11.96□□□□□ -0.5
MSI2-209ENST00000579483 TXLNBQ8N3L3 684 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms