RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 MASTLQ96GX5 879 aa11.48□□□□□ -0.57
CASC3-206ENST00000579238 COL11A2P13942 1736 aaPredicted RBP11.48□□□□□ -0.57
CASC3-206ENST00000579238 FER1L6Q2WGJ9 1857 aa11.48□□□□□ -0.57
CASC3-206ENST00000579238 DICER1Q9UPY3 1922 aaKnown RBP11.47□□□□□ -0.57
CASC3-206ENST00000579238 PRKAR2BP31323 418 aa11.47□□□□□ -0.57
CASC3-206ENST00000579238 CNGB1Q14028 1251 aaPredicted RBP11.47□□□□□ -0.57
CASC3-206ENST00000579238 CLEC4GQ6UXB4 293 aa11.47□□□□□ -0.57
CASC3-206ENST00000579238 PHACTR3Q96KR7 559 aa11.47□□□□□ -0.57
CASC3-206ENST00000579238 RSPH6AQ9H0K4 717 aa11.47□□□□□ -0.57
CASC3-206ENST00000579238 USP16Q9Y5T5 823 aa11.47□□□□□ -0.57
CASC3-206ENST00000579238 DDNO94850 711 aaPredicted RBP11.46□□□□□ -0.57
CASC3-206ENST00000579238 CHADLQ6NUI6 762 aa11.46□□□□□ -0.57
CASC3-206ENST00000579238 CFAP53Q96M91 514 aa11.46□□□□□ -0.57
CASC3-206ENST00000579238 ZNF652Q9Y2D9 606 aa11.46□□□□□ -0.57
CASC3-206ENST00000579238 SLX4Q8IY92 1834 aa11.45□□□□□ -0.58
CASC3-206ENST00000579238 SNRPA1P09661 255 aaKnown RBP11.45□□□□□ -0.58
CASC3-206ENST00000579238 NBPF5PQ86XG9 351 aaPredicted RBP11.45□□□□□ -0.58
CASC3-206ENST00000579238 RTF1Q92541 710 aaKnown RBP11.45□□□□□ -0.58
CASC3-206ENST00000579238 CREBZFQ9NS37 354 aa11.45□□□□□ -0.58
CASC3-206ENST00000579238 NUDCQ9Y266 331 aa11.45□□□□□ -0.58
CASC3-206ENST00000579238 BCORQ6W2J9 1755 aa11.45□□□□□ -0.58
CASC3-206ENST00000579238 PRAMEF22A3QJZ6 481 aa11.44□□□□□ -0.58
CASC3-206ENST00000579238 IQCA1LA6NCM1 817 aa11.44□□□□□ -0.58
CASC3-206ENST00000579238 RGL2O15211 777 aa11.44□□□□□ -0.58
CASC3-206ENST00000579238 CAPN15O75808 1086 aa11.44□□□□□ -0.58
CASC3-206ENST00000579238 NPR1P16066 1061 aa11.44□□□□□ -0.58
CASC3-206ENST00000579238 PIP4K2AP48426 406 aaPredicted RBP11.44□□□□□ -0.58
CASC3-206ENST00000579238 CCDC93Q567U6 631 aa11.44□□□□□ -0.58
CASC3-206ENST00000579238 C7orf43Q8WVR3 580 aa11.44□□□□□ -0.58
CASC3-206ENST00000579238 KLRG2A4D1S0 409 aaPredicted RBP11.43□□□□□ -0.58
CASC3-206ENST00000579238 POTEIP0CG38 1075 aa11.43□□□□□ -0.58
CASC3-206ENST00000579238 POTEJP0CG39 1038 aa11.43□□□□□ -0.58
CASC3-206ENST00000579238 TPTE2Q6XPS3 522 aa11.43□□□□□ -0.58
CASC3-206ENST00000579238 LDHDQ86WU2 507 aa11.43□□□□□ -0.58
CASC3-206ENST00000579238 L3MBTL3Q96JM7 780 aaPredicted RBP11.43□□□□□ -0.58
CASC3-206ENST00000579238 ARFGEF2Q9Y6D5 1785 aa11.43□□□□□ -0.58
CASC3-206ENST00000579238 HTATSF1O43719 755 aaKnown RBP11.42□□□□□ -0.58
CASC3-206ENST00000579238 U2AF1L5P0DN76 240 aaPredicted RBP11.42□□□□□ -0.58
CASC3-206ENST00000579238 U2AF1Q01081 240 aaKnown RBP eCLIP11.42□□□□□ -0.582e-9■■□□□ 12.5
CASC3-206ENST00000579238 FKBP4Q02790 459 aaKnown RBP eCLIP11.42□□□□□ -0.58
CASC3-206ENST00000579238 MCM10Q7L590 875 aa11.42□□□□□ -0.58
CASC3-206ENST00000579238 TAF1DQ9H5J8 278 aaPredicted RBP11.42□□□□□ -0.58
CASC3-206ENST00000579238 MKRN1Q9UHC7 482 aaKnown RBP11.42□□□□□ -0.58
CASC3-206ENST00000579238 NIP7Q9Y221 180 aaKnown RBP eCLIP11.42□□□□□ -0.58
CASC3-206ENST00000579238 PASKQ96RG2 1323 aa11.41□□□□□ -0.58
CASC3-206ENST00000579238 CACNA1SQ13698 1873 aa11.41□□□□□ -0.58
CASC3-206ENST00000579238 NBPF26B4DH59 902 aa11.41□□□□□ -0.58
CASC3-206ENST00000579238 NBPF10Q6P3W6 841 aaKnown RBP11.41□□□□□ -0.58
CASC3-206ENST00000579238 RTKN2Q8IZC4 609 aa11.41□□□□□ -0.58
CASC3-206ENST00000579238 NBPF15Q8N660 670 aa11.41□□□□□ -0.58
CASC3-206ENST00000579238 CNTNAP1P78357 1384 aa11.41□□□□□ -0.58
CASC3-206ENST00000579238 ALDH1B1P30837 517 aa11.4□□□□□ -0.58
CASC3-206ENST00000579238 DCTN1Q14203 1278 aa11.4□□□□□ -0.58
CASC3-206ENST00000579238 ZNF277Q9NRM2 450 aaPredicted RBP11.4□□□□□ -0.58
CASC3-206ENST00000579238 SCN4AP35499 1836 aa11.39□□□□□ -0.59
CASC3-206ENST00000579238 ZNF541Q9H0D2 1346 aa11.39□□□□□ -0.59
CASC3-206ENST00000579238 FAM177BA6PVY3 158 aa11.39□□□□□ -0.59
CASC3-206ENST00000579238 PPP2R1AP30153 589 aa11.39□□□□□ -0.59
CASC3-206ENST00000579238 TAF7Q15545 349 aaPredicted RBP11.39□□□□□ -0.59
CASC3-206ENST00000579238 HLFQ16534 295 aa11.39□□□□□ -0.59
CASC3-206ENST00000579238 HACL1Q9UJ83 578 aa11.39□□□□□ -0.59
CASC3-206ENST00000579238 TMEM88BA6NKF7 163 aa11.38□□□□□ -0.59
CASC3-206ENST00000579238 FZD9O00144 591 aa11.38□□□□□ -0.59
CASC3-206ENST00000579238 ITGBL1O95965 494 aaPredicted RBP11.38□□□□□ -0.59
CASC3-206ENST00000579238 GTF2E1P29083 439 aaPredicted RBP11.38□□□□□ -0.59
CASC3-206ENST00000579238 IARSP41252 1262 aaKnown RBP11.38□□□□□ -0.59
CASC3-206ENST00000579238 EAPPQ56P03 285 aaPredicted RBP11.38□□□□□ -0.59
CASC3-206ENST00000579238 OLFM4Q6UX06 510 aa11.38□□□□□ -0.59
CASC3-206ENST00000579238 SYNE4Q8N205 404 aa11.38□□□□□ -0.59
CASC3-206ENST00000579238 NYXQ9GZU5 481 aa11.38□□□□□ -0.59
CASC3-206ENST00000579238 ERVV-1B6SEH8 477 aa11.37□□□□□ -0.59
CASC3-206ENST00000579238 EPHX2P34913 555 aa11.37□□□□□ -0.59
CASC3-206ENST00000579238 CRY2Q49AN0 593 aa11.37□□□□□ -0.59
CASC3-206ENST00000579238 PNMA8AQ86V59 439 aaPredicted RBP11.37□□□□□ -0.59
CASC3-206ENST00000579238 PSMD1Q99460 953 aa11.37□□□□□ -0.59
CASC3-206ENST00000579238 FOXN1O15353 648 aa11.36□□□□□ -0.59
CASC3-206ENST00000579238 VEGFBP49765 207 aa11.36□□□□□ -0.59
CASC3-206ENST00000579238 CC2D2BQ6DHV5 1058 aa11.36□□□□□ -0.59
CASC3-206ENST00000579238 GPC2Q8N158 579 aa11.36□□□□□ -0.59
CASC3-206ENST00000579238 PNISRQ8TF01 805 aaKnown RBP11.36□□□□□ -0.59
CASC3-206ENST00000579238 PRDM10Q9NQV6 1147 aa11.36□□□□□ -0.59
CASC3-206ENST00000579238 MIS18AQ9NYP9 233 aa11.36□□□□□ -0.59
CASC3-206ENST00000579238 CLEC11AQ9Y240 323 aa11.36□□□□□ -0.59
CASC3-206ENST00000579238 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
CASC3-206ENST00000579238 MAP3K15Q6ZN16 1313 aa11.35□□□□□ -0.59
CASC3-206ENST00000579238 SNED1Q8TER0 1413 aa11.35□□□□□ -0.59
CASC3-206ENST00000579238 NEFMP07197 916 aa11.35□□□□□ -0.59
CASC3-206ENST00000579238 CTCFP49711 727 aaPredicted RBP11.35□□□□□ -0.59
CASC3-206ENST00000579238 GRIPAP1Q4V328 841 aa11.35□□□□□ -0.59
CASC3-206ENST00000579238 NUTM1Q86Y26 1132 aa11.35□□□□□ -0.59
CASC3-206ENST00000579238 CNTROBQ8N137 903 aa11.35□□□□□ -0.59
CASC3-206ENST00000579238 NGEFQ8N5V2 710 aa11.35□□□□□ -0.59
CASC3-206ENST00000579238 JDP2Q8WYK2 163 aa11.35□□□□□ -0.59
CASC3-206ENST00000579238 AIDAQ96BJ3 306 aa11.35□□□□□ -0.59
CASC3-206ENST00000579238 ABCC12Q96J65 1359 aa11.35□□□□□ -0.59
CASC3-206ENST00000579238 LAMB4A4D0S4 1761 aa11.34□□□□□ -0.59
CASC3-206ENST00000579238 ADAMTSL1Q8N6G6 1762 aa11.34□□□□□ -0.59
CASC3-206ENST00000579238 IBTKQ9P2D0 1353 aaPredicted RBP11.34□□□□□ -0.59
CASC3-206ENST00000579238 HOXA10P31260 410 aaPredicted RBP11.34□□□□□ -0.59
CASC3-206ENST00000579238 EIF6P56537 245 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms