RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 DNAJC5GQ8N7S2 189 aa11.88□□□□□ -0.51
GGA3-207ENST00000578896 PCNTO95613 3336 aa11.88□□□□□ -0.51
GGA3-207ENST00000578896 BCORQ6W2J9 1755 aa11.87□□□□□ -0.51
GGA3-207ENST00000578896 ST5P78524 1137 aa11.87□□□□□ -0.51
GGA3-207ENST00000578896 NBPF5PQ86XG9 351 aaPredicted RBP11.87□□□□□ -0.51
GGA3-207ENST00000578896 GLTPD2A6NH11 291 aa11.86□□□□□ -0.51
GGA3-207ENST00000578896 HTATSF1O43719 755 aaKnown RBP11.86□□□□□ -0.51
GGA3-207ENST00000578896 SRGNP10124 158 aa11.86□□□□□ -0.51
GGA3-207ENST00000578896 OLFM4Q6UX06 510 aa11.86□□□□□ -0.51
GGA3-207ENST00000578896 PLEKHF1Q96S99 279 aa11.86□□□□□ -0.51
GGA3-207ENST00000578896 NIP7Q9Y221 180 aaKnown RBP eCLIP11.86□□□□□ -0.51
GGA3-207ENST00000578896 FER1L6Q2WGJ9 1857 aa11.85□□□□□ -0.51
GGA3-207ENST00000578896 POTECB2RU33 542 aa11.85□□□□□ -0.51
GGA3-207ENST00000578896 ERFEQ4G0M1 354 aa11.85□□□□□ -0.51
GGA3-207ENST00000578896 PRPF40BQ6NWY9 871 aaKnown RBP11.85□□□□□ -0.51
GGA3-207ENST00000578896 MASTLQ96GX5 879 aa11.85□□□□□ -0.51
GGA3-207ENST00000578896 RRP7AQ9Y3A4 280 aaKnown RBP11.85□□□□□ -0.51
GGA3-207ENST00000578896 TIAM2Q8IVF5 1701 aa11.85□□□□□ -0.51
GGA3-207ENST00000578896 TNRC6CQ9HCJ0 1690 aaKnown RBP11.84□□□□□ -0.51
GGA3-207ENST00000578896 DICER1Q9UPY3 1922 aaKnown RBP11.84□□□□□ -0.51
GGA3-207ENST00000578896 WDR90Q96KV7 1748 aa11.84□□□□□ -0.51
GGA3-207ENST00000578896 NEFMP07197 916 aa11.84□□□□□ -0.51
GGA3-207ENST00000578896 MYL6BP14649 208 aa11.84□□□□□ -0.51
GGA3-207ENST00000578896 VEGFAP15692 232 aaPredicted RBP11.84□□□□□ -0.51
GGA3-207ENST00000578896 FSTL1Q12841 308 aa11.84□□□□□ -0.51
GGA3-207ENST00000578896 NFE2L2Q16236 605 aa11.84□□□□□ -0.51
GGA3-207ENST00000578896 STYK1Q6J9G0 422 aa11.84□□□□□ -0.51
GGA3-207ENST00000578896 CLEC4GQ6UXB4 293 aa11.84□□□□□ -0.51
GGA3-207ENST00000578896 TTLL7Q6ZT98 887 aa11.84□□□□□ -0.51
GGA3-207ENST00000578896 CNKSR1Q969H4 720 aa11.84□□□□□ -0.51
GGA3-207ENST00000578896 DDNO94850 711 aaPredicted RBP11.83□□□□□ -0.52
GGA3-207ENST00000578896 EIF4A1P60842 406 aaKnown RBP11.83□□□□□ -0.52
GGA3-207ENST00000578896 IFFO2Q5TF58 517 aa11.83□□□□□ -0.52
GGA3-207ENST00000578896 NUTM1Q86Y26 1132 aa11.83□□□□□ -0.52
GGA3-207ENST00000578896 TAOK3Q9H2K8 898 aa11.83□□□□□ -0.52
GGA3-207ENST00000578896 PDZRN3Q9UPQ7 1066 aa11.83□□□□□ -0.52
GGA3-207ENST00000578896 ZNF652Q9Y2D9 606 aa11.83□□□□□ -0.52
GGA3-207ENST00000578896 NUP98P52948 1817 aa11.82□□□□□ -0.52
GGA3-207ENST00000578896 GPTP24298 496 aa11.82□□□□□ -0.52
GGA3-207ENST00000578896 TPTE2Q6XPS3 522 aa11.82□□□□□ -0.52
GGA3-207ENST00000578896 SMC1BQ8NDV3 1235 aa11.82□□□□□ -0.52
GGA3-207ENST00000578896 C7orf43Q8WVR3 580 aa11.82□□□□□ -0.52
GGA3-207ENST00000578896 ZC3H4Q9UPT8 1303 aaKnown RBP11.82□□□□□ -0.52
GGA3-207ENST00000578896 KDM3BQ7LBC6 1761 aa11.82□□□□□ -0.52
GGA3-207ENST00000578896 POTEIP0CG38 1075 aa11.81□□□□□ -0.52
GGA3-207ENST00000578896 POTEJP0CG39 1038 aa11.81□□□□□ -0.52
GGA3-207ENST00000578896 GTF2E1P29083 439 aaPredicted RBP11.81□□□□□ -0.52
GGA3-207ENST00000578896 DDX10Q13206 875 aaKnown RBP11.81□□□□□ -0.52
GGA3-207ENST00000578896 DPY19L2Q6NUT2 758 aa11.81□□□□□ -0.52
GGA3-207ENST00000578896 SLC51AQ86UW1 340 aa11.81□□□□□ -0.52
GGA3-207ENST00000578896 PNISRQ8TF01 805 aaKnown RBP11.81□□□□□ -0.52
GGA3-207ENST00000578896 KLRG1Q96E93 195 aa11.81□□□□□ -0.52
GGA3-207ENST00000578896 ZBTB3Q9H5J0 574 aa11.81□□□□□ -0.52
GGA3-207ENST00000578896 ZNF277Q9NRM2 450 aaPredicted RBP11.81□□□□□ -0.52
GGA3-207ENST00000578896 MAPK8IP3Q9UPT6 1336 aa11.81□□□□□ -0.52
GGA3-207ENST00000578896 LAMB4A4D0S4 1761 aa11.8□□□□□ -0.52
GGA3-207ENST00000578896 ANXA1P04083 346 aa11.8□□□□□ -0.52
GGA3-207ENST00000578896 NPR1P16066 1061 aa11.8□□□□□ -0.52
GGA3-207ENST00000578896 EIF2S2P20042 333 aaKnown RBP11.8□□□□□ -0.52
GGA3-207ENST00000578896 RIPK4P57078 832 aa11.8□□□□□ -0.52
GGA3-207ENST00000578896 CCDC146Q8IYE0 955 aa11.8□□□□□ -0.52
GGA3-207ENST00000578896 ABCC12Q96J65 1359 aa11.79□□□□□ -0.52
GGA3-207ENST00000578896 ARFGEF2Q9Y6D5 1785 aa11.79□□□□□ -0.52
GGA3-207ENST00000578896 KLRG2A4D1S0 409 aaPredicted RBP11.79□□□□□ -0.52
GGA3-207ENST00000578896 TCERG1O14776 1098 aaKnown RBP11.79□□□□□ -0.52
GGA3-207ENST00000578896 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
GGA3-207ENST00000578896 CCDC93Q567U6 631 aa11.79□□□□□ -0.52
GGA3-207ENST00000578896 NECTIN2Q92692 538 aa11.79□□□□□ -0.52
GGA3-207ENST00000578896 TSPYL4Q9UJ04 414 aa11.79□□□□□ -0.52
GGA3-207ENST00000578896 MAP3K15Q6ZN16 1313 aa11.79□□□□□ -0.52
GGA3-207ENST00000578896 LTBP3Q9NS15 1303 aa11.79□□□□□ -0.52
GGA3-207ENST00000578896 PROSER3Q2NL68 480 aa11.78□□□□□ -0.52
GGA3-207ENST00000578896 SUSD4Q5VX71 490 aa11.78□□□□□ -0.52
GGA3-207ENST00000578896 KIF6Q6ZMV9 814 aa11.78□□□□□ -0.52
GGA3-207ENST00000578896 C3orf67Q6ZVT6 689 aa11.78□□□□□ -0.52
GGA3-207ENST00000578896 ZNF428Q96B54 188 aa11.78□□□□□ -0.52
GGA3-207ENST00000578896 UBN2Q6ZU65 1347 aa11.78□□□□□ -0.52
GGA3-207ENST00000578896 ZNF541Q9H0D2 1346 aa11.78□□□□□ -0.52
GGA3-207ENST00000578896 FKBP4Q02790 459 aaKnown RBP eCLIP11.77□□□□□ -0.53
GGA3-207ENST00000578896 SOGA3Q5TF21 947 aa11.77□□□□□ -0.53
GGA3-207ENST00000578896 SYNE4Q8N205 404 aa11.77□□□□□ -0.53
GGA3-207ENST00000578896 ERVV-1B6SEH8 477 aa11.76□□□□□ -0.53
GGA3-207ENST00000578896 TMPOP42166 694 aaKnown RBP11.76□□□□□ -0.53
GGA3-207ENST00000578896 PDIA6Q15084 440 aa11.76□□□□□ -0.53
GGA3-207ENST00000578896 KRT24Q2M2I5 525 aa11.76□□□□□ -0.53
GGA3-207ENST00000578896 PNNQ9H307 717 aaKnown RBP11.76□□□□□ -0.53
GGA3-207ENST00000578896 RGL2O15211 777 aa11.75□□□□□ -0.53
GGA3-207ENST00000578896 ALDH1B1P30837 517 aa11.75□□□□□ -0.53
GGA3-207ENST00000578896 AIMP1Q12904 312 aaKnown RBP11.75□□□□□ -0.53
GGA3-207ENST00000578896 RALBP1Q15311 655 aa11.75□□□□□ -0.53
GGA3-207ENST00000578896 CHADLQ6NUI6 762 aa11.75□□□□□ -0.53
GGA3-207ENST00000578896 LRP10Q7Z4F1 713 aa11.75□□□□□ -0.53
GGA3-207ENST00000578896 ZNF34Q8IZ26 560 aa11.75□□□□□ -0.53
GGA3-207ENST00000578896 JMYQ8N9B5 988 aa11.75□□□□□ -0.53
GGA3-207ENST00000578896 NYXQ9GZU5 481 aa11.75□□□□□ -0.53
GGA3-207ENST00000578896 LAS1LQ9Y4W2 734 aaKnown RBP11.75□□□□□ -0.53
GGA3-207ENST00000578896 NTSR2O95665 410 aa11.74□□□□□ -0.53
GGA3-207ENST00000578896 IARSP41252 1262 aaKnown RBP11.74□□□□□ -0.53
GGA3-207ENST00000578896 CRY2Q49AN0 593 aa11.74□□□□□ -0.53
GGA3-207ENST00000578896 EAPPQ56P03 285 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms