RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 NUP188Q5SRE5 1749 aa17.56■□□□□ 0.4
TSEN54-206ENST00000579449 CCT4P50991 539 aaKnown RBP17.56■□□□□ 0.4
TSEN54-206ENST00000579449 EIF5P55010 431 aaKnown RBP17.56■□□□□ 0.4
TSEN54-206ENST00000579449 TXNRD1Q16881 649 aa17.56■□□□□ 0.4
TSEN54-206ENST00000579449 PROM2Q8N271 834 aa17.56■□□□□ 0.4
TSEN54-206ENST00000579449 PLBD2Q8NHP8 589 aa17.56■□□□□ 0.4
TSEN54-206ENST00000579449 DDX19BQ9UMR2 479 aa17.56■□□□□ 0.4
TSEN54-206ENST00000579449 RGPD3A6NKT7 1758 aaPredicted RBP17.56■□□□□ 0.4
TSEN54-206ENST00000579449 RGPD4Q7Z3J3 1758 aa17.56■□□□□ 0.4
TSEN54-206ENST00000579449 BEND3Q5T5X7 828 aa17.54■□□□□ 0.4
TSEN54-206ENST00000579449 NPM2Q86SE8 214 aaKnown RBP17.54■□□□□ 0.4
TSEN54-206ENST00000579449 ATP10DQ9P241 1426 aa17.54■□□□□ 0.4
TSEN54-206ENST00000579449 KIF6Q6ZMV9 814 aa17.53■□□□□ 0.4
TSEN54-206ENST00000579449 ARXQ96QS3 562 aa17.53■□□□□ 0.4
TSEN54-206ENST00000579449 METTL22Q9BUU2 404 aaPredicted RBP17.53■□□□□ 0.4
TSEN54-206ENST00000579449 ZBTB3Q9H5J0 574 aa17.53■□□□□ 0.4
TSEN54-206ENST00000579449 MAP3K15Q6ZN16 1313 aa17.52■□□□□ 0.4
TSEN54-206ENST00000579449 NUP98P52948 1817 aa17.52■□□□□ 0.4
TSEN54-206ENST00000579449 AFDNP55196 1824 aaKnown RBP17.52■□□□□ 0.4
TSEN54-206ENST00000579449 ZBTB7BO15156 539 aaPredicted RBP17.52■□□□□ 0.4
TSEN54-206ENST00000579449 RPS6KA4O75676 772 aa17.52■□□□□ 0.4
TSEN54-206ENST00000579449 DZIP3Q86Y13 1208 aaKnown RBP17.52■□□□□ 0.4
TSEN54-206ENST00000579449 MYD88Q99836 296 aa17.52■□□□□ 0.4
TSEN54-206ENST00000579449 SRCIN1Q9C0H9 1055 aa17.52■□□□□ 0.4
TSEN54-206ENST00000579449 PPP4R2Q9NY27 417 aa17.52■□□□□ 0.4
TSEN54-206ENST00000579449 COL15A1P39059 1388 aa17.52■□□□□ 0.39
TSEN54-206ENST00000579449 GNPATO15228 680 aa17.51■□□□□ 0.39
TSEN54-206ENST00000579449 SF3B2Q13435 895 aaKnown RBP17.51■□□□□ 0.39
TSEN54-206ENST00000579449 AK7Q96M32 723 aa17.51■□□□□ 0.39
TSEN54-206ENST00000579449 TBC1D2BQ9UPU7 963 aa17.51■□□□□ 0.39
TSEN54-206ENST00000579449 UBR3Q6ZT12 1888 aa17.5■□□□□ 0.39
TSEN54-206ENST00000579449 ALDH1L1O75891 902 aa17.5■□□□□ 0.39
TSEN54-206ENST00000579449 HMGB2P26583 209 aaKnown RBP17.5■□□□□ 0.39
TSEN54-206ENST00000579449 NEXNQ0ZGT2 675 aa17.5■□□□□ 0.39
TSEN54-206ENST00000579449 AAMPQ13685 434 aa17.5■□□□□ 0.39
TSEN54-206ENST00000579449 LINS1Q8NG48 757 aa17.5■□□□□ 0.39
TSEN54-206ENST00000579449 CHMP4BQ9H444 224 aaKnown RBP17.5■□□□□ 0.39
TSEN54-206ENST00000579449 ZBTB40Q9NUA8 1239 aa17.5■□□□□ 0.39
TSEN54-206ENST00000579449 RTCBQ9Y3I0 505 aaKnown RBP17.5■□□□□ 0.39
TSEN54-206ENST00000579449 A0A087WZG4 1122 aa17.49■□□□□ 0.39
TSEN54-206ENST00000579449 ERVV-1B6SEH8 477 aa17.49■□□□□ 0.39
TSEN54-206ENST00000579449 IGKV5-2P06315 115 aa17.49■□□□□ 0.39
TSEN54-206ENST00000579449 EN1Q05925 392 aaPredicted RBP17.49■□□□□ 0.39
TSEN54-206ENST00000579449 CWF19L2Q2TBE0 894 aaKnown RBP17.49■□□□□ 0.39
TSEN54-206ENST00000579449 SMIM5Q71RC9 77 aa17.49■□□□□ 0.39
TSEN54-206ENST00000579449 CAMKK2Q96RR4 588 aa17.49■□□□□ 0.39
TSEN54-206ENST00000579449 MEIS3Q99687 375 aa17.49■□□□□ 0.39
TSEN54-206ENST00000579449 ANKRD36CQ5JPF3 1778 aa17.48■□□□□ 0.39
TSEN54-206ENST00000579449 BCORQ6W2J9 1755 aa17.48■□□□□ 0.39
TSEN54-206ENST00000579449 NEURL1BA8MQ27 555 aa17.48■□□□□ 0.39
TSEN54-206ENST00000579449 EZH2Q15910 746 aaKnown RBP17.48■□□□□ 0.39
TSEN54-206ENST00000579449 HLFQ16534 295 aa17.48■□□□□ 0.39
TSEN54-206ENST00000579449 GIGYF2Q6Y7W6 1299 aaKnown RBP17.48■□□□□ 0.39
TSEN54-206ENST00000579449 AMIGO3Q86WK7 504 aa17.48■□□□□ 0.39
TSEN54-206ENST00000579449 ATP5J2-PTCD1G3V325 749 aa17.47■□□□□ 0.39
TSEN54-206ENST00000579449 CAMTA2O94983 1202 aa17.47■□□□□ 0.39
TSEN54-206ENST00000579449 BAG6P46379 1132 aa17.47■□□□□ 0.39
TSEN54-206ENST00000579449 TCIRG1Q13488 830 aa17.47■□□□□ 0.39
TSEN54-206ENST00000579449 USP44Q9H0E7 712 aa17.47■□□□□ 0.39
TSEN54-206ENST00000579449 C4AP0C0L4 1744 aa17.46■□□□□ 0.39
TSEN54-206ENST00000579449 TUBGCP6Q96RT7 1819 aa17.45■□□□□ 0.38
TSEN54-206ENST00000579449 IBTKQ9P2D0 1353 aaPredicted RBP17.45■□□□□ 0.38
TSEN54-206ENST00000579449 PHF14O94880 888 aa17.45■□□□□ 0.38
TSEN54-206ENST00000579449 GNAI3P08754 354 aa17.45■□□□□ 0.38
TSEN54-206ENST00000579449 HSP90AB3PQ58FF7 597 aa17.45■□□□□ 0.38
TSEN54-206ENST00000579449 B4GALNT3Q6L9W6 998 aa17.45■□□□□ 0.38
TSEN54-206ENST00000579449 DEFB132Q7Z7B7 95 aa17.45■□□□□ 0.38
TSEN54-206ENST00000579449 CCDC125Q86Z20 511 aa17.45■□□□□ 0.38
TSEN54-206ENST00000579449 ARHGEF1Q92888 912 aaKnown RBP17.45■□□□□ 0.38
TSEN54-206ENST00000579449 CCDC136Q96JN2 1154 aa17.45■□□□□ 0.38
TSEN54-206ENST00000579449 ISCA1Q9BUE6 129 aa17.45■□□□□ 0.38
TSEN54-206ENST00000579449 C1orf115Q9H7X2 142 aa17.45■□□□□ 0.38
TSEN54-206ENST00000579449 PCDHB15Q9Y5E8 787 aa17.45■□□□□ 0.38
TSEN54-206ENST00000579449 SCN7AQ01118 1682 aa17.45■□□□□ 0.38
TSEN54-206ENST00000579449 GCKRQ14397 625 aa17.44■□□□□ 0.38
TSEN54-206ENST00000579449 ZNF827Q17R98 1081 aa17.44■□□□□ 0.38
TSEN54-206ENST00000579449 TRAPPC3LQ5T215 181 aa17.44■□□□□ 0.38
TSEN54-206ENST00000579449 AKT1S1Q96B36 256 aa17.44■□□□□ 0.38
TSEN54-206ENST00000579449 C9orf78Q9NZ63 289 aaPredicted RBP17.44■□□□□ 0.38
TSEN54-206ENST00000579449 NARFQ9UHQ1 456 aa17.44■□□□□ 0.38
TSEN54-206ENST00000579449 UBTFL1P0CB47 393 aaPredicted RBP17.43■□□□□ 0.38
TSEN54-206ENST00000579449 TRIM28Q13263 835 aaKnown RBP17.43■□□□□ 0.38
TSEN54-206ENST00000579449 CCDC191Q8NCU4 936 aa17.43■□□□□ 0.38
TSEN54-206ENST00000579449 CWC25Q9NXE8 425 aaPredicted RBP17.43■□□□□ 0.38
TSEN54-206ENST00000579449 SRP68Q9UHB9 627 aaKnown RBP17.43■□□□□ 0.38
TSEN54-206ENST00000579449 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.42■□□□□ 0.38
TSEN54-206ENST00000579449 GRM8O00222 908 aa17.42■□□□□ 0.38
TSEN54-206ENST00000579449 ZPR1O75312 459 aa17.42■□□□□ 0.38
TSEN54-206ENST00000579449 GNAI2P04899 355 aa17.42■□□□□ 0.38
TSEN54-206ENST00000579449 NBPF7P0C2Y1 421 aaPredicted RBP17.42■□□□□ 0.38
TSEN54-206ENST00000579449 GPTP24298 496 aa17.42■□□□□ 0.38
TSEN54-206ENST00000579449 SSFA2P28290 1259 aa17.42■□□□□ 0.38
TSEN54-206ENST00000579449 RFC4P35249 363 aa17.42■□□□□ 0.38
TSEN54-206ENST00000579449 ZNF652Q9Y2D9 606 aa17.42■□□□□ 0.38
TSEN54-206ENST00000579449 UTYO14607 1347 aa17.42■□□□□ 0.38
TSEN54-206ENST00000579449 USPL1Q5W0Q7 1092 aa17.41■□□□□ 0.38
TSEN54-206ENST00000579449 CLEC4GQ6UXB4 293 aa17.41■□□□□ 0.38
TSEN54-206ENST00000579449 ZNF34Q8IZ26 560 aa17.41■□□□□ 0.38
TSEN54-206ENST00000579449 TFCP2L1Q9NZI6 479 aa17.41■□□□□ 0.38
TSEN54-206ENST00000579449 RGL2O15211 777 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms